RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 LINC01387J3KSC0 135 aa12.35□□□□□ -0.43
ITGB4-202ENST00000449880 GPR37O15354 613 aa12.35□□□□□ -0.43
ITGB4-202ENST00000449880 THSD4Q6ZMP0 1018 aa12.35□□□□□ -0.43
ITGB4-202ENST00000449880 MS4A3Q96HJ5 214 aa12.35□□□□□ -0.43
ITGB4-202ENST00000449880 AMDHD2Q9Y303 409 aa12.35□□□□□ -0.43
ITGB4-202ENST00000449880 SERTM2A0A1B0GWG4 89 aa12.35□□□□□ -0.43
ITGB4-202ENST00000449880 LMO7DNF2Z398 122 aa12.35□□□□□ -0.43
ITGB4-202ENST00000449880 PDCD6O75340 191 aa12.35□□□□□ -0.43
ITGB4-202ENST00000449880 FAHP16930 419 aa12.35□□□□□ -0.43
ITGB4-202ENST00000449880 GNB1P62873 340 aa12.35□□□□□ -0.43
ITGB4-202ENST00000449880 C21orf62-AS1Q17RA5 79 aa12.35□□□□□ -0.43
ITGB4-202ENST00000449880 C20orf196Q8IYI0 205 aa12.35□□□□□ -0.43
ITGB4-202ENST00000449880 STARD4Q96DR4 205 aa12.35□□□□□ -0.43
ITGB4-202ENST00000449880 TMEM167BQ9NRX6 74 aa12.35□□□□□ -0.43
ITGB4-202ENST00000449880 IL17BQ9UHF5 180 aa12.35□□□□□ -0.43
ITGB4-202ENST00000449880 SIRPB1O00241 398 aa12.35□□□□□ -0.43
ITGB4-202ENST00000449880 ZBTB25P24278 435 aa12.35□□□□□ -0.43
ITGB4-202ENST00000449880 ZNF117Q03924 483 aa12.35□□□□□ -0.43
ITGB4-202ENST00000449880 RDH5Q92781 318 aa12.35□□□□□ -0.43
ITGB4-202ENST00000449880 COMMD5Q9GZQ3 224 aa12.35□□□□□ -0.43
ITGB4-202ENST00000449880 NPIPB9F8W1W9 429 aa12.34□□□□□ -0.43
ITGB4-202ENST00000449880 PPM1DO15297 605 aa12.34□□□□□ -0.43
ITGB4-202ENST00000449880 HOXA6P31267 233 aa12.34□□□□□ -0.43
ITGB4-202ENST00000449880 CHRNA7P36544 502 aa12.34□□□□□ -0.43
ITGB4-202ENST00000449880 TEX30Q5JUR7 227 aa12.34□□□□□ -0.43
ITGB4-202ENST00000449880 LDLRAD3Q86YD5 345 aa12.34□□□□□ -0.43
ITGB4-202ENST00000449880 H1FOOQ8IZA3 346 aaPredicted RBP12.34□□□□□ -0.43
ITGB4-202ENST00000449880 CNTRLQ7Z7A1 2325 aa12.34□□□□□ -0.43
ITGB4-202ENST00000449880 TMEM30CPA0ZSE6 113 aa12.34□□□□□ -0.43
ITGB4-202ENST00000449880 H3BP45 60 aa12.34□□□□□ -0.43
ITGB4-202ENST00000449880 HSPB1P04792 205 aaKnown RBP12.34□□□□□ -0.43
ITGB4-202ENST00000449880 PGA4P0DJD7 388 aa12.34□□□□□ -0.43
ITGB4-202ENST00000449880 PGA5P0DJD9 388 aa12.34□□□□□ -0.43
ITGB4-202ENST00000449880 CDKN2AP42771 156 aaKnown RBP12.34□□□□□ -0.43
ITGB4-202ENST00000449880 EIF3IQ13347 325 aaKnown RBP12.34□□□□□ -0.43
ITGB4-202ENST00000449880 ZNF793Q6ZN11 406 aa12.34□□□□□ -0.43
ITGB4-202ENST00000449880 MRGPREQ86SM8 312 aa12.34□□□□□ -0.43
ITGB4-202ENST00000449880 ZNF738Q8NE65 137 aa12.34□□□□□ -0.43
ITGB4-202ENST00000449880 MCHR2Q969V1 340 aa12.34□□□□□ -0.43
ITGB4-202ENST00000449880 POM121L2Q96KW2 1035 aa12.34□□□□□ -0.43
ITGB4-202ENST00000449880 CLEC1BQ9P126 229 aa12.34□□□□□ -0.43
ITGB4-202ENST00000449880 DAOP14920 347 aa12.34□□□□□ -0.43
ITGB4-202ENST00000449880 FCARP24071 287 aa12.34□□□□□ -0.43
ITGB4-202ENST00000449880 HAAOP46952 286 aa12.34□□□□□ -0.43
ITGB4-202ENST00000449880 EWSR1Q01844 656 aaKnown RBP eCLIP12.34□□□□□ -0.43
ITGB4-202ENST00000449880 KISS1RQ969F8 398 aaPredicted RBP12.34□□□□□ -0.43
ITGB4-202ENST00000449880 A0A1B0GTQ1 180 aa12.34□□□□□ -0.43
ITGB4-202ENST00000449880 B2MP61769 119 aa12.34□□□□□ -0.43
ITGB4-202ENST00000449880 OR4B1Q8NGF8 309 aa12.34□□□□□ -0.43
ITGB4-202ENST00000449880 GMPPAQ96IJ6 420 aaPredicted RBP12.34□□□□□ -0.43
ITGB4-202ENST00000449880 RPP25Q9BUL9 199 aaKnown RBP12.34□□□□□ -0.43
ITGB4-202ENST00000449880 FRRS1LQ9P0K9 344 aa12.34□□□□□ -0.43
ITGB4-202ENST00000449880 A0A096LPE4 126 aa12.33□□□□□ -0.43
ITGB4-202ENST00000449880 A0A1W2PPZ6 126 aa12.33□□□□□ -0.43
ITGB4-202ENST00000449880 M0R2Z0 102 aa12.33□□□□□ -0.43
ITGB4-202ENST00000449880 OR5I1Q13606 314 aa12.33□□□□□ -0.43
ITGB4-202ENST00000449880 MPV17LQ2QL34 196 aa12.33□□□□□ -0.43
ITGB4-202ENST00000449880 OR2V1Q8NHB1 315 aa12.33□□□□□ -0.43
ITGB4-202ENST00000449880 ANXA10Q9UJ72 324 aa12.33□□□□□ -0.43
ITGB4-202ENST00000449880 STARD10Q9Y365 291 aa12.33□□□□□ -0.43
ITGB4-202ENST00000449880 OR5G3P0C626 314 aa12.33□□□□□ -0.44
ITGB4-202ENST00000449880 VSIG10L2P0DP72 767 aa12.33□□□□□ -0.44
ITGB4-202ENST00000449880 GABRG2P18507 467 aa12.33□□□□□ -0.44
ITGB4-202ENST00000449880 ZIC1Q15915 447 aa12.33□□□□□ -0.44
ITGB4-202ENST00000449880 OR1F12Q8NHA8 337 aa12.33□□□□□ -0.44
ITGB4-202ENST00000449880 TRMT61AQ96FX7 289 aaKnown RBP12.33□□□□□ -0.44
ITGB4-202ENST00000449880 SLC52A3Q9NQ40 469 aa12.33□□□□□ -0.44
ITGB4-202ENST00000449880 FUT9Q9Y231 359 aa12.33□□□□□ -0.44
ITGB4-202ENST00000449880 GEMIN2O14893 280 aaKnown RBP12.33□□□□□ -0.44
ITGB4-202ENST00000449880 RPS16P62249 146 aaKnown RBP12.33□□□□□ -0.44
ITGB4-202ENST00000449880 INSM1Q01101 510 aaPredicted RBP12.33□□□□□ -0.44
ITGB4-202ENST00000449880 PAX5Q02548 391 aa12.33□□□□□ -0.44
ITGB4-202ENST00000449880 PRICKLE4Q2TBC4 344 aa12.33□□□□□ -0.44
ITGB4-202ENST00000449880 FBXL14Q8N1E6 418 aa12.33□□□□□ -0.44
ITGB4-202ENST00000449880 OR11G2Q8NGC1 345 aa12.33□□□□□ -0.44
ITGB4-202ENST00000449880 OR10V1Q8NGI7 309 aa12.33□□□□□ -0.44
ITGB4-202ENST00000449880 NAGKQ9UJ70 344 aa12.33□□□□□ -0.44
ITGB4-202ENST00000449880 TRAV17A0A0B4J275 112 aa12.33□□□□□ -0.44
ITGB4-202ENST00000449880 OR4C45A6NMZ5 311 aa12.33□□□□□ -0.44
ITGB4-202ENST00000449880 SPRY1O43609 319 aaPredicted RBP12.33□□□□□ -0.44
ITGB4-202ENST00000449880 NHLH1Q02575 133 aa12.33□□□□□ -0.44
ITGB4-202ENST00000449880 GFRALQ6UXV0 394 aa12.33□□□□□ -0.44
ITGB4-202ENST00000449880 ZNF547Q8IVP9 402 aa12.33□□□□□ -0.44
ITGB4-202ENST00000449880 APOBEC3DQ96AK3 386 aaPredicted RBP12.33□□□□□ -0.44
ITGB4-202ENST00000449880 COX14Q96I36 57 aa12.33□□□□□ -0.44
ITGB4-202ENST00000449880 ABHD14BQ96IU4 210 aa12.33□□□□□ -0.44
ITGB4-202ENST00000449880 RCC2Q9P258 522 aaKnown RBP12.33□□□□□ -0.44
ITGB4-202ENST00000449880 SPTY2D1-AS1A0A0U1RR47 76 aa12.33□□□□□ -0.44
ITGB4-202ENST00000449880 SH2D7A6NKC9 451 aaPredicted RBP12.33□□□□□ -0.44
ITGB4-202ENST00000449880 C5orf67F2Z3F1 127 aa12.33□□□□□ -0.44
ITGB4-202ENST00000449880 CTSVO60911 334 aa12.33□□□□□ -0.44
ITGB4-202ENST00000449880 GFERP55789 205 aa12.33□□□□□ -0.44
ITGB4-202ENST00000449880 TRA2AQ13595 282 aaKnown RBP eCLIP12.33□□□□□ -0.44
ITGB4-202ENST00000449880 TCF21O43680 179 aa12.32□□□□□ -0.44
ITGB4-202ENST00000449880 VDAC1P21796 283 aa12.32□□□□□ -0.44
ITGB4-202ENST00000449880 NPEPL1Q8NDH3 523 aa12.32□□□□□ -0.44
ITGB4-202ENST00000449880 ZDHHC16Q969W1 377 aa12.32□□□□□ -0.44
ITGB4-202ENST00000449880 ICAM5Q9UMF0 924 aa12.32□□□□□ -0.44
ITGB4-202ENST00000449880 CARHSP1Q9Y2V2 147 aaKnown RBP12.32□□□□□ -0.44
ITGB4-202ENST00000449880 PLXNA1Q9UIW2 1896 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms