RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 KRASP01116 189 aa10.88□□□□□ -0.67
UBE3B-204ENST00000449510 OR8U8P0C7N1 319 aa10.88□□□□□ -0.67
UBE3B-204ENST00000449510 TCN2P20062 427 aa10.88□□□□□ -0.67
UBE3B-204ENST00000449510 NTF3P20783 257 aa10.88□□□□□ -0.67
UBE3B-204ENST00000449510 ZNF133P52736 654 aaPredicted RBP10.88□□□□□ -0.67
UBE3B-204ENST00000449510 GRB2P62993 217 aaKnown RBP10.88□□□□□ -0.67
UBE3B-204ENST00000449510 OR8G1Q15617 311 aa10.88□□□□□ -0.67
UBE3B-204ENST00000449510 PNLIPRP3Q17RR3 467 aa10.88□□□□□ -0.67
UBE3B-204ENST00000449510 GNPNAT1Q96EK6 184 aaPredicted RBP10.88□□□□□ -0.67
UBE3B-204ENST00000449510 PTRH2Q9Y3E5 179 aaKnown RBP10.88□□□□□ -0.67
UBE3B-204ENST00000449510 SCRG1O75711 98 aa10.88□□□□□ -0.67
UBE3B-204ENST00000449510 PSMB3P49720 205 aa10.88□□□□□ -0.67
UBE3B-204ENST00000449510 PLP2Q04941 152 aa10.88□□□□□ -0.67
UBE3B-204ENST00000449510 PYY3Q5JQD4 70 aa10.88□□□□□ -0.67
UBE3B-204ENST00000449510 TXN2Q99757 166 aa10.88□□□□□ -0.67
UBE3B-204ENST00000449510 ARV1Q9H2C2 271 aa10.88□□□□□ -0.67
UBE3B-204ENST00000449510 C3orf85A0A1B0GTC6 90 aa10.88□□□□□ -0.67
UBE3B-204ENST00000449510 H0Y8G0 127 aa10.88□□□□□ -0.67
UBE3B-204ENST00000449510 DEDDO75618 318 aa10.88□□□□□ -0.67
UBE3B-204ENST00000449510 PRF1P14222 555 aa10.88□□□□□ -0.67
UBE3B-204ENST00000449510 CDX1P47902 265 aaPredicted RBP10.88□□□□□ -0.67
UBE3B-204ENST00000449510 RPS23P62266 143 aaKnown RBP10.88□□□□□ -0.67
UBE3B-204ENST00000449510 KHDC3LQ587J8 217 aa10.88□□□□□ -0.67
UBE3B-204ENST00000449510 TIPARPQ7Z3E1 657 aaKnown RBP10.88□□□□□ -0.67
UBE3B-204ENST00000449510 ASB10Q8WXI3 467 aa10.88□□□□□ -0.67
UBE3B-204ENST00000449510 TMEM230Q96A57 120 aa10.88□□□□□ -0.67
UBE3B-204ENST00000449510 TMEM204Q9BSN7 226 aa10.88□□□□□ -0.67
UBE3B-204ENST00000449510 ELOVL1Q9BW60 279 aa10.88□□□□□ -0.67
UBE3B-204ENST00000449510 CYTL1Q9NRR1 136 aa10.88□□□□□ -0.67
UBE3B-204ENST00000449510 CBLN4Q9NTU7 201 aa10.88□□□□□ -0.67
UBE3B-204ENST00000449510 TREM2Q9NZC2 230 aa10.88□□□□□ -0.67
UBE3B-204ENST00000449510 PCOLCE2Q9UKZ9 415 aa10.88□□□□□ -0.67
UBE3B-204ENST00000449510 RALGAPA1Q6GYQ0 2036 aa10.88□□□□□ -0.67
UBE3B-204ENST00000449510 SPTY2D1-AS1A0A0U1RR47 76 aa10.87□□□□□ -0.67
UBE3B-204ENST00000449510 P2RY1P47900 373 aa10.87□□□□□ -0.67
UBE3B-204ENST00000449510 C1orf100Q5SVJ3 147 aa10.87□□□□□ -0.67
UBE3B-204ENST00000449510 OSR2Q8N2R0 312 aa10.87□□□□□ -0.67
UBE3B-204ENST00000449510 OR1N1Q8NGS0 311 aa10.87□□□□□ -0.67
UBE3B-204ENST00000449510 CCNL2Q96S94 520 aaPredicted RBP10.87□□□□□ -0.67
UBE3B-204ENST00000449510 GPX7Q96SL4 187 aaPredicted RBP10.87□□□□□ -0.67
UBE3B-204ENST00000449510 RTBDNQ9BSG5 229 aaPredicted RBP10.87□□□□□ -0.67
UBE3B-204ENST00000449510 BARX1Q9HBU1 254 aaPredicted RBP10.87□□□□□ -0.67
UBE3B-204ENST00000449510 IGKV1D-8A0A087WSZ0 117 aa10.87□□□□□ -0.67
UBE3B-204ENST00000449510 TNFSF14O43557 240 aa10.87□□□□□ -0.67
UBE3B-204ENST00000449510 ROM1Q03395 351 aa10.87□□□□□ -0.67
UBE3B-204ENST00000449510 SHBQ15464 509 aa10.87□□□□□ -0.67
UBE3B-204ENST00000449510 TMEM240Q5SV17 173 aa10.87□□□□□ -0.67
UBE3B-204ENST00000449510 CDPF1Q6NVV7 123 aa10.87□□□□□ -0.67
UBE3B-204ENST00000449510 C5orf24Q7Z6I8 188 aa10.87□□□□□ -0.67
UBE3B-204ENST00000449510 POC1AQ8NBT0 407 aa10.87□□□□□ -0.67
UBE3B-204ENST00000449510 TMEM18Q96B42 140 aa10.87□□□□□ -0.67
UBE3B-204ENST00000449510 UCN2Q96RP3 112 aa10.87□□□□□ -0.67
UBE3B-204ENST00000449510 UTP23Q9BRU9 249 aaKnown RBP10.87□□□□□ -0.67
UBE3B-204ENST00000449510 ERRFI1Q9UJM3 462 aaPredicted RBP10.87□□□□□ -0.67
UBE3B-204ENST00000449510 MMACHCQ9Y4U1 282 aa10.87□□□□□ -0.67
UBE3B-204ENST00000449510 GABRG2P18507 467 aa10.87□□□□□ -0.67
UBE3B-204ENST00000449510 KRTDAPP60985 99 aa10.87□□□□□ -0.67
UBE3B-204ENST00000449510 HTD2P86397 168 aa10.87□□□□□ -0.67
UBE3B-204ENST00000449510 FHL1Q13642 323 aa10.87□□□□□ -0.67
UBE3B-204ENST00000449510 KIAA0895LQ68EN5 471 aa10.87□□□□□ -0.67
UBE3B-204ENST00000449510 OR1L3Q8NH93 324 aa10.87□□□□□ -0.67
UBE3B-204ENST00000449510 LMAN1LQ9HAT1 526 aa10.87□□□□□ -0.67
UBE3B-204ENST00000449510 PLA2G3Q9NZ20 509 aa10.87□□□□□ -0.67
UBE3B-204ENST00000449510 PSENENQ9NZ42 101 aa10.87□□□□□ -0.67
UBE3B-204ENST00000449510 DMRT1Q9Y5R6 373 aa10.87□□□□□ -0.67
UBE3B-204ENST00000449510 FGF16O43320 207 aa10.86□□□□□ -0.67
UBE3B-204ENST00000449510 IGHV3-13P01766 116 aa10.86□□□□□ -0.67
UBE3B-204ENST00000449510 IGHV3-7P01780 117 aa10.86□□□□□ -0.67
UBE3B-204ENST00000449510 SEC11BP0C7V7 166 aa10.86□□□□□ -0.67
UBE3B-204ENST00000449510 FAM157CP0CG43 387 aa10.86□□□□□ -0.67
UBE3B-204ENST00000449510 HBG1P69891 147 aa10.86□□□□□ -0.67
UBE3B-204ENST00000449510 HBG2P69892 147 aa10.86□□□□□ -0.67
UBE3B-204ENST00000449510 FAM3AP98173 230 aa10.86□□□□□ -0.67
UBE3B-204ENST00000449510 LIAT1Q6ZQX7 453 aa10.86□□□□□ -0.67
UBE3B-204ENST00000449510 EXTL1Q92935 676 aa10.86□□□□□ -0.67
UBE3B-204ENST00000449510 PAM16Q9Y3D7 125 aa10.86□□□□□ -0.67
UBE3B-204ENST00000449510 DOCK10Q96BY6 2186 aa10.86□□□□□ -0.67
UBE3B-204ENST00000449510 A0A1B0GX78 115 aa10.86□□□□□ -0.67
UBE3B-204ENST00000449510 ZNF729A6NN14 1252 aaPredicted RBP10.86□□□□□ -0.67
UBE3B-204ENST00000449510 C9J4A7 227 aa10.86□□□□□ -0.67
UBE3B-204ENST00000449510 DHHO43323 396 aa10.86□□□□□ -0.67
UBE3B-204ENST00000449510 SNRPCP09234 159 aaKnown RBP10.86□□□□□ -0.67
UBE3B-204ENST00000449510 SPATA46Q5T0L3 261 aa10.86□□□□□ -0.67
UBE3B-204ENST00000449510 RTL6Q6ICC9 239 aa10.86□□□□□ -0.67
UBE3B-204ENST00000449510 DEGS2Q6QHC5 323 aa10.86□□□□□ -0.67
UBE3B-204ENST00000449510 TBC1D26Q86UD7 250 aa10.86□□□□□ -0.67
UBE3B-204ENST00000449510 GAPTQ8N292 157 aa10.86□□□□□ -0.67
UBE3B-204ENST00000449510 NOXO1Q8NFA2 376 aa10.86□□□□□ -0.67
UBE3B-204ENST00000449510 SLC39A7Q92504 469 aa10.86□□□□□ -0.67
UBE3B-204ENST00000449510 BTF3L4Q96K17 158 aa10.86□□□□□ -0.67
UBE3B-204ENST00000449510 CCL28Q9NRJ3 127 aa10.86□□□□□ -0.67
UBE3B-204ENST00000449510 C19orf25Q9UFG5 118 aaPredicted RBP10.86□□□□□ -0.67
UBE3B-204ENST00000449510 PRRC2CQ9Y520 2896 aaKnown RBP10.86□□□□□ -0.67
UBE3B-204ENST00000449510 TNFSF11O14788 317 aa10.86□□□□□ -0.67
UBE3B-204ENST00000449510 CTSDP07339 412 aaPredicted RBP10.86□□□□□ -0.67
UBE3B-204ENST00000449510 EGR1P18146 543 aa10.86□□□□□ -0.67
UBE3B-204ENST00000449510 TNFRSF4P43489 277 aa10.86□□□□□ -0.67
UBE3B-204ENST00000449510 GALR1P47211 349 aa10.86□□□□□ -0.67
UBE3B-204ENST00000449510 FAM3BP58499 235 aaPredicted RBP10.86□□□□□ -0.67
UBE3B-204ENST00000449510 COL19A1Q14993 1142 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms