RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 MZT1Q08AG7 82 aa11.36□□□□□ -0.59
PDLIM2-213ENST00000448520 HES5Q5TA89 166 aa11.36□□□□□ -0.59
PDLIM2-213ENST00000448520 BRD3OSQ6XYD6 125 aa11.36□□□□□ -0.59
PDLIM2-213ENST00000448520 C17orf107Q6ZR85 190 aa11.36□□□□□ -0.59
PDLIM2-213ENST00000448520 LHFPL2Q6ZUX7 228 aa11.36□□□□□ -0.59
PDLIM2-213ENST00000448520 BOLLQ8N9W6 283 aaKnown RBP11.36□□□□□ -0.59
PDLIM2-213ENST00000448520 PNLDC1Q8NA58 520 aaKnown RBP11.36□□□□□ -0.59
PDLIM2-213ENST00000448520 C19orf18Q8NEA5 215 aa11.36□□□□□ -0.59
PDLIM2-213ENST00000448520 OR4D6Q8NGJ1 314 aa11.36□□□□□ -0.59
PDLIM2-213ENST00000448520 RAB2BQ8WUD1 216 aa11.36□□□□□ -0.59
PDLIM2-213ENST00000448520 GPER1Q99527 375 aa11.36□□□□□ -0.59
PDLIM2-213ENST00000448520 FAM192AQ9GZU8 254 aa11.36□□□□□ -0.59
PDLIM2-213ENST00000448520 CNTD2Q9H8S5 307 aa11.36□□□□□ -0.59
PDLIM2-213ENST00000448520 NEK6Q9HC98 313 aa11.36□□□□□ -0.59
PDLIM2-213ENST00000448520 POMT1Q9Y6A1 747 aa11.36□□□□□ -0.59
PDLIM2-213ENST00000448520 MDFIC2A0A1B0GVS7 189 aa11.35□□□□□ -0.59
PDLIM2-213ENST00000448520 hCG_1807616A0A1W2PRN6 198 aa11.35□□□□□ -0.59
PDLIM2-213ENST00000448520 TMEM210A6NLX4 147 aa11.35□□□□□ -0.59
PDLIM2-213ENST00000448520 F8VVB4 439 aa11.35□□□□□ -0.59
PDLIM2-213ENST00000448520 F8VWA3 439 aa11.35□□□□□ -0.59
PDLIM2-213ENST00000448520 J3QT63 122 aa11.35□□□□□ -0.59
PDLIM2-213ENST00000448520 TNFRSF13BO14836 293 aaPredicted RBP11.35□□□□□ -0.59
PDLIM2-213ENST00000448520 MAGEB3O15480 346 aa11.35□□□□□ -0.59
PDLIM2-213ENST00000448520 TOX4O94842 621 aa11.35□□□□□ -0.59
PDLIM2-213ENST00000448520 NDUFA7O95182 113 aa11.35□□□□□ -0.59
PDLIM2-213ENST00000448520 RAB3BP20337 219 aa11.35□□□□□ -0.59
PDLIM2-213ENST00000448520 P2RY14Q15391 338 aa11.35□□□□□ -0.59
PDLIM2-213ENST00000448520 FAM76BQ5HYJ3 339 aa11.35□□□□□ -0.59
PDLIM2-213ENST00000448520 WDR82Q6UXN9 313 aa11.35□□□□□ -0.59
PDLIM2-213ENST00000448520 SLC25A26Q70HW3 274 aa11.35□□□□□ -0.59
PDLIM2-213ENST00000448520 KIR3DL3Q8N743 410 aa11.35□□□□□ -0.59
PDLIM2-213ENST00000448520 NKAIN3Q8N8D7 197 aa11.35□□□□□ -0.59
PDLIM2-213ENST00000448520 OR10K1Q8NGX5 313 aa11.35□□□□□ -0.59
PDLIM2-213ENST00000448520 TBC1D15Q8TC07 691 aa11.35□□□□□ -0.59
PDLIM2-213ENST00000448520 TNFAIP8L1Q8WVP5 186 aa11.35□□□□□ -0.59
PDLIM2-213ENST00000448520 AQP3Q92482 292 aa11.35□□□□□ -0.59
PDLIM2-213ENST00000448520 SLAMF9Q96A28 289 aa11.35□□□□□ -0.59
PDLIM2-213ENST00000448520 SEH1LQ96EE3 360 aa11.35□□□□□ -0.59
PDLIM2-213ENST00000448520 PCGF1Q9BSM1 259 aa11.35□□□□□ -0.59
PDLIM2-213ENST00000448520 TLNRD1Q9H1K6 362 aa11.35□□□□□ -0.59
PDLIM2-213ENST00000448520 DCSTAMPQ9H295 470 aa11.35□□□□□ -0.59
PDLIM2-213ENST00000448520 RSL24D1Q9UHA3 163 aaKnown RBP11.35□□□□□ -0.59
PDLIM2-213ENST00000448520 V9GY05 133 aa11.35□□□□□ -0.59
PDLIM2-213ENST00000448520 CLPSL1A2RUU4 121 aa11.34□□□□□ -0.59
PDLIM2-213ENST00000448520 MEGF11A6BM72 1044 aa11.34□□□□□ -0.59
PDLIM2-213ENST00000448520 A6NHS1 94 aa11.34□□□□□ -0.59
PDLIM2-213ENST00000448520 C22orf46C9J442 243 aa11.34□□□□□ -0.59
PDLIM2-213ENST00000448520 NOL3O60936 208 aaKnown RBP11.34□□□□□ -0.59
PDLIM2-213ENST00000448520 ECDO95905 644 aaPredicted RBP11.34□□□□□ -0.59
PDLIM2-213ENST00000448520 TMEM225BP0DP42 221 aa11.34□□□□□ -0.59
PDLIM2-213ENST00000448520 CFHR2P36980 270 aa11.34□□□□□ -0.59
PDLIM2-213ENST00000448520 RAG2P55895 527 aa11.34□□□□□ -0.59
PDLIM2-213ENST00000448520 PDZK1IP1Q13113 114 aa11.34□□□□□ -0.59
PDLIM2-213ENST00000448520 PDCD1Q15116 288 aa11.34□□□□□ -0.59
PDLIM2-213ENST00000448520 OLFML2AQ68BL7 652 aa11.34□□□□□ -0.59
PDLIM2-213ENST00000448520 SFRP4Q6FHJ7 346 aaPredicted RBP11.34□□□□□ -0.59
PDLIM2-213ENST00000448520 METAP1DQ6UB28 335 aaPredicted RBP11.34□□□□□ -0.59
PDLIM2-213ENST00000448520 FIP1L1Q6UN15 594 aaKnown RBP11.34□□□□□ -0.59
PDLIM2-213ENST00000448520 ZNF573Q86YE8 665 aa11.34□□□□□ -0.59
PDLIM2-213ENST00000448520 LRRC29Q8WV35 223 aa11.34□□□□□ -0.59
PDLIM2-213ENST00000448520 SSMEM1Q8WWF3 244 aa11.34□□□□□ -0.59
PDLIM2-213ENST00000448520 TAF15Q92804 592 aaKnown RBP eCLIP11.34□□□□□ -0.59
PDLIM2-213ENST00000448520 WDFY2Q96P53 400 aa11.34□□□□□ -0.59
PDLIM2-213ENST00000448520 PLGRKTQ9HBL7 147 aa11.34□□□□□ -0.59
PDLIM2-213ENST00000448520 IGHV3OR15-7A0A075B7D8 119 aa11.33□□□□□ -0.6
PDLIM2-213ENST00000448520 CENPVL3A0A0U1RRI6 287 aa11.33□□□□□ -0.6
PDLIM2-213ENST00000448520 SMIM31A0A1B0GVY4 71 aa11.33□□□□□ -0.6
PDLIM2-213ENST00000448520 A0A1W2PP11 408 aa11.33□□□□□ -0.6
PDLIM2-213ENST00000448520 PDCD5O14737 125 aa11.33□□□□□ -0.6
PDLIM2-213ENST00000448520 AKR7A2O43488 359 aa11.33□□□□□ -0.6
PDLIM2-213ENST00000448520 ADAM20O43506 726 aa11.33□□□□□ -0.6
PDLIM2-213ENST00000448520 TFF1P04155 84 aa11.33□□□□□ -0.6
PDLIM2-213ENST00000448520 MELTFP08582 738 aa11.33□□□□□ -0.6
PDLIM2-213ENST00000448520 CD37P11049 281 aa11.33□□□□□ -0.6
PDLIM2-213ENST00000448520 MMP9P14780 707 aa11.33□□□□□ -0.6
PDLIM2-213ENST00000448520 BCL3P20749 454 aa11.33□□□□□ -0.6
PDLIM2-213ENST00000448520 MPZP25189 248 aa11.33□□□□□ -0.6
PDLIM2-213ENST00000448520 NPBWR2P48146 333 aa11.33□□□□□ -0.6
PDLIM2-213ENST00000448520 PLA2G7Q13093 441 aa11.33□□□□□ -0.6
PDLIM2-213ENST00000448520 C1orf100Q5SVJ3 147 aa11.33□□□□□ -0.6
PDLIM2-213ENST00000448520 METTL11BQ5VVY1 283 aa11.33□□□□□ -0.6
PDLIM2-213ENST00000448520 GLT8D1Q68CQ7 371 aa11.33□□□□□ -0.6
PDLIM2-213ENST00000448520 TPRA1Q86W33 373 aa11.33□□□□□ -0.6
PDLIM2-213ENST00000448520 WFDC12Q8WWY7 111 aa11.33□□□□□ -0.6
PDLIM2-213ENST00000448520 DYRK2Q92630 601 aa11.33□□□□□ -0.6
PDLIM2-213ENST00000448520 BARHL1Q9BZE3 327 aa11.33□□□□□ -0.6
PDLIM2-213ENST00000448520 CHIAQ9BZP6 476 aa11.33□□□□□ -0.6
PDLIM2-213ENST00000448520 WDR13Q9H1Z4 485 aa11.33□□□□□ -0.6
PDLIM2-213ENST00000448520 MTCH1Q9NZJ7 389 aa11.33□□□□□ -0.6
PDLIM2-213ENST00000448520 C1RLQ9NZP8 487 aa11.33□□□□□ -0.6
PDLIM2-213ENST00000448520 ING4Q9UNL4 249 aa11.33□□□□□ -0.6
PDLIM2-213ENST00000448520 MRPS28Q9Y2Q9 187 aaKnown RBP11.33□□□□□ -0.6
PDLIM2-213ENST00000448520 OOEPA6NGQ2 149 aa11.32□□□□□ -0.6
PDLIM2-213ENST00000448520 IFITM5A6NNB3 132 aa11.32□□□□□ -0.6
PDLIM2-213ENST00000448520 NOTOA8MTQ0 251 aa11.32□□□□□ -0.6
PDLIM2-213ENST00000448520 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.32□□□□□ -0.6
PDLIM2-213ENST00000448520 SLC17A2O00624 439 aa11.32□□□□□ -0.6
PDLIM2-213ENST00000448520 TIMM23O14925 209 aa11.32□□□□□ -0.6
PDLIM2-213ENST00000448520 IL1AP01583 271 aa11.32□□□□□ -0.6
PDLIM2-213ENST00000448520 SFTPBP07988 381 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms