RNA–Protein interactions for RNA: ENST00000448038.2

SYNE1-213, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 6,001 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-213ENST00000448038 PURGQ9UJV8 347 aaKnown RBP6.44□□□□□ -1.38
SYNE1-213ENST00000448038 V9GYH0 126 aa6.44□□□□□ -1.38
SYNE1-213ENST00000448038 MED12Q93074 2177 aa6.44□□□□□ -1.38
SYNE1-213ENST00000448038 GBF1Q92538 1859 aa6.44□□□□□ -1.38
SYNE1-213ENST00000448038 SRCAPQ6ZRS2 3230 aa6.44□□□□□ -1.38
SYNE1-213ENST00000448038 PRSS44E7EML9 344 aa6.44□□□□□ -1.38
SYNE1-213ENST00000448038 NEURL1O76050 574 aa6.44□□□□□ -1.38
SYNE1-213ENST00000448038 FSTP19883 344 aa6.44□□□□□ -1.38
SYNE1-213ENST00000448038 COX7A1P24310 79 aa6.44□□□□□ -1.38
SYNE1-213ENST00000448038 RAB7AP51149 207 aa6.44□□□□□ -1.38
SYNE1-213ENST00000448038 IGFBP7Q16270 282 aa6.44□□□□□ -1.38
SYNE1-213ENST00000448038 Q3ZCU0 254 aa6.44□□□□□ -1.38
SYNE1-213ENST00000448038 OR14K1Q8NGZ2 314 aa6.44□□□□□ -1.38
SYNE1-213ENST00000448038 RPEQ96AT9 228 aa6.44□□□□□ -1.38
SYNE1-213ENST00000448038 ZNF488Q96MN9 340 aa6.44□□□□□ -1.38
SYNE1-213ENST00000448038 IGHV3OR15-7A0A075B7D8 119 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 RFPL4AA6NLU0 287 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 RFPL4AL1F8VTS6 287 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 ST8SIA5O15466 376 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 ERHP84090 104 aaKnown RBP6.43□□□□□ -1.38
SYNE1-213ENST00000448038 TLE4Q04727 773 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 PEA15Q15121 130 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 CST9LP1Q5W188 147 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 VWA1Q6PCB0 445 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 SLC35E1Q96K37 410 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 ZNF649Q9BS31 505 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 OR2D2Q9H210 308 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 ZNF665Q9H7R5 613 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 IGLV3-32A0A0A0MS00 114 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 TRDCB7Z8K6 153 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 LMX1BO60663 402 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 COX5BP10606 129 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 RAB13P51153 203 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 LYPD8Q6UX82 237 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 RBMS3Q6XE24 437 aaKnown RBP6.43□□□□□ -1.38
SYNE1-213ENST00000448038 OR8B3Q8NGG8 313 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 PPP1R1CQ8WVI7 109 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 PCNPQ8WW12 178 aaKnown RBP6.43□□□□□ -1.38
SYNE1-213ENST00000448038 ZDHHC16Q969W1 377 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 OR8B2Q96RD0 313 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 ZNF251Q9BRH9 671 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 CNTNAP3Q9BZ76 1288 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 KCNIP2Q9NS61 270 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 ZMIZ1Q9ULJ6 1067 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 E5RGE8 158 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 GSTZ1O43708 216 aaPredicted RBP6.43□□□□□ -1.38
SYNE1-213ENST00000448038 FCGR3BO75015 233 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 OR2F2O95006 317 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 TGM6O95932 706 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 OR2F1Q13607 317 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 ACOT7LQ6ZUV0 252 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 RNF141Q8WVD5 230 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 TMEM171Q8WVE6 324 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 NSG2Q9Y328 171 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 IGKV1D-43A0A0B4J1Z2 117 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 ANKRD34BA5PLL1 514 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 OOEPA6NGQ2 149 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 ATP6V1G2-DDX39BF2Z307 99 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 PPP1R1AQ13522 171 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 ZNF674Q2M3X9 581 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 LRRC75AQ8NAA5 344 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 WDYHV1Q96HA8 205 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 TAF9BQ9HBM6 251 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 PARD6AQ9NPB6 346 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 PCDHGA9Q9Y5G4 932 aaKnown RBP6.43□□□□□ -1.38
SYNE1-213ENST00000448038 KCNMB2Q9Y691 235 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 LTBP2Q14767 1821 aa6.43□□□□□ -1.38
SYNE1-213ENST00000448038 HBE1P02100 147 aa6.42□□□□□ -1.38
SYNE1-213ENST00000448038 ADRA2AP08913 450 aa6.42□□□□□ -1.38
SYNE1-213ENST00000448038 RPL12P30050 165 aaKnown RBP6.42□□□□□ -1.38
SYNE1-213ENST00000448038 LHX2P50458 406 aa6.42□□□□□ -1.38
SYNE1-213ENST00000448038 DHRS2Q13268 280 aa6.42□□□□□ -1.38
SYNE1-213ENST00000448038 RTP5Q14D33 572 aa6.42□□□□□ -1.38
SYNE1-213ENST00000448038 SUMF2Q8NBJ7 301 aa6.42□□□□□ -1.38
SYNE1-213ENST00000448038 OR10P1Q8NGE3 313 aa6.42□□□□□ -1.38
SYNE1-213ENST00000448038 CIB3Q96Q77 187 aaPredicted RBP6.42□□□□□ -1.38
SYNE1-213ENST00000448038 TUBG2Q9NRH3 451 aa6.42□□□□□ -1.38
SYNE1-213ENST00000448038 CISD1Q9NZ45 108 aaKnown RBP6.42□□□□□ -1.38
SYNE1-213ENST00000448038 STRAPQ9Y3F4 350 aaKnown RBP6.42□□□□□ -1.38
SYNE1-213ENST00000448038 PINLYPA6NC86 204 aa6.42□□□□□ -1.38
SYNE1-213ENST00000448038 STUMQ69YW2 141 aa6.42□□□□□ -1.38
SYNE1-213ENST00000448038 SLC7A5P1Q8MH63 180 aa6.42□□□□□ -1.38
SYNE1-213ENST00000448038 FAM57AQ8TBR7 257 aa6.42□□□□□ -1.38
SYNE1-213ENST00000448038 RPS4Y2Q8TD47 263 aa6.42□□□□□ -1.38
SYNE1-213ENST00000448038 ERGIC1Q969X5 290 aa6.42□□□□□ -1.38
SYNE1-213ENST00000448038 OR2V2Q96R30 315 aa6.42□□□□□ -1.38
SYNE1-213ENST00000448038 PRDM14Q9GZV8 571 aa6.42□□□□□ -1.38
SYNE1-213ENST00000448038 PLEKHA2Q9HB19 425 aa6.42□□□□□ -1.38
SYNE1-213ENST00000448038 G6PC2Q9NQR9 355 aa6.42□□□□□ -1.38
SYNE1-213ENST00000448038 PSENENQ9NZ42 101 aa6.42□□□□□ -1.38
SYNE1-213ENST00000448038 OR5H1A6NKK0 313 aa6.42□□□□□ -1.38
SYNE1-213ENST00000448038 OR4A8P0C604 315 aa6.42□□□□□ -1.38
SYNE1-213ENST00000448038 SULT1A3P0DMM9 295 aa6.42□□□□□ -1.38
SYNE1-213ENST00000448038 SULT1A4P0DMN0 295 aa6.42□□□□□ -1.38
SYNE1-213ENST00000448038 PRRX1P54821 245 aa6.42□□□□□ -1.38
SYNE1-213ENST00000448038 CLDN18P56856 261 aa6.42□□□□□ -1.38
SYNE1-213ENST00000448038 RBM11P57052 281 aaKnown RBP6.42□□□□□ -1.38
SYNE1-213ENST00000448038 VMA21Q3ZAQ7 101 aa6.42□□□□□ -1.38
SYNE1-213ENST00000448038 MRGPRGQ86SM5 289 aa6.42□□□□□ -1.38
SYNE1-213ENST00000448038 OR2G3Q8NGZ4 309 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms