RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 Q8TCH9 128 aa6.31□□□□□ -1.4
SF3A3P1-201ENST00000446317 C10orf105Q8TEF2 133 aa6.31□□□□□ -1.4
SF3A3P1-201ENST00000446317 CCDC107Q8WV48 283 aa6.31□□□□□ -1.4
SF3A3P1-201ENST00000446317 ST8SIA4Q92187 359 aa6.31□□□□□ -1.4
SF3A3P1-201ENST00000446317 HPS1Q92902 700 aa6.31□□□□□ -1.4
SF3A3P1-201ENST00000446317 FOXRED1Q96CU9 486 aaPredicted RBP6.31□□□□□ -1.4
SF3A3P1-201ENST00000446317 MED30Q96HR3 178 aa6.31□□□□□ -1.4
SF3A3P1-201ENST00000446317 GAFA1Q96PS6 74 aa6.31□□□□□ -1.4
SF3A3P1-201ENST00000446317 PIMREGQ9BSJ6 248 aa6.31□□□□□ -1.4
SF3A3P1-201ENST00000446317 FAAP24Q9BTP7 215 aa6.31□□□□□ -1.4
SF3A3P1-201ENST00000446317 SLIRPQ9GZT3 109 aaKnown RBP6.31□□□□□ -1.4
SF3A3P1-201ENST00000446317 CHODLQ9H9P2 273 aa6.31□□□□□ -1.4
SF3A3P1-201ENST00000446317 ZNF701Q9NV72 531 aaPredicted RBP6.31□□□□□ -1.4
SF3A3P1-201ENST00000446317 PCDHB10Q9UN67 800 aa6.31□□□□□ -1.4
SF3A3P1-201ENST00000446317 AKAP9Q99996 3911 aa6.31□□□□□ -1.4
SF3A3P1-201ENST00000446317 CHD3Q12873 2000 aaKnown RBP6.31□□□□□ -1.4
SF3A3P1-201ENST00000446317 ASH1LQ9NR48 2969 aaKnown RBP6.31□□□□□ -1.4
SF3A3P1-201ENST00000446317 DSCAMO60469 2012 aa6.3□□□□□ -1.4
SF3A3P1-201ENST00000446317 TRAV18A0A075B6X5 111 aa6.3□□□□□ -1.4
SF3A3P1-201ENST00000446317 TMEM14DPA8MWL7 114 aa6.3□□□□□ -1.4
SF3A3P1-201ENST00000446317 PSPNO60542 156 aa6.3□□□□□ -1.4
SF3A3P1-201ENST00000446317 ALX3O95076 343 aa6.3□□□□□ -1.4
SF3A3P1-201ENST00000446317 GTF2F2P13984 249 aa6.3□□□□□ -1.4
SF3A3P1-201ENST00000446317 RPS2P15880 293 aaKnown RBP6.3□□□□□ -1.4
SF3A3P1-201ENST00000446317 CDK2P24941 298 aa6.3□□□□□ -1.4
SF3A3P1-201ENST00000446317 BLVRBP30043 206 aaPredicted RBP6.3□□□□□ -1.4
SF3A3P1-201ENST00000446317 PITPNBP48739 271 aa6.3□□□□□ -1.4
SF3A3P1-201ENST00000446317 FGF12P61328 243 aa6.3□□□□□ -1.4
SF3A3P1-201ENST00000446317 RPS27AP62979 156 aaKnown RBP6.3□□□□□ -1.4
SF3A3P1-201ENST00000446317 LCN2P80188 198 aa6.3□□□□□ -1.4
SF3A3P1-201ENST00000446317 LTC4SQ16873 150 aa6.3□□□□□ -1.4
SF3A3P1-201ENST00000446317 MICBQ29980 383 aa6.3□□□□□ -1.4
SF3A3P1-201ENST00000446317 SMIM21Q3B7S5 101 aa6.3□□□□□ -1.4
SF3A3P1-201ENST00000446317 ZNF404Q494X3 552 aa6.3□□□□□ -1.4
SF3A3P1-201ENST00000446317 STUMQ69YW2 141 aa6.3□□□□□ -1.4
SF3A3P1-201ENST00000446317 SIGIRRQ6IA17 410 aa6.3□□□□□ -1.4
SF3A3P1-201ENST00000446317 Q6P435 159 aa6.3□□□□□ -1.4
SF3A3P1-201ENST00000446317 PEG10Q86TG7 708 aaKnown RBP6.3□□□□□ -1.4
SF3A3P1-201ENST00000446317 C1orf87Q8N0U7 546 aa6.3□□□□□ -1.4
SF3A3P1-201ENST00000446317 LINC00469Q8N7U9 141 aa6.3□□□□□ -1.4
SF3A3P1-201ENST00000446317 SUMF2Q8NBJ7 301 aa6.3□□□□□ -1.4
SF3A3P1-201ENST00000446317 OR4S1Q8NGB4 309 aa6.3□□□□□ -1.4
SF3A3P1-201ENST00000446317 CLDND2Q8NHS1 167 aa6.3□□□□□ -1.4
SF3A3P1-201ENST00000446317 RAB1CQ92928 201 aa6.3□□□□□ -1.4
SF3A3P1-201ENST00000446317 CPNE2Q96FN4 548 aaPredicted RBP6.3□□□□□ -1.4
SF3A3P1-201ENST00000446317 ARHGAP5-AS1Q96IT6 56 aa6.3□□□□□ -1.4
SF3A3P1-201ENST00000446317 GSX2Q9BZM3 304 aa6.3□□□□□ -1.4
SF3A3P1-201ENST00000446317 BEX4Q9NWD9 120 aaPredicted RBP6.3□□□□□ -1.4
SF3A3P1-201ENST00000446317 RHBDL2Q9NX52 303 aa6.3□□□□□ -1.4
SF3A3P1-201ENST00000446317 CCDC59Q9P031 241 aaKnown RBP6.3□□□□□ -1.4
SF3A3P1-201ENST00000446317 EXTL2Q9UBQ6 330 aa6.3□□□□□ -1.4
SF3A3P1-201ENST00000446317 PEX16Q9Y5Y5 336 aa6.3□□□□□ -1.4
SF3A3P1-201ENST00000446317 DYSFO75923 2080 aa6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 TRAV38-1A0A0B4J264 116 aa6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 TRAV24A0A0B4J272 114 aa6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 LINC00854A0A1B0GVQ3 168 aa6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 FAM172BPA6NC97 362 aa6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 NKX6-3A6NJ46 265 aa6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 SLC33A1O00400 549 aaPredicted RBP6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 DVL1O14640 695 aa6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 LDLRAD4O15165 306 aa6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 B3GALNT1O75752 331 aa6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 M6PRP20645 277 aa6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 NR4A2P43354 598 aa6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 EDDM3BP56851 147 aa6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 AESQ08117 197 aa6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 GRK1Q15835 563 aa6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 PAN3Q58A45 887 aaKnown RBP6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 PLAC9Q5JTB6 97 aa6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 RAB12Q6IQ22 244 aa6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 FAM53AQ6NSI3 398 aaPredicted RBP6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 CNIH2Q6PI25 160 aa6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 ASCL4Q6XD76 172 aa6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 SAXO1Q8IYX7 474 aa6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 PRR18Q8N4B5 295 aa6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 ZSCAN4Q8NAM6 433 aaPredicted RBP6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 PXT1Q8NFP0 134 aa6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 OR10Z1Q8NGY1 313 aa6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 OR4K15Q8NH41 348 aa6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 ANGPTL6Q8NI99 470 aa6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 KCNG3Q8TAE7 436 aa6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 PLPPR1Q8TBJ4 325 aa6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 NUDCD2Q8WVJ2 157 aa6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 TIMD4Q96H15 378 aa6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 Q96M66 194 aa6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 SULT4A1Q9BR01 284 aa6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 CST11Q9H112 138 aa6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 BARX1Q9HBU1 254 aaPredicted RBP6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 HES4Q9HCC6 221 aa6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 CHMP1AQ9HD42 196 aaPredicted RBP6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 DLL4Q9NR61 685 aa6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 ZNF230Q9UIE0 474 aaPredicted RBP6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 RAB22AQ9UL26 194 aa6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 MAB21L2Q9Y586 359 aa6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 ARFGEF3Q5TH69 2177 aa6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 ABCA12Q86UK0 2595 aa6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 PLCE1Q9P212 2302 aa6.29□□□□□ -1.4
SF3A3P1-201ENST00000446317 A0A0G2JMP0 313 aa6.28□□□□□ -1.4
SF3A3P1-201ENST00000446317 A0A0X1KG70 313 aa6.28□□□□□ -1.4
SF3A3P1-201ENST00000446317 TMEM235A6NFC5 223 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms