RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 UBQLN4Q9NRR5 601 aa2.36□□□□□ -2.03
UBBP3-201ENST00000445497 C19orf25Q9UFG5 118 aaPredicted RBP2.36□□□□□ -2.03
UBBP3-201ENST00000445497 MMP17Q9ULZ9 603 aa2.36□□□□□ -2.03
UBBP3-201ENST00000445497 PAM16Q9Y3D7 125 aa2.36□□□□□ -2.03
UBBP3-201ENST00000445497 HDGFL3Q9Y3E1 203 aa2.36□□□□□ -2.03
UBBP3-201ENST00000445497 UBIAD1Q9Y5Z9 338 aa2.36□□□□□ -2.03
UBBP3-201ENST00000445497 HS3ST3B1Q9Y662 390 aa2.36□□□□□ -2.03
UBBP3-201ENST00000445497 SCAF11Q99590 1463 aaKnown RBP2.36□□□□□ -2.03
UBBP3-201ENST00000445497 CNTNAP1P78357 1384 aa2.36□□□□□ -2.03
UBBP3-201ENST00000445497 SMARCA4P51532 1647 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 DAPK1P53355 1430 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 POLA1P09884 1462 aaPredicted RBP2.35□□□□□ -2.03
UBBP3-201ENST00000445497 ABCC10Q5T3U5 1492 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 TRBV5-7A0A0A0MS05 114 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 A0A0A6YYD4 124 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 A0A1W2PP11 408 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 UBE2QL1A1L167 161 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 ZNF726A6NNF4 738 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 FABP5P3A8MUU1 101 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 ZNF814B7Z6K7 855 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 EEF1E1-BLOC1S5C9J1V9 151 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 DIRC3C9JPN6 131 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 SMKR1H3BMG3 65 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 RNASET2O00584 256 aaKnown RBP2.35□□□□□ -2.03
UBBP3-201ENST00000445497 CDX4O14627 284 aaPredicted RBP2.35□□□□□ -2.03
UBBP3-201ENST00000445497 EEF1E1O43324 174 aaKnown RBP2.35□□□□□ -2.03
UBBP3-201ENST00000445497 GFRA3O60609 400 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 MRPS14O60783 128 aaKnown RBP2.35□□□□□ -2.03
UBBP3-201ENST00000445497 C1QL1O75973 258 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 LYPD3O95274 346 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 PLAUP00749 431 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 IGHG2P01859 326 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 SERPINE1P05121 402 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 CD2P06729 351 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 CD48P09326 243 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 FAM157CP0CG43 387 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 ZNF250P15622 560 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 SELEP16581 610 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 RPL35AP18077 110 aaKnown RBP2.35□□□□□ -2.03
UBBP3-201ENST00000445497 RCC1P18754 421 aaPredicted RBP2.35□□□□□ -2.03
UBBP3-201ENST00000445497 HOXA5P20719 270 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 BCL3P20749 454 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 CTGFP29279 349 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 AGTR1P30556 359 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 BRS3P32247 399 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 RPL3P39023 403 aaKnown RBP2.35□□□□□ -2.03
UBBP3-201ENST00000445497 GUCA1AP43080 201 aaPredicted RBP2.35□□□□□ -2.03
UBBP3-201ENST00000445497 OR1D4P47884 311 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 FABP6P51161 128 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 SEC61BP60468 96 aaKnown RBP2.35□□□□□ -2.03
UBBP3-201ENST00000445497 SEC61A1P61619 476 aaKnown RBP2.35□□□□□ -2.03
UBBP3-201ENST00000445497 RPS25P62851 125 aaKnown RBP2.35□□□□□ -2.03
UBBP3-201ENST00000445497 DCDP81605 110 aaKnown RBP2.35□□□□□ -2.03
UBBP3-201ENST00000445497 SLC25A11Q02978 314 aaKnown RBP2.35□□□□□ -2.03
UBBP3-201ENST00000445497 FABP9Q0Z7S8 132 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 CRHR2Q13324 411 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 PMAIP1Q13794 54 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 GPR18Q14330 331 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 CDSNQ15517 529 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 CTF1Q16619 201 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 SRSF7Q16629 238 aaKnown RBP eCLIP2.35□□□□□ -2.03
UBBP3-201ENST00000445497 TCEAL5Q5H9L2 206 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 SPANXN3Q5MJ09 141 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 DCAF12Q5T6F0 453 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 OTUD1Q5VV17 481 aaPredicted RBP2.35□□□□□ -2.03
UBBP3-201ENST00000445497 RPL22L1Q6P5R6 122 aaKnown RBP2.35□□□□□ -2.03
UBBP3-201ENST00000445497 PRSS54Q6PEW0 395 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 APOOLQ6UXV4 268 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 C12orf54Q6X4T0 127 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 IL34Q6ZMJ4 242 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 ZNF730Q6ZMV8 503 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 Q6ZSR6 202 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 C8orf86Q6ZUL3 223 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 Q75L30 129 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 LRP11Q86VZ4 500 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 TMEM229BQ8NBD8 167 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 NUP35Q8NFH5 326 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 OR2T12Q8NG77 320 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 OR4F17Q8NGA8 305 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 OR2A1Q8NGT9 310 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 OR8S1Q8NH09 359 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 OR4F5Q8NH21 305 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 OR5W2Q8NH69 310 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 FGFBP3Q8TAT2 258 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 GPR148Q8TDV2 347 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 C15orf40Q8WUR7 153 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.35□□□□□ -2.03
UBBP3-201ENST00000445497 RASL10AQ92737 203 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 TMEM106AQ96A25 262 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 PTX4Q96A99 478 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 GPR146Q96CH1 333 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 KAZALD1Q96I82 304 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 SLC35E1Q96K37 410 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 PGLYRP3Q96LB9 341 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 NEDD4LQ96PU5 975 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 OR2M4Q96R27 311 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 OR4F4Q96R69 305 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 FCRL5Q96RD9 977 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 GPHA2Q96T91 129 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 S100A13Q99584 98 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms