RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 HAUS1Q96CS2 278 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 DCUN1D1Q96GG9 259 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 C1orf147Q96MC9 270 aaPredicted RBP3.5□□□□□ -1.85
VPS50-206ENST00000443443 MROQ9BYG7 248 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 ALX4Q9H161 411 aaPredicted RBP3.5□□□□□ -1.85
VPS50-206ENST00000443443 DCSTAMPQ9H295 470 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 TPK1Q9H3S4 243 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 TMEM138Q9NPI0 162 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 SPANXA1Q9NS26 97 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 DMAC2Q9NW81 257 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 GSKIPQ9P0R6 139 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 DKKL1Q9UK85 242 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 OR52A1Q9UKL2 312 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 ZNF257Q9Y2Q1 563 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 UFC1Q9Y3C8 167 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 ORC6Q9Y5N6 252 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 NCOA1Q15788 1441 aa3.5□□□□□ -1.85
VPS50-206ENST00000443443 IGHV3OR16-13A0A075B7E8 117 aa3.49□□□□□ -1.85
VPS50-206ENST00000443443 A0A087WUJ7 227 aa3.49□□□□□ -1.85
VPS50-206ENST00000443443 IGKV1D-13A0A0B4J2D9 117 aa3.49□□□□□ -1.85
VPS50-206ENST00000443443 IGHV3-38A0A0C4DH36 116 aa3.49□□□□□ -1.85
VPS50-206ENST00000443443 A0A0G2JRQ6 117 aa3.49□□□□□ -1.85
VPS50-206ENST00000443443 EVPLLA8MZ36 301 aa3.49□□□□□ -1.85
VPS50-206ENST00000443443 GPR31O00270 319 aa3.49□□□□□ -1.85
VPS50-206ENST00000443443 SLC17A2O00624 439 aa3.49□□□□□ -1.85
VPS50-206ENST00000443443 MYL12BO14950 172 aa3.49□□□□□ -1.85
VPS50-206ENST00000443443 SERPINA7P05543 415 aa3.49□□□□□ -1.85
VPS50-206ENST00000443443 IL3P08700 152 aa3.49□□□□□ -1.85
VPS50-206ENST00000443443 IGKV1-13P0DP09 117 aa3.49□□□□□ -1.85
VPS50-206ENST00000443443 ERGP11308 486 aa3.49□□□□□ -1.85
VPS50-206ENST00000443443 PAX6P26367 422 aa3.49□□□□□ -1.85
VPS50-206ENST00000443443 GGT2P36268 569 aa3.49□□□□□ -1.85
VPS50-206ENST00000443443 VDAC2P45880 294 aaPredicted RBP3.49□□□□□ -1.85
VPS50-206ENST00000443443 PFN3P60673 137 aa3.49□□□□□ -1.85
VPS50-206ENST00000443443 RAB5BP61020 215 aa3.49□□□□□ -1.85
VPS50-206ENST00000443443 APOFQ13790 326 aa3.49□□□□□ -1.85
VPS50-206ENST00000443443 CDK10Q15131 360 aa3.49□□□□□ -1.85
VPS50-206ENST00000443443 SNRNP35Q16560 246 aaKnown RBP3.49□□□□□ -1.85
VPS50-206ENST00000443443 PRSS8Q16651 343 aa3.49□□□□□ -1.85
VPS50-206ENST00000443443 UFSP1Q6NVU6 142 aa3.49□□□□□ -1.85
VPS50-206ENST00000443443 SMIM20Q8N5G0 67 aa3.49□□□□□ -1.85
VPS50-206ENST00000443443 ZNF676Q8N7Q3 588 aa3.49□□□□□ -1.85
VPS50-206ENST00000443443 UBAC2Q8NBM4 344 aa3.49□□□□□ -1.85
VPS50-206ENST00000443443 C11orf40Q8WZ69 217 aa3.49□□□□□ -1.85
VPS50-206ENST00000443443 LRRC58Q96CX6 371 aa3.49□□□□□ -1.85
VPS50-206ENST00000443443 BIRC8Q96P09 236 aa3.49□□□□□ -1.85
VPS50-206ENST00000443443 METTL26Q96S19 204 aa3.49□□□□□ -1.85
VPS50-206ENST00000443443 RNF126Q9BV68 326 aa3.49□□□□□ -1.85
VPS50-206ENST00000443443 EMC6Q9BV81 110 aa3.49□□□□□ -1.85
VPS50-206ENST00000443443 SUCNR1Q9BXA5 334 aa3.49□□□□□ -1.85
VPS50-206ENST00000443443 YTHDF1Q9BYJ9 559 aaKnown RBP3.49□□□□□ -1.85
VPS50-206ENST00000443443 SLC25A39Q9BZJ4 359 aaPredicted RBP3.49□□□□□ -1.85
VPS50-206ENST00000443443 C20orf85Q9H1P6 137 aa3.49□□□□□ -1.85
VPS50-206ENST00000443443 SH2D2AQ9NP31 389 aa3.49□□□□□ -1.85
VPS50-206ENST00000443443 TRMT112Q9UI30 125 aaKnown RBP3.49□□□□□ -1.85
VPS50-206ENST00000443443 VAX2Q9UIW0 290 aa3.49□□□□□ -1.85
VPS50-206ENST00000443443 CELA1Q9UNI1 258 aa3.49□□□□□ -1.85
VPS50-206ENST00000443443 SYNMO15061 1565 aa3.49□□□□□ -1.85
VPS50-206ENST00000443443 WDR7Q9Y4E6 1490 aa3.48□□□□□ -1.85
VPS50-206ENST00000443443 A0A087WWV3 80 aa3.48□□□□□ -1.85
VPS50-206ENST00000443443 TRAV8-2A0A0B4J237 113 aa3.48□□□□□ -1.85
VPS50-206ENST00000443443 RBFOX3A6NFN3 312 aa3.48□□□□□ -1.85
VPS50-206ENST00000443443 FOXI3A8MTJ6 420 aaPredicted RBP3.48□□□□□ -1.85
VPS50-206ENST00000443443 K7EQG2 157 aa3.48□□□□□ -1.85
VPS50-206ENST00000443443 MANBAO00462 879 aa3.48□□□□□ -1.85
VPS50-206ENST00000443443 CST8O60676 142 aa3.48□□□□□ -1.85
VPS50-206ENST00000443443 CCNKO75909 580 aa3.48□□□□□ -1.85
VPS50-206ENST00000443443 MT-CO2P00403 227 aa3.48□□□□□ -1.85
VPS50-206ENST00000443443 APOC1P02654 83 aa3.48□□□□□ -1.85
VPS50-206ENST00000443443 IGKV5-2P06315 115 aa3.48□□□□□ -1.85
VPS50-206ENST00000443443 OR10J4P0C629 311 aa3.48□□□□□ -1.85
VPS50-206ENST00000443443 C1GALT1C1LP0DN25 315 aa3.48□□□□□ -1.85
VPS50-206ENST00000443443 SLC6A1P30531 599 aa3.48□□□□□ -1.85
VPS50-206ENST00000443443 FMO3P31513 532 aa3.48□□□□□ -1.85
VPS50-206ENST00000443443 OR3A4PP47883 348 aa3.48□□□□□ -1.85
VPS50-206ENST00000443443 PSMB2P49721 201 aa3.48□□□□□ -1.85
VPS50-206ENST00000443443 NDUFV3P56181 108 aaKnown RBP3.48□□□□□ -1.85
VPS50-206ENST00000443443 LAMTOR4Q0VGL1 99 aa3.48□□□□□ -1.85
VPS50-206ENST00000443443 SHHQ15465 462 aa3.48□□□□□ -1.85
VPS50-206ENST00000443443 CEACAM16Q2WEN9 425 aa3.48□□□□□ -1.85
VPS50-206ENST00000443443 FAM182AQ5T1J6 154 aa3.48□□□□□ -1.85
VPS50-206ENST00000443443 LCE3AQ5TA76 89 aa3.48□□□□□ -1.85
VPS50-206ENST00000443443 FAM78BQ5VT40 261 aa3.48□□□□□ -1.85
VPS50-206ENST00000443443 TMEM215Q68D42 235 aa3.48□□□□□ -1.85
VPS50-206ENST00000443443 ZNF620Q6ZNG0 422 aa3.48□□□□□ -1.85
VPS50-206ENST00000443443 NAA40Q86UY6 237 aa3.48□□□□□ -1.85
VPS50-206ENST00000443443 C6orf223Q8N319 242 aa3.48□□□□□ -1.85
VPS50-206ENST00000443443 NATD1Q8N6N6 113 aa3.48□□□□□ -1.85
VPS50-206ENST00000443443 NPWQ8N729 165 aa3.48□□□□□ -1.85
VPS50-206ENST00000443443 OR1P1Q8NH06 330 aa3.48□□□□□ -1.85
VPS50-206ENST00000443443 OR9G1Q8NH87 305 aa3.48□□□□□ -1.85
VPS50-206ENST00000443443 OR1S1Q8NH92 325 aa3.48□□□□□ -1.85
VPS50-206ENST00000443443 FLVCR1-AS1Q8TAF5 88 aa3.48□□□□□ -1.85
VPS50-206ENST00000443443 SSC4DQ8WTU2 575 aa3.48□□□□□ -1.85
VPS50-206ENST00000443443 IL22RA2Q969J5 263 aa3.48□□□□□ -1.85
VPS50-206ENST00000443443 FAM3DQ96BQ1 224 aa3.48□□□□□ -1.85
VPS50-206ENST00000443443 TAMM41Q96BW9 452 aa3.48□□□□□ -1.85
VPS50-206ENST00000443443 PFDN5Q99471 154 aa3.48□□□□□ -1.85
VPS50-206ENST00000443443 SLIRPQ9GZT3 109 aaKnown RBP3.48□□□□□ -1.85
VPS50-206ENST00000443443 TMEM100Q9NV29 134 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms