RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 EGLN3Q9H6Z9 239 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 PLEKHA1Q9HB21 404 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 ANKRD10Q9NXR5 420 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 THYN1Q9P016 225 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 SERGEFQ9UGK8 458 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 PSG11Q9UQ72 335 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 NTNG1Q9Y2I2 539 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 STRAPQ9Y3F4 350 aaKnown RBP2.46□□□□□ -2.02
LIG4-203ENST00000442234 CCDC88CQ9P219 2028 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 ANK2Q01484 3957 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 TRBV7-9A0A0J9YWB2 115 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 LOC100289279A0A1B0GTE1 492 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 RBFOX3A6NFN3 312 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 C9orf172C9J069 976 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 KLRC4-KLRK1H3BQV0 150 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 HCRTR1O43613 425 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 PLPP2O43688 288 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 DDAH2O95865 285 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 EFEMP2O95967 443 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 IFNA5P01569 189 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 APOA2P02652 100 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 RHOCP08134 193 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 POU2F2P09086 479 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 SCGB1A1P11684 91 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 ACP5P13686 325 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 ZNF28P17035 718 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 TACR1P25103 407 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 ELAVL4P26378 380 aaKnown RBP2.45□□□□□ -2.02
LIG4-203ENST00000442234 RPL12P30050 165 aaKnown RBP2.45□□□□□ -2.02
LIG4-203ENST00000442234 CD70P32970 193 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 GABRA3P34903 492 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 XCR1P46094 333 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 CX3CR1P49238 355 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 PGFP49763 221 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 PPP2CBP62714 309 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 PPP2CAP67775 309 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 PAFAH1B2P68402 229 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 PIN1Q13526 163 aaPredicted RBP2.45□□□□□ -2.02
LIG4-203ENST00000442234 CEACAM21Q3KPI0 293 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 CCSMST1Q4G0I0 132 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 LY6G6FQ5SQ64 297 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 C20orf204Q6ZNR8 217 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 ZNF788Q6ZQV5 615 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 Q6ZSR6 202 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 FAM219AQ8IW50 185 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 CYB561D1Q8N8Q1 229 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 C17orf47Q8NEP4 570 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 OR2Z1Q8NG97 314 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 GPR32P1Q8NGA4 272 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 TSEN15Q8WW01 171 aaKnown RBP2.45□□□□□ -2.02
LIG4-203ENST00000442234 PSMG2Q969U7 264 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 ZNF587Q96SQ5 575 aaPredicted RBP2.45□□□□□ -2.02
LIG4-203ENST00000442234 PARLQ9H300 379 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 PLK3Q9H4B4 646 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 SRD5A3Q9H8P0 318 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 UBTD1Q9HAC8 227 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 PLEKHJ1Q9NW61 149 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 FBXL17Q9UF56 701 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 CGGBP1Q9UFW8 167 aaPredicted RBP2.45□□□□□ -2.02
LIG4-203ENST00000442234 OR51B2Q9Y5P1 312 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 LIPGQ9Y5X9 500 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 SCN10AQ9Y5Y9 1956 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 KCNE1BA0A087WTH5 132 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 A0A087WWC5 75 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 TRBV5-3A0A0A0MS03 114 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 IGHV1OR15-9A0A0B4J2B8 117 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 PGPEP1LA6NFU8 196 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 IGLON5A6NGN9 336 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 PRR19A6NJB7 356 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 ZFP92A6NM28 416 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 B4DEV8 164 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 F8VVB4 439 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 F8VWA3 439 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 G3V3Y1 287 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 GABRDO14764 452 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 ZNF217O75362 1048 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 C1QL1O75973 258 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 WISP1O95388 367 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 CLDN1O95832 211 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 TOMM40O96008 361 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 MAS1P04201 325 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 PLA2G2AP14555 144 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 CSNK2A2P19784 350 aaPredicted RBP2.45□□□□□ -2.02
LIG4-203ENST00000442234 ID1P41134 155 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 GALR1P47211 349 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 FAM3BP58499 235 aaPredicted RBP2.45□□□□□ -2.02
LIG4-203ENST00000442234 SNRPD1P62314 119 aaKnown RBP2.45□□□□□ -2.02
LIG4-203ENST00000442234 FAM3AP98173 230 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 PLAURQ03405 335 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 DUSP2Q05923 314 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 PPP1R1AQ13522 171 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 RUNX2Q13950 521 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 PAFAH1B3Q15102 231 aaKnown RBP2.45□□□□□ -2.02
LIG4-203ENST00000442234 GABRA6Q16445 453 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 C2orf76Q3KRA6 126 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 ALG10BQ5I7T1 473 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 CTSL3PQ5NE16 218 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 PLEKHS1Q5SXH7 462 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 FHL5Q5TD97 284 aa2.45□□□□□ -2.02
LIG4-203ENST00000442234 PRSS54Q6PEW0 395 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms