RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 MT-ND2P03891 347 aa16.12■□□□□ 0.17
SHROOM1-204ENST00000440118 DLX6P56179 175 aa16.12■□□□□ 0.17
SHROOM1-204ENST00000440118 PROK1P58294 105 aa16.12■□□□□ 0.17
SHROOM1-204ENST00000440118 ZNF146Q15072 292 aa16.12■□□□□ 0.17
SHROOM1-204ENST00000440118 LRRC36Q1X8D7 754 aa16.12■□□□□ 0.17
SHROOM1-204ENST00000440118 LHFPL4Q7Z7J7 247 aa16.12■□□□□ 0.17
SHROOM1-204ENST00000440118 OR4S1Q8NGB4 309 aa16.12■□□□□ 0.17
SHROOM1-204ENST00000440118 OR52N4Q8NGI2 321 aa16.12■□□□□ 0.17
SHROOM1-204ENST00000440118 APH1BQ8WW43 257 aa16.12■□□□□ 0.17
SHROOM1-204ENST00000440118 GPER1Q99527 375 aa16.12■□□□□ 0.17
SHROOM1-204ENST00000440118 NKX3-1Q99801 234 aaPredicted RBP16.12■□□□□ 0.17
SHROOM1-204ENST00000440118 MEGF9Q9H1U4 602 aa16.12■□□□□ 0.17
SHROOM1-204ENST00000440118 TET2Q6N021 2002 aaPredicted RBP16.12■□□□□ 0.17
SHROOM1-204ENST00000440118 TRGV10A0A0A0MS01 117 aa16.11■□□□□ 0.17
SHROOM1-204ENST00000440118 E9PI62 339 aa16.11■□□□□ 0.17
SHROOM1-204ENST00000440118 PSPNO60542 156 aa16.11■□□□□ 0.17
SHROOM1-204ENST00000440118 KDM4BO94953 1096 aa16.11■□□□□ 0.17
SHROOM1-204ENST00000440118 OR2H2O95918 312 aa16.11■□□□□ 0.17
SHROOM1-204ENST00000440118 CD2P06729 351 aa16.11■□□□□ 0.17
SHROOM1-204ENST00000440118 MYL12AP19105 171 aa16.11■□□□□ 0.17
SHROOM1-204ENST00000440118 OR3A1P47881 315 aa16.11■□□□□ 0.17
SHROOM1-204ENST00000440118 P2RX3P56373 397 aa16.11■□□□□ 0.17
SHROOM1-204ENST00000440118 SLC35E4Q6ICL7 350 aa16.11■□□□□ 0.17
SHROOM1-204ENST00000440118 TMPRSS11AQ6ZMR5 421 aa16.11■□□□□ 0.17
SHROOM1-204ENST00000440118 LIAT1Q6ZQX7 453 aa16.11■□□□□ 0.17
SHROOM1-204ENST00000440118 OR2T6Q8NHC8 308 aa16.11■□□□□ 0.17
SHROOM1-204ENST00000440118 NDNFQ8TB73 568 aa16.11■□□□□ 0.17
SHROOM1-204ENST00000440118 NPFFR1Q9GZQ6 430 aa16.11■□□□□ 0.17
SHROOM1-204ENST00000440118 FAM192AQ9GZU8 254 aa16.11■□□□□ 0.17
SHROOM1-204ENST00000440118 GAL3ST2Q9H3Q3 398 aa16.11■□□□□ 0.17
SHROOM1-204ENST00000440118 SESN1Q9Y6P5 492 aa16.11■□□□□ 0.17
SHROOM1-204ENST00000440118 IGKV1-12A0A0C4DH73 117 aa16.1■□□□□ 0.17
SHROOM1-204ENST00000440118 IGKV1D-12P01611 117 aa16.1■□□□□ 0.17
SHROOM1-204ENST00000440118 RAB3AP20336 220 aa16.1■□□□□ 0.17
SHROOM1-204ENST00000440118 SOX2P48431 317 aa16.1■□□□□ 0.17
SHROOM1-204ENST00000440118 MED21Q13503 144 aa16.1■□□□□ 0.17
SHROOM1-204ENST00000440118 KISS1Q15726 138 aa16.1■□□□□ 0.17
SHROOM1-204ENST00000440118 SSX2Q16385 188 aa16.1■□□□□ 0.17
SHROOM1-204ENST00000440118 SMN1Q16637 294 aaKnown RBP16.1■□□□□ 0.17
SHROOM1-204ENST00000440118 ZNF626Q68DY1 528 aa16.1■□□□□ 0.17
SHROOM1-204ENST00000440118 TCF23Q7RTU1 214 aa16.1■□□□□ 0.17
SHROOM1-204ENST00000440118 SATL1Q86VE3 508 aa16.1■□□□□ 0.17
SHROOM1-204ENST00000440118 SAXO1Q8IYX7 474 aa16.1■□□□□ 0.17
SHROOM1-204ENST00000440118 SETD9Q8NE22 299 aa16.1■□□□□ 0.17
SHROOM1-204ENST00000440118 RPS4Y2Q8TD47 263 aa16.1■□□□□ 0.17
SHROOM1-204ENST00000440118 SEBOXQ9HB31 216 aaPredicted RBP16.1■□□□□ 0.17
SHROOM1-204ENST00000440118 RHOFQ9HBH0 211 aa16.1■□□□□ 0.17
SHROOM1-204ENST00000440118 ING3Q9NXR8 418 aa16.1■□□□□ 0.17
SHROOM1-204ENST00000440118 UBE2J1Q9Y385 318 aaPredicted RBP16.1■□□□□ 0.17
SHROOM1-204ENST00000440118 ODF3BA8MYP8 253 aa16.09■□□□□ 0.17
SHROOM1-204ENST00000440118 F2RL2O00254 374 aa16.09■□□□□ 0.17
SHROOM1-204ENST00000440118 GTF2A1P52655 376 aaPredicted RBP16.09■□□□□ 0.17
SHROOM1-204ENST00000440118 ZNF691Q5VV52 312 aa16.09■□□□□ 0.17
SHROOM1-204ENST00000440118 PARP16Q8N5Y8 322 aa16.09■□□□□ 0.17
SHROOM1-204ENST00000440118 DTX3Q8N9I9 347 aa16.09■□□□□ 0.17
SHROOM1-204ENST00000440118 CNIH3Q8TBE1 160 aa16.09■□□□□ 0.17
SHROOM1-204ENST00000440118 MALSU1Q96EH3 234 aa16.09■□□□□ 0.17
SHROOM1-204ENST00000440118 AJUBAQ96IF1 538 aa16.09■□□□□ 0.17
SHROOM1-204ENST00000440118 CLEC7AQ9BXN2 247 aa16.09■□□□□ 0.17
SHROOM1-204ENST00000440118 RANBP3Q9H6Z4 567 aaPredicted RBP16.09■□□□□ 0.17
SHROOM1-204ENST00000440118 C8orf4Q9NR00 106 aa16.09■□□□□ 0.17
SHROOM1-204ENST00000440118 MRPS18AQ9NVS2 196 aaKnown RBP16.09■□□□□ 0.17
SHROOM1-204ENST00000440118 CHCHD3Q9NX63 227 aaKnown RBP16.09■□□□□ 0.17
SHROOM1-204ENST00000440118 MEGF8Q7Z7M0 2845 aa16.08■□□□□ 0.16
SHROOM1-204ENST00000440118 IGHV2-26A0A0B4J1V2 119 aa16.08■□□□□ 0.16
SHROOM1-204ENST00000440118 WBP4O75554 376 aaKnown RBP16.08■□□□□ 0.16
SHROOM1-204ENST00000440118 CLIC3O95833 236 aa16.08■□□□□ 0.16
SHROOM1-204ENST00000440118 LIMS3P0CW19 117 aa16.08■□□□□ 0.16
SHROOM1-204ENST00000440118 LIMS4P0CW20 117 aa16.08■□□□□ 0.16
SHROOM1-204ENST00000440118 DCKP27707 260 aa16.08■□□□□ 0.16
SHROOM1-204ENST00000440118 ERP29P30040 261 aaKnown RBP16.08■□□□□ 0.16
SHROOM1-204ENST00000440118 KRTAP10-3P60369 221 aa16.08■□□□□ 0.16
SHROOM1-204ENST00000440118 PPP3R1P63098 170 aa16.08■□□□□ 0.16
SHROOM1-204ENST00000440118 SLC34A1Q06495 639 aa16.08■□□□□ 0.16
SHROOM1-204ENST00000440118 IL18R1Q13478 541 aa16.08■□□□□ 0.16
SHROOM1-204ENST00000440118 ATXN7L3Q14CW9 347 aaPredicted RBP16.08■□□□□ 0.16
SHROOM1-204ENST00000440118 RCN1Q15293 331 aa16.08■□□□□ 0.16
SHROOM1-204ENST00000440118 ARSJQ5FYB0 599 aaPredicted RBP16.08■□□□□ 0.16
SHROOM1-204ENST00000440118 TTC23Q5W5X9 447 aa16.08■□□□□ 0.16
SHROOM1-204ENST00000440118 ASPHD2Q6ICH7 369 aa16.08■□□□□ 0.16
SHROOM1-204ENST00000440118 RPL22L1Q6P5R6 122 aaKnown RBP16.08■□□□□ 0.16
SHROOM1-204ENST00000440118 Q6ZTK2 550 aa16.08■□□□□ 0.16
SHROOM1-204ENST00000440118 CHST4Q8NCG5 386 aa16.08■□□□□ 0.16
SHROOM1-204ENST00000440118 OR11H6Q8NGC7 330 aa16.08■□□□□ 0.16
SHROOM1-204ENST00000440118 GPR148Q8TDV2 347 aa16.08■□□□□ 0.16
SHROOM1-204ENST00000440118 NR1H4Q96RI1 486 aaPredicted RBP16.08■□□□□ 0.16
SHROOM1-204ENST00000440118 JAM3Q9BX67 310 aa16.08■□□□□ 0.16
SHROOM1-204ENST00000440118 TMEM133Q9H2Q1 129 aa16.08■□□□□ 0.16
SHROOM1-204ENST00000440118 MMP27Q9H306 513 aa16.08■□□□□ 0.16
SHROOM1-204ENST00000440118 DCLRE1BQ9H816 532 aa16.08■□□□□ 0.16
SHROOM1-204ENST00000440118 FGF20Q9NP95 211 aaPredicted RBP16.08■□□□□ 0.16
SHROOM1-204ENST00000440118 FBLN5Q9UBX5 448 aa16.08■□□□□ 0.16
SHROOM1-204ENST00000440118 PITPNC1Q9UKF7 332 aa16.08■□□□□ 0.16
SHROOM1-204ENST00000440118 HILPDAQ9Y5L2 63 aa16.08■□□□□ 0.16
SHROOM1-204ENST00000440118 HSPB6O14558 160 aa16.07■□□□□ 0.16
SHROOM1-204ENST00000440118 DEGS1O15121 323 aa16.07■□□□□ 0.16
SHROOM1-204ENST00000440118 ALX3O95076 343 aa16.07■□□□□ 0.16
SHROOM1-204ENST00000440118 ATP6V1G2O95670 118 aa16.07■□□□□ 0.16
SHROOM1-204ENST00000440118 MTNR1BP49286 362 aa16.07■□□□□ 0.16
SHROOM1-204ENST00000440118 AESQ08117 197 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms