RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 RFT1Q96AA3 541 aa13.14□□□□□ -0.31
SNRPD3-204ENST00000439775 Q96MT0 163 aa13.14□□□□□ -0.31
SNRPD3-204ENST00000439775 COMMD4Q9H0A8 199 aa13.14□□□□□ -0.31
SNRPD3-204ENST00000439775 NEK6Q9HC98 313 aa13.14□□□□□ -0.31
SNRPD3-204ENST00000439775 EXOSC4Q9NPD3 245 aaKnown RBP13.14□□□□□ -0.31
SNRPD3-204ENST00000439775 ABCB10Q9NRK6 738 aa13.14□□□□□ -0.31
SNRPD3-204ENST00000439775 AASSQ9UDR5 926 aa13.14□□□□□ -0.31
SNRPD3-204ENST00000439775 UBE2J1Q9Y385 318 aaPredicted RBP13.14□□□□□ -0.31
SNRPD3-204ENST00000439775 DSCAML1Q8TD84 2053 aa13.14□□□□□ -0.31
SNRPD3-204ENST00000439775 A6NDX4 124 aa13.13□□□□□ -0.31
SNRPD3-204ENST00000439775 TMEM212A6NML5 194 aa13.13□□□□□ -0.31
SNRPD3-204ENST00000439775 SH2D1BO14796 132 aa13.13□□□□□ -0.31
SNRPD3-204ENST00000439775 OR2H2O95918 312 aa13.13□□□□□ -0.31
SNRPD3-204ENST00000439775 LMO1P25800 156 aa13.13□□□□□ -0.31
SNRPD3-204ENST00000439775 RAB40BQ12829 278 aa13.13□□□□□ -0.31
SNRPD3-204ENST00000439775 DYNC1I2Q13409 638 aaKnown RBP13.13□□□□□ -0.31
SNRPD3-204ENST00000439775 PLA1AQ53H76 456 aa13.13□□□□□ -0.31
SNRPD3-204ENST00000439775 CCBE1Q6UXH8 406 aaPredicted RBP13.13□□□□□ -0.31
SNRPD3-204ENST00000439775 RHOXF1Q8NHV9 184 aa13.13□□□□□ -0.31
SNRPD3-204ENST00000439775 ZNF649Q9BS31 505 aa13.13□□□□□ -0.31
SNRPD3-204ENST00000439775 CLEC7AQ9BXN2 247 aa13.13□□□□□ -0.31
SNRPD3-204ENST00000439775 TMEM133Q9H2Q1 129 aa13.13□□□□□ -0.31
SNRPD3-204ENST00000439775 ZCCHC4Q9H5U6 513 aa13.13□□□□□ -0.31
SNRPD3-204ENST00000439775 ZNF702PQ9H963 129 aa13.13□□□□□ -0.31
SNRPD3-204ENST00000439775 ERVK13-1Q9NX77 482 aa13.13□□□□□ -0.31
SNRPD3-204ENST00000439775 FOXJ3Q9UPW0 622 aa13.13□□□□□ -0.31
SNRPD3-204ENST00000439775 MYRFQ9Y2G1 1151 aa13.13□□□□□ -0.31
SNRPD3-204ENST00000439775 GSTK1Q9Y2Q3 226 aa13.13□□□□□ -0.31
SNRPD3-204ENST00000439775 PCDHGB5Q9Y5G0 923 aa13.13□□□□□ -0.31
SNRPD3-204ENST00000439775 FUOMA2VDF0 154 aa13.12□□□□□ -0.31
SNRPD3-204ENST00000439775 SIRPB1O00241 398 aa13.12□□□□□ -0.31
SNRPD3-204ENST00000439775 ZFPL1O95159 310 aa13.12□□□□□ -0.31
SNRPD3-204ENST00000439775 CSN2P05814 226 aa13.12□□□□□ -0.31
SNRPD3-204ENST00000439775 CALCBP10092 127 aa13.12□□□□□ -0.31
SNRPD3-204ENST00000439775 SNU13P55769 128 aaKnown RBP13.12□□□□□ -0.31
SNRPD3-204ENST00000439775 TRAPPC6BQ86SZ2 158 aa13.12□□□□□ -0.31
SNRPD3-204ENST00000439775 LHFPL3Q86UP9 236 aa13.12□□□□□ -0.31
SNRPD3-204ENST00000439775 PARP16Q8N5Y8 322 aa13.12□□□□□ -0.31
SNRPD3-204ENST00000439775 CHST4Q8NCG5 386 aa13.12□□□□□ -0.31
SNRPD3-204ENST00000439775 OR5D18Q8NGL1 313 aa13.12□□□□□ -0.31
SNRPD3-204ENST00000439775 HAVCR2Q8TDQ0 301 aa13.12□□□□□ -0.31
SNRPD3-204ENST00000439775 SPACA5Q96QH8 159 aa13.12□□□□□ -0.31
SNRPD3-204ENST00000439775 NKX3-1Q99801 234 aaPredicted RBP13.12□□□□□ -0.31
SNRPD3-204ENST00000439775 GAL3ST2Q9H3Q3 398 aa13.12□□□□□ -0.31
SNRPD3-204ENST00000439775 ISG20L2Q9H9L3 353 aaKnown RBP13.12□□□□□ -0.31
SNRPD3-204ENST00000439775 S100A14Q9HCY8 104 aa13.12□□□□□ -0.31
SNRPD3-204ENST00000439775 MRPS18AQ9NVS2 196 aaKnown RBP13.12□□□□□ -0.31
SNRPD3-204ENST00000439775 TRGV10A0A0A0MS01 117 aa13.11□□□□□ -0.31
SNRPD3-204ENST00000439775 LOC100130705A0A1B0GUX0 176 aa13.11□□□□□ -0.31
SNRPD3-204ENST00000439775 F2RL2O00254 374 aa13.11□□□□□ -0.31
SNRPD3-204ENST00000439775 SULT1B1O43704 296 aa13.11□□□□□ -0.31
SNRPD3-204ENST00000439775 CCDC159P0C7I6 412 aa13.11□□□□□ -0.31
SNRPD3-204ENST00000439775 RAB13P51153 203 aa13.11□□□□□ -0.31
SNRPD3-204ENST00000439775 ZP1P60852 638 aa13.11□□□□□ -0.31
SNRPD3-204ENST00000439775 OR52W1Q6IF63 320 aa13.11□□□□□ -0.31
SNRPD3-204ENST00000439775 HEPN1Q6WQI6 88 aa13.11□□□□□ -0.31
SNRPD3-204ENST00000439775 TMEM219Q86XT9 240 aa13.11□□□□□ -0.31
SNRPD3-204ENST00000439775 SERPINA12Q8IW75 414 aa13.11□□□□□ -0.31
SNRPD3-204ENST00000439775 PQLC1Q8N2U9 271 aa13.11□□□□□ -0.31
SNRPD3-204ENST00000439775 OR5D14Q8NGL3 314 aa13.11□□□□□ -0.31
SNRPD3-204ENST00000439775 OR5AK2Q8NH90 309 aa13.11□□□□□ -0.31
SNRPD3-204ENST00000439775 FAM110DQ8TAY7 271 aaPredicted RBP13.11□□□□□ -0.31
SNRPD3-204ENST00000439775 CORO2AQ92828 525 aa13.11□□□□□ -0.31
SNRPD3-204ENST00000439775 SLC29A1Q99808 456 aa13.11□□□□□ -0.31
SNRPD3-204ENST00000439775 SERTAD4Q9NUC0 356 aa13.11□□□□□ -0.31
SNRPD3-204ENST00000439775 TAS2R3Q9NYW6 316 aa13.11□□□□□ -0.31
SNRPD3-204ENST00000439775 TET2Q6N021 2002 aaPredicted RBP13.11□□□□□ -0.31
SNRPD3-204ENST00000439775 VSIG10L2P0DP72 767 aa13.1□□□□□ -0.31
SNRPD3-204ENST00000439775 IL18R1Q13478 541 aa13.1□□□□□ -0.31
SNRPD3-204ENST00000439775 KISS1Q15726 138 aa13.1□□□□□ -0.31
SNRPD3-204ENST00000439775 RNF144BQ7Z419 303 aa13.1□□□□□ -0.31
SNRPD3-204ENST00000439775 RTN4RL2Q86UN3 420 aa13.1□□□□□ -0.31
SNRPD3-204ENST00000439775 OR52I1Q8NGK6 324 aa13.1□□□□□ -0.31
SNRPD3-204ENST00000439775 OR4P4Q8NGL7 312 aa13.1□□□□□ -0.31
SNRPD3-204ENST00000439775 NDNFQ8TB73 568 aa13.1□□□□□ -0.31
SNRPD3-204ENST00000439775 APH1BQ8WW43 257 aa13.1□□□□□ -0.31
SNRPD3-204ENST00000439775 CPNE2Q96FN4 548 aaPredicted RBP13.1□□□□□ -0.31
SNRPD3-204ENST00000439775 PDCD1LG2Q9BQ51 273 aa13.1□□□□□ -0.31
SNRPD3-204ENST00000439775 JAM3Q9BX67 310 aa13.1□□□□□ -0.31
SNRPD3-204ENST00000439775 AMBNQ9NP70 447 aa13.1□□□□□ -0.31
SNRPD3-204ENST00000439775 FAM118AQ9NWS6 357 aa13.1□□□□□ -0.31
SNRPD3-204ENST00000439775 DHDHQ9UQ10 334 aa13.1□□□□□ -0.31
SNRPD3-204ENST00000439775 RPL36Q9Y3U8 105 aaKnown RBP13.1□□□□□ -0.31
SNRPD3-204ENST00000439775 HILPDAQ9Y5L2 63 aa13.1□□□□□ -0.31
SNRPD3-204ENST00000439775 A0A0G2JK05 382 aa13.09□□□□□ -0.31
SNRPD3-204ENST00000439775 ODAMA1E959 279 aa13.09□□□□□ -0.31
SNRPD3-204ENST00000439775 FAM90A22PA8MWA6 464 aa13.09□□□□□ -0.31
SNRPD3-204ENST00000439775 E9PI62 339 aa13.09□□□□□ -0.31
SNRPD3-204ENST00000439775 SLC33A1O00400 549 aaPredicted RBP13.09□□□□□ -0.31
SNRPD3-204ENST00000439775 MMP23AO75900 390 aa13.09□□□□□ -0.31
SNRPD3-204ENST00000439775 OPN1MWP04001 364 aa13.09□□□□□ -0.31
SNRPD3-204ENST00000439775 HCKP08631 526 aa13.09□□□□□ -0.31
SNRPD3-204ENST00000439775 OPN1MW2P0DN77 364 aa13.09□□□□□ -0.31
SNRPD3-204ENST00000439775 OPN1MW3P0DN78 364 aa13.09□□□□□ -0.31
SNRPD3-204ENST00000439775 ZNF44P15621 663 aa13.09□□□□□ -0.31
SNRPD3-204ENST00000439775 HTR1DP28221 377 aa13.09□□□□□ -0.31
SNRPD3-204ENST00000439775 CD34P28906 385 aa13.09□□□□□ -0.31
SNRPD3-204ENST00000439775 GBX2P52951 348 aaPredicted RBP13.09□□□□□ -0.31
SNRPD3-204ENST00000439775 BDH1Q02338 343 aa13.09□□□□□ -0.31
SNRPD3-204ENST00000439775 SLC34A1Q06495 639 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms