RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 ELL3Q9HB65 397 aaPredicted RBP7.46□□□□□ -1.21
HPS4-206ENST00000439453 SIRT7Q9NRC8 400 aa7.46□□□□□ -1.21
HPS4-206ENST00000439453 ZNF701Q9NV72 531 aaPredicted RBP7.46□□□□□ -1.21
HPS4-206ENST00000439453 CDC14CA4D256 554 aa7.46□□□□□ -1.21
HPS4-206ENST00000439453 MS4A18H0YCH9 400 aa7.46□□□□□ -1.21
HPS4-206ENST00000439453 ADAM10O14672 748 aa7.46□□□□□ -1.21
HPS4-206ENST00000439453 TRGC1P0CF51 173 aa7.46□□□□□ -1.21
HPS4-206ENST00000439453 PAX1P15863 534 aa7.46□□□□□ -1.21
HPS4-206ENST00000439453 IL12BP29460 328 aa7.46□□□□□ -1.21
HPS4-206ENST00000439453 RND3P61587 244 aa7.46□□□□□ -1.21
HPS4-206ENST00000439453 EIF3IQ13347 325 aaKnown RBP7.46□□□□□ -1.21
HPS4-206ENST00000439453 MS4A18Q3C1V0 323 aa7.46□□□□□ -1.21
HPS4-206ENST00000439453 ABHD12BQ7Z5M8 362 aaPredicted RBP7.46□□□□□ -1.21
HPS4-206ENST00000439453 MMABQ96EY8 250 aaPredicted RBP7.46□□□□□ -1.21
HPS4-206ENST00000439453 TBL1XR1Q9BZK7 514 aa7.46□□□□□ -1.21
HPS4-206ENST00000439453 PADI1Q9ULC6 663 aa7.46□□□□□ -1.21
HPS4-206ENST00000439453 TPRP12270 2363 aaKnown RBP7.46□□□□□ -1.22
HPS4-206ENST00000439453 NSG1A0A0A6YYJ2 146 aa7.46□□□□□ -1.22
HPS4-206ENST00000439453 FOXI3A8MTJ6 420 aaPredicted RBP7.46□□□□□ -1.22
HPS4-206ENST00000439453 GALNSP34059 522 aa7.46□□□□□ -1.22
HPS4-206ENST00000439453 GLIPR1P48060 266 aa7.46□□□□□ -1.22
HPS4-206ENST00000439453 SP6Q3SY56 376 aa7.46□□□□□ -1.22
HPS4-206ENST00000439453 SPSB3Q6PJ21 355 aa7.46□□□□□ -1.22
HPS4-206ENST00000439453 DTX1Q86Y01 620 aa7.46□□□□□ -1.22
HPS4-206ENST00000439453 ABHD5Q8WTS1 349 aa7.46□□□□□ -1.22
HPS4-206ENST00000439453 FRZBQ92765 325 aa7.46□□□□□ -1.22
HPS4-206ENST00000439453 ZNF501Q96CX3 271 aaPredicted RBP7.46□□□□□ -1.22
HPS4-206ENST00000439453 TVP23CQ96ET8 276 aa7.46□□□□□ -1.22
HPS4-206ENST00000439453 FAM71F1Q96KD3 344 aaPredicted RBP7.46□□□□□ -1.22
HPS4-206ENST00000439453 ABHD14AQ9BUJ0 271 aa7.46□□□□□ -1.22
HPS4-206ENST00000439453 DCAF16Q9NXF7 216 aa7.46□□□□□ -1.22
HPS4-206ENST00000439453 PISDQ9UG56 409 aa7.46□□□□□ -1.22
HPS4-206ENST00000439453 B3GALT1Q9Y5Z6 326 aa7.46□□□□□ -1.22
HPS4-206ENST00000439453 MKRN2OSH3BPM6 223 aa7.46□□□□□ -1.22
HPS4-206ENST00000439453 TNFSF15O95150 251 aa7.46□□□□□ -1.22
HPS4-206ENST00000439453 DAP3P51398 398 aaKnown RBP7.46□□□□□ -1.22
HPS4-206ENST00000439453 CHAF1BQ13112 559 aa7.46□□□□□ -1.22
HPS4-206ENST00000439453 ARMC6Q6NXE6 501 aa7.46□□□□□ -1.22
HPS4-206ENST00000439453 CARFQ8N187 725 aa7.46□□□□□ -1.22
HPS4-206ENST00000439453 OR14K1Q8NGZ2 314 aa7.46□□□□□ -1.22
HPS4-206ENST00000439453 OR5R1Q8NH85 324 aa7.46□□□□□ -1.22
HPS4-206ENST00000439453 STT3BQ8TCJ2 826 aa7.46□□□□□ -1.22
HPS4-206ENST00000439453 ADIPOR1Q96A54 375 aa7.46□□□□□ -1.22
HPS4-206ENST00000439453 PACRGQ96M98 296 aaPredicted RBP7.46□□□□□ -1.22
HPS4-206ENST00000439453 SUCNR1Q9BXA5 334 aa7.46□□□□□ -1.22
HPS4-206ENST00000439453 CHRNA10Q9GZZ6 450 aa7.46□□□□□ -1.22
HPS4-206ENST00000439453 GPR84Q9NQS5 396 aa7.46□□□□□ -1.22
HPS4-206ENST00000439453 MED29Q9NX70 200 aa7.46□□□□□ -1.22
HPS4-206ENST00000439453 POLR1DQ9Y2S0 133 aa7.46□□□□□ -1.22
HPS4-206ENST00000439453 RFNGQ9Y644 331 aa7.46□□□□□ -1.22
HPS4-206ENST00000439453 DHRS7CA6NNS2 312 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 SERPINE3A8MV23 424 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 ALG1L2C9J202 215 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 FTCDNL1E5RQL4 147 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 RRP8O43159 456 aaKnown RBP7.45□□□□□ -1.22
HPS4-206ENST00000439453 IL2RGP31785 369 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 ASCL1P50553 236 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 PIGPP57054 158 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 SRSF6Q13247 344 aaKnown RBP7.45□□□□□ -1.22
HPS4-206ENST00000439453 IL13RA2Q14627 380 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 TMEM187Q14656 261 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 DMRTC1Q5HYR2 192 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 GRINAQ7Z429 371 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 LYZL2Q7Z4W2 148 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 C1QL2Q7Z5L3 287 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 OR8B12Q8NGG6 310 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 OR5D18Q8NGL1 313 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 OR2G3Q8NGZ4 309 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 GPR119Q8TDV5 335 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 NEU1Q99519 415 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 DDA1Q9BW61 102 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 SLC25A31Q9H0C2 315 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 TP53TG5Q9Y2B4 290 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 LIPGQ9Y5X9 500 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 PKD1L2Q7Z442 2459 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 SMCO3A2RU48 225 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 TCAPO15273 167 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 OR5AC1P0C628 307 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 FGF5P12034 268 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 TMEM176BQ3YBM2 270 aaPredicted RBP7.45□□□□□ -1.22
HPS4-206ENST00000439453 ZNF385CQ66K41 422 aaPredicted RBP7.45□□□□□ -1.22
HPS4-206ENST00000439453 SLC22A25Q6T423 547 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 TIPARPQ7Z3E1 657 aaKnown RBP7.45□□□□□ -1.22
HPS4-206ENST00000439453 TGIF2LXQ8IUE1 241 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 AGBL5Q8NDL9 886 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 MVB12AQ96EY5 273 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 STRADBQ9C0K7 418 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 MOB1AQ9H8S9 216 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 KIAA1456Q9P272 454 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 TCFL5Q9UL49 500 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 RAXQ9Y2V3 346 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 IGKV1-9A0A0C4DH69 117 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 A0A1W2PQD3 144 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 ST8SIA3O43173 380 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 OR5H8P0DN80 308 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 ZNF17P17021 662 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 RAB4BP61018 213 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 POU3F1Q03052 451 aaPredicted RBP7.45□□□□□ -1.22
HPS4-206ENST00000439453 ZP4Q12836 540 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 CLN3Q13286 438 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms