RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 VEGFCP49767 419 aa10.6□□□□□ -0.71
SCLT1-202ENST00000439369 GMFBP60983 142 aa10.6□□□□□ -0.71
SCLT1-202ENST00000439369 IL13RA1P78552 427 aa10.6□□□□□ -0.71
SCLT1-202ENST00000439369 PAX5Q02548 391 aa10.6□□□□□ -0.71
SCLT1-202ENST00000439369 PLA2G7Q13093 441 aa10.6□□□□□ -0.71
SCLT1-202ENST00000439369 RBM39Q14498 530 aaKnown RBP10.6□□□□□ -0.71
SCLT1-202ENST00000439369 CARTPTQ16568 116 aa10.6□□□□□ -0.71
SCLT1-202ENST00000439369 C11orf91Q3C1V1 193 aa10.6□□□□□ -0.71
SCLT1-202ENST00000439369 FAM201AQ5SY85 155 aa10.6□□□□□ -0.71
SCLT1-202ENST00000439369 SFRP4Q6FHJ7 346 aaPredicted RBP10.6□□□□□ -0.71
SCLT1-202ENST00000439369 METAP1DQ6UB28 335 aaPredicted RBP10.6□□□□□ -0.71
SCLT1-202ENST00000439369 LAX1Q8IWV1 398 aa10.6□□□□□ -0.71
SCLT1-202ENST00000439369 BATF2Q8N1L9 274 aa10.6□□□□□ -0.71
SCLT1-202ENST00000439369 DEFB108BQ8NET1 73 aa10.6□□□□□ -0.71
SCLT1-202ENST00000439369 OR6Q1Q8NGQ2 317 aa10.6□□□□□ -0.71
SCLT1-202ENST00000439369 FOXC2Q99958 501 aa10.6□□□□□ -0.71
SCLT1-202ENST00000439369 TMEM246Q9BRR3 403 aa10.6□□□□□ -0.71
SCLT1-202ENST00000439369 IL36RNQ9UBH0 155 aa10.6□□□□□ -0.71
SCLT1-202ENST00000439369 MIOXQ9UGB7 285 aa10.6□□□□□ -0.71
SCLT1-202ENST00000439369 DCHS2Q6V1P9 2916 aa10.59□□□□□ -0.71
SCLT1-202ENST00000439369 IGHV3OR15-7A0A075B7D8 119 aa10.59□□□□□ -0.71
SCLT1-202ENST00000439369 A0A0A6YYD4 124 aa10.59□□□□□ -0.71
SCLT1-202ENST00000439369 SERPINE3A8MV23 424 aa10.59□□□□□ -0.71
SCLT1-202ENST00000439369 FAM25AB3EWG3 89 aa10.59□□□□□ -0.71
SCLT1-202ENST00000439369 FAM25CB3EWG5 89 aa10.59□□□□□ -0.71
SCLT1-202ENST00000439369 FAM25GB3EWG6 89 aa10.59□□□□□ -0.71
SCLT1-202ENST00000439369 GPR37O15354 613 aa10.59□□□□□ -0.71
SCLT1-202ENST00000439369 OR2H2O95918 312 aa10.59□□□□□ -0.71
SCLT1-202ENST00000439369 CSN2P05814 226 aa10.59□□□□□ -0.71
SCLT1-202ENST00000439369 GSTP1P09211 210 aaKnown RBP10.59□□□□□ -0.71
SCLT1-202ENST00000439369 ZNF44P15621 663 aa10.59□□□□□ -0.71
SCLT1-202ENST00000439369 GABRR1P24046 479 aa10.59□□□□□ -0.71
SCLT1-202ENST00000439369 BLVRBP30043 206 aaPredicted RBP10.59□□□□□ -0.71
SCLT1-202ENST00000439369 TNFSF8P32971 234 aa10.59□□□□□ -0.71
SCLT1-202ENST00000439369 ETV6P41212 452 aa10.59□□□□□ -0.71
SCLT1-202ENST00000439369 SIGIRRQ6IA17 410 aa10.59□□□□□ -0.71
SCLT1-202ENST00000439369 NLRC3Q7RTR2 1065 aa10.59□□□□□ -0.71
SCLT1-202ENST00000439369 BIVMQ86UB2 503 aa10.59□□□□□ -0.71
SCLT1-202ENST00000439369 CD177Q8N6Q3 437 aa10.59□□□□□ -0.71
SCLT1-202ENST00000439369 OR5D13Q8NGL4 314 aa10.59□□□□□ -0.71
SCLT1-202ENST00000439369 RAB3CQ96E17 227 aa10.59□□□□□ -0.71
SCLT1-202ENST00000439369 SEH1LQ96EE3 360 aa10.59□□□□□ -0.71
SCLT1-202ENST00000439369 SNX22Q96L94 193 aa10.59□□□□□ -0.71
SCLT1-202ENST00000439369 NICN1Q9BSH3 213 aa10.59□□□□□ -0.71
SCLT1-202ENST00000439369 OR14J1Q9UGF5 321 aa10.59□□□□□ -0.71
SCLT1-202ENST00000439369 FBN2P35556 2912 aa10.59□□□□□ -0.71
SCLT1-202ENST00000439369 TRAV24A0A0B4J272 114 aa10.58□□□□□ -0.72
SCLT1-202ENST00000439369 ISPDA4D126 451 aa10.58□□□□□ -0.72
SCLT1-202ENST00000439369 CEACAM18A8MTB9 384 aa10.58□□□□□ -0.72
SCLT1-202ENST00000439369 MCRIP1C9JLW8 97 aa10.58□□□□□ -0.72
SCLT1-202ENST00000439369 F5H0A9 414 aaPredicted RBP10.58□□□□□ -0.72
SCLT1-202ENST00000439369 K7N7A8 449 aa10.58□□□□□ -0.72
SCLT1-202ENST00000439369 SLC33A1O00400 549 aaPredicted RBP10.58□□□□□ -0.72
SCLT1-202ENST00000439369 MFNGO00587 321 aa10.58□□□□□ -0.72
SCLT1-202ENST00000439369 SOCS1O15524 211 aa10.58□□□□□ -0.72
SCLT1-202ENST00000439369 ZNF737O75373 536 aa10.58□□□□□ -0.72
SCLT1-202ENST00000439369 ZNF205O95201 554 aa10.58□□□□□ -0.72
SCLT1-202ENST00000439369 GYPAP02724 150 aa10.58□□□□□ -0.72
SCLT1-202ENST00000439369 HIST1H1DP16402 221 aaKnown RBP10.58□□□□□ -0.72
SCLT1-202ENST00000439369 AMY2BP19961 511 aa10.58□□□□□ -0.72
SCLT1-202ENST00000439369 CDK2P24941 298 aa10.58□□□□□ -0.72
SCLT1-202ENST00000439369 DUSP1P28562 367 aa10.58□□□□□ -0.72
SCLT1-202ENST00000439369 SNU13P55769 128 aaKnown RBP10.58□□□□□ -0.72
SCLT1-202ENST00000439369 TMEM50BP56557 158 aa10.58□□□□□ -0.72
SCLT1-202ENST00000439369 COL10A1Q03692 680 aa10.58□□□□□ -0.72
SCLT1-202ENST00000439369 PNLIPRP3Q17RR3 467 aa10.58□□□□□ -0.72
SCLT1-202ENST00000439369 CLEC12BQ2HXU8 276 aa10.58□□□□□ -0.72
SCLT1-202ENST00000439369 PAN3Q58A45 887 aaKnown RBP10.58□□□□□ -0.72
SCLT1-202ENST00000439369 TMEM69Q5SWH9 247 aa10.58□□□□□ -0.72
SCLT1-202ENST00000439369 AVPI1Q5T686 147 aa10.58□□□□□ -0.72
SCLT1-202ENST00000439369 CNIH2Q6PI25 160 aa10.58□□□□□ -0.72
SCLT1-202ENST00000439369 Q6ZTK2 550 aa10.58□□□□□ -0.72
SCLT1-202ENST00000439369 CCDC190Q86UF4 302 aa10.58□□□□□ -0.72
SCLT1-202ENST00000439369 SUMF2Q8NBJ7 301 aa10.58□□□□□ -0.72
SCLT1-202ENST00000439369 OR5T2Q8NGG2 359 aa10.58□□□□□ -0.72
SCLT1-202ENST00000439369 NEIL1Q96FI4 390 aaPredicted RBP10.58□□□□□ -0.72
SCLT1-202ENST00000439369 DIRAS2Q96HU8 199 aa10.58□□□□□ -0.72
SCLT1-202ENST00000439369 GAFA1Q96PS6 74 aa10.58□□□□□ -0.72
SCLT1-202ENST00000439369 DPCDQ9BVM2 203 aaPredicted RBP10.58□□□□□ -0.72
SCLT1-202ENST00000439369 BPESC1Q9GZL8 116 aa10.58□□□□□ -0.72
SCLT1-202ENST00000439369 RIMS4Q9H426 269 aaPredicted RBP10.58□□□□□ -0.72
SCLT1-202ENST00000439369 NCOR1P1Q9H4R4 102 aa10.58□□□□□ -0.72
SCLT1-202ENST00000439369 PATZ1Q9HBE1 687 aaKnown RBP10.58□□□□□ -0.72
SCLT1-202ENST00000439369 PLEKHJ1Q9NW61 149 aa10.58□□□□□ -0.72
SCLT1-202ENST00000439369 EXTL2Q9UBQ6 330 aa10.58□□□□□ -0.72
SCLT1-202ENST00000439369 UNC79Q9P2D8 2635 aa10.58□□□□□ -0.72
SCLT1-202ENST00000439369 USF3Q68DE3 2245 aa10.57□□□□□ -0.72
SCLT1-202ENST00000439369 FUOMA2VDF0 154 aa10.57□□□□□ -0.72
SCLT1-202ENST00000439369 H7C1Q1 480 aa10.57□□□□□ -0.72
SCLT1-202ENST00000439369 SIRPB1O00241 398 aa10.57□□□□□ -0.72
SCLT1-202ENST00000439369 MGST3O14880 152 aa10.57□□□□□ -0.72
SCLT1-202ENST00000439369 TMPRSS2O15393 492 aa10.57□□□□□ -0.72
SCLT1-202ENST00000439369 ADAM20O43506 726 aa10.57□□□□□ -0.72
SCLT1-202ENST00000439369 NDUFB3O43676 98 aa10.57□□□□□ -0.72
SCLT1-202ENST00000439369 TK1P04183 234 aa10.57□□□□□ -0.72
SCLT1-202ENST00000439369 HEXAP06865 529 aa10.57□□□□□ -0.72
SCLT1-202ENST00000439369 MELTFP08582 738 aa10.57□□□□□ -0.72
SCLT1-202ENST00000439369 WNT2P09544 360 aa10.57□□□□□ -0.72
SCLT1-202ENST00000439369 GABRA2P47869 451 aa10.57□□□□□ -0.72
SCLT1-202ENST00000439369 NPY4RP50391 375 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms