RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 A0A1W2PRD5 423 aa20.21■□□□□ 0.83
RAPGEF1-206ENST00000438647 A0A1W2PRF3 423 aa20.21■□□□□ 0.83
RAPGEF1-206ENST00000438647 A0A1W2PRM7 423 aa20.21■□□□□ 0.83
RAPGEF1-206ENST00000438647 hADV38S2A0JD32 116 aa20.21■□□□□ 0.83
RAPGEF1-206ENST00000438647 MGST3O14880 152 aa20.21■□□□□ 0.83
RAPGEF1-206ENST00000438647 RBP4P02753 201 aa20.21■□□□□ 0.83
RAPGEF1-206ENST00000438647 ALDOBP05062 364 aa20.21■□□□□ 0.83
RAPGEF1-206ENST00000438647 CRYBA1P05813 215 aa20.21■□□□□ 0.83
RAPGEF1-206ENST00000438647 MTNR1BP49286 362 aa20.21■□□□□ 0.83
RAPGEF1-206ENST00000438647 SATL1Q86VE3 508 aa20.21■□□□□ 0.83
RAPGEF1-206ENST00000438647 OR51A2Q8NGJ7 313 aa20.21■□□□□ 0.83
RAPGEF1-206ENST00000438647 CHIAQ9BZP6 476 aa20.21■□□□□ 0.83
RAPGEF1-206ENST00000438647 CHST6Q9GZX3 395 aa20.21■□□□□ 0.83
RAPGEF1-206ENST00000438647 TMEM138Q9NPI0 162 aa20.21■□□□□ 0.83
RAPGEF1-206ENST00000438647 SCN3BQ9NY72 215 aa20.21■□□□□ 0.83
RAPGEF1-206ENST00000438647 ZNRD1Q9P1U0 126 aa20.21■□□□□ 0.83
RAPGEF1-206ENST00000438647 CKLFQ9UBR5 152 aa20.21■□□□□ 0.83
RAPGEF1-206ENST00000438647 BTBD17A6NE02 478 aa20.2■□□□□ 0.82
RAPGEF1-206ENST00000438647 C17orf98A8MV24 154 aa20.2■□□□□ 0.82
RAPGEF1-206ENST00000438647 PSPNO60542 156 aa20.2■□□□□ 0.82
RAPGEF1-206ENST00000438647 OR2H2O95918 312 aa20.2■□□□□ 0.82
RAPGEF1-206ENST00000438647 ZNF728P0DKX0 622 aa20.2■□□□□ 0.82
RAPGEF1-206ENST00000438647 CFPP27918 469 aa20.2■□□□□ 0.82
RAPGEF1-206ENST00000438647 IER3P46695 156 aa20.2■□□□□ 0.82
RAPGEF1-206ENST00000438647 RPL15P61313 204 aaKnown RBP20.2■□□□□ 0.82
RAPGEF1-206ENST00000438647 Q499Y3 187 aa20.2■□□□□ 0.82
RAPGEF1-206ENST00000438647 C6orf141Q5SZD1 244 aa20.2■□□□□ 0.82
RAPGEF1-206ENST00000438647 ASPHD2Q6ICH7 369 aa20.2■□□□□ 0.82
RAPGEF1-206ENST00000438647 C11orf42Q8N5U0 333 aa20.2■□□□□ 0.82
RAPGEF1-206ENST00000438647 ZFP41Q8N8Y5 198 aa20.2■□□□□ 0.82
RAPGEF1-206ENST00000438647 CHST4Q8NCG5 386 aa20.2■□□□□ 0.82
RAPGEF1-206ENST00000438647 OR52N4Q8NGI2 321 aa20.2■□□□□ 0.82
RAPGEF1-206ENST00000438647 TNFAIP8L1Q8WVP5 186 aa20.2■□□□□ 0.82
RAPGEF1-206ENST00000438647 PGLYRP3Q96LB9 341 aa20.2■□□□□ 0.82
RAPGEF1-206ENST00000438647 ZNF714Q96N38 554 aa20.2■□□□□ 0.82
RAPGEF1-206ENST00000438647 LINC00312Q9Y6C7 94 aa20.2■□□□□ 0.82
RAPGEF1-206ENST00000438647 TRBV5-5A0A0J9YX44 114 aa20.19■□□□□ 0.82
RAPGEF1-206ENST00000438647 FUOMA2VDF0 154 aa20.19■□□□□ 0.82
RAPGEF1-206ENST00000438647 FAM181BA6NEQ2 426 aa20.19■□□□□ 0.82
RAPGEF1-206ENST00000438647 SIRPB1O00241 398 aa20.19■□□□□ 0.82
RAPGEF1-206ENST00000438647 IGHV4-59P01825 116 aa20.19■□□□□ 0.82
RAPGEF1-206ENST00000438647 ZNF44P15621 663 aa20.19■□□□□ 0.82
RAPGEF1-206ENST00000438647 LMO1P25800 156 aa20.19■□□□□ 0.82
RAPGEF1-206ENST00000438647 ERP29P30040 261 aaKnown RBP20.19■□□□□ 0.82
RAPGEF1-206ENST00000438647 HCP5Q6MZN7 132 aa20.19■□□□□ 0.82
RAPGEF1-206ENST00000438647 PNKDQ8N490 385 aa20.19■□□□□ 0.82
RAPGEF1-206ENST00000438647 NANOGP1Q8N7R0 232 aa20.19■□□□□ 0.82
RAPGEF1-206ENST00000438647 DYRK2Q92630 601 aa20.19■□□□□ 0.82
RAPGEF1-206ENST00000438647 MYDGFQ969H8 173 aa20.19■□□□□ 0.82
RAPGEF1-206ENST00000438647 FAM192AQ9GZU8 254 aa20.19■□□□□ 0.82
RAPGEF1-206ENST00000438647 GABRPO00591 440 aa20.18■□□□□ 0.82
RAPGEF1-206ENST00000438647 CDK1P06493 297 aa20.18■□□□□ 0.82
RAPGEF1-206ENST00000438647 BDKRB2P30411 391 aa20.18■□□□□ 0.82
RAPGEF1-206ENST00000438647 OR3A1P47881 315 aa20.18■□□□□ 0.82
RAPGEF1-206ENST00000438647 DLX6P56179 175 aa20.18■□□□□ 0.82
RAPGEF1-206ENST00000438647 RIPK1Q13546 671 aa20.18■□□□□ 0.82
RAPGEF1-206ENST00000438647 DDI2Q5TDH0 399 aa20.18■□□□□ 0.82
RAPGEF1-206ENST00000438647 RNLSQ5VYX0 342 aa20.18■□□□□ 0.82
RAPGEF1-206ENST00000438647 ELP2Q6IA86 826 aa20.18■□□□□ 0.82
RAPGEF1-206ENST00000438647 OR4S1Q8NGB4 309 aa20.18■□□□□ 0.82
RAPGEF1-206ENST00000438647 OR13C5Q8NGS8 318 aa20.18■□□□□ 0.82
RAPGEF1-206ENST00000438647 THRSPQ92748 146 aa20.18■□□□□ 0.82
RAPGEF1-206ENST00000438647 MND1Q9BWT6 205 aa20.18■□□□□ 0.82
RAPGEF1-206ENST00000438647 PTGES3LE9PB15 166 aa20.17■□□□□ 0.82
RAPGEF1-206ENST00000438647 CD1AP06126 327 aa20.17■□□□□ 0.82
RAPGEF1-206ENST00000438647 CELP19835 753 aa20.17■□□□□ 0.82
RAPGEF1-206ENST00000438647 ZNF93P35789 620 aaPredicted RBP20.17■□□□□ 0.82
RAPGEF1-206ENST00000438647 P2RX3P56373 397 aa20.17■□□□□ 0.82
RAPGEF1-206ENST00000438647 LGALS4P56470 323 aa20.17■□□□□ 0.82
RAPGEF1-206ENST00000438647 BDH1Q02338 343 aa20.17■□□□□ 0.82
RAPGEF1-206ENST00000438647 RSU1Q15404 277 aa20.17■□□□□ 0.82
RAPGEF1-206ENST00000438647 ZNF782Q6ZMW2 699 aaPredicted RBP20.17■□□□□ 0.82
RAPGEF1-206ENST00000438647 OR13D1Q8NGV5 346 aa20.17■□□□□ 0.82
RAPGEF1-206ENST00000438647 TENM1Q9UKZ4 2725 aa20.17■□□□□ 0.82
RAPGEF1-206ENST00000438647 PNMA8CA0A1B0GUJ8 204 aa20.16■□□□□ 0.82
RAPGEF1-206ENST00000438647 DEGS1O15121 323 aa20.16■□□□□ 0.82
RAPGEF1-206ENST00000438647 GPX5O75715 221 aa20.16■□□□□ 0.82
RAPGEF1-206ENST00000438647 FSTP19883 344 aa20.16■□□□□ 0.82
RAPGEF1-206ENST00000438647 COX7A1P24310 79 aa20.16■□□□□ 0.82
RAPGEF1-206ENST00000438647 PTGFRP43088 359 aa20.16■□□□□ 0.82
RAPGEF1-206ENST00000438647 HSPA13P48723 471 aa20.16■□□□□ 0.82
RAPGEF1-206ENST00000438647 RPS11P62280 158 aaKnown RBP eCLIP20.16■□□□□ 0.82
RAPGEF1-206ENST00000438647 SCN1BQ07699 218 aa20.16■□□□□ 0.82
RAPGEF1-206ENST00000438647 GDPGP1Q6ZNW5 385 aa20.16■□□□□ 0.82
RAPGEF1-206ENST00000438647 TPRX1Q8N7U7 411 aa20.16■□□□□ 0.82
RAPGEF1-206ENST00000438647 BEND2Q8NDZ0 799 aa20.16■□□□□ 0.82
RAPGEF1-206ENST00000438647 OR5R1Q8NH85 324 aa20.16■□□□□ 0.82
RAPGEF1-206ENST00000438647 S100A13Q99584 98 aa20.16■□□□□ 0.82
RAPGEF1-206ENST00000438647 ANKRD60Q9BZ19 345 aa20.16■□□□□ 0.82
RAPGEF1-206ENST00000438647 PAK1IP1Q9NWT1 392 aaPredicted RBP20.16■□□□□ 0.82
RAPGEF1-206ENST00000438647 TPRKBQ9Y3C4 175 aa20.16■□□□□ 0.82
RAPGEF1-206ENST00000438647 A0A0G2JK05 382 aa20.15■□□□□ 0.82
RAPGEF1-206ENST00000438647 CSN2P05814 226 aa20.15■□□□□ 0.82
RAPGEF1-206ENST00000438647 IGFBP3P17936 291 aaPredicted RBP20.15■□□□□ 0.82
RAPGEF1-206ENST00000438647 MYF6P23409 242 aa20.15■□□□□ 0.82
RAPGEF1-206ENST00000438647 IL13RA2Q14627 380 aa20.15■□□□□ 0.82
RAPGEF1-206ENST00000438647 Q6P435 159 aa20.15■□□□□ 0.82
RAPGEF1-206ENST00000438647 TCF23Q7RTU1 214 aa20.15■□□□□ 0.82
RAPGEF1-206ENST00000438647 TRAPPC6BQ86SZ2 158 aa20.15■□□□□ 0.82
RAPGEF1-206ENST00000438647 OR14A2Q96R54 314 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms