RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 ISOC2Q96AB3 205 aa10.31□□□□□ -0.76
PTCH1-209ENST00000437951 HIST1H4GQ99525 98 aa10.31□□□□□ -0.76
PTCH1-209ENST00000437951 PHIPQ8WWQ0 1821 aa10.31□□□□□ -0.76
PTCH1-209ENST00000437951 IER3P46695 156 aa10.31□□□□□ -0.76
PTCH1-209ENST00000437951 TMEM65Q6PI78 240 aa10.31□□□□□ -0.76
PTCH1-209ENST00000437951 CALHM1Q8IU99 346 aa10.31□□□□□ -0.76
PTCH1-209ENST00000437951 ETFBKMTQ8IXQ9 262 aa10.31□□□□□ -0.76
PTCH1-209ENST00000437951 B9D1Q9UPM9 204 aa10.31□□□□□ -0.76
PTCH1-209ENST00000437951 GNG3P63215 75 aa10.31□□□□□ -0.76
PTCH1-209ENST00000437951 GAMTQ14353 236 aa10.31□□□□□ -0.76
PTCH1-209ENST00000437951 P2RX4Q99571 388 aa10.31□□□□□ -0.76
PTCH1-209ENST00000437951 FRG2CA6NGY1 282 aa10.31□□□□□ -0.76
PTCH1-209ENST00000437951 CEACAM6P40199 344 aa10.31□□□□□ -0.76
PTCH1-209ENST00000437951 ZNF260Q3ZCT1 412 aa10.31□□□□□ -0.76
PTCH1-209ENST00000437951 MS4A6EQ96DS6 147 aa10.31□□□□□ -0.76
PTCH1-209ENST00000437951 RBM38Q9H0Z9 239 aaKnown RBP10.31□□□□□ -0.76
PTCH1-209ENST00000437951 A0A1B0GU03 582 aa10.31□□□□□ -0.76
PTCH1-209ENST00000437951 CSNK1EP49674 416 aaKnown RBP10.31□□□□□ -0.76
PTCH1-209ENST00000437951 PRDX4Q13162 271 aa10.31□□□□□ -0.76
PTCH1-209ENST00000437951 OR4S2Q8NH73 311 aa10.31□□□□□ -0.76
PTCH1-209ENST00000437951 GUCD1Q96NT3 240 aa10.31□□□□□ -0.76
PTCH1-209ENST00000437951 SLC25A37Q9NYZ2 338 aa10.31□□□□□ -0.76
PTCH1-209ENST00000437951 OPN4Q9UHM6 478 aa10.31□□□□□ -0.76
PTCH1-209ENST00000437951 FBLL1A6NHQ2 334 aaKnown RBP10.3□□□□□ -0.76
PTCH1-209ENST00000437951 CDS2O95674 445 aa10.3□□□□□ -0.76
PTCH1-209ENST00000437951 GUCA2AQ02747 115 aa10.3□□□□□ -0.76
PTCH1-209ENST00000437951 OR8B3Q8NGG8 313 aa10.3□□□□□ -0.76
PTCH1-209ENST00000437951 MISP3Q96FF7 219 aa10.3□□□□□ -0.76
PTCH1-209ENST00000437951 HS3ST3A1Q9Y663 406 aa10.3□□□□□ -0.76
PTCH1-209ENST00000437951 MYOFQ9NZM1 2061 aa10.3□□□□□ -0.76
PTCH1-209ENST00000437951 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.3□□□□□ -0.76
PTCH1-209ENST00000437951 HRO43593 1189 aa10.3□□□□□ -0.76
PTCH1-209ENST00000437951 CDC14BO60729 498 aa10.3□□□□□ -0.76
PTCH1-209ENST00000437951 CDX1P47902 265 aaPredicted RBP10.3□□□□□ -0.76
PTCH1-209ENST00000437951 FGF8P55075 233 aaPredicted RBP10.3□□□□□ -0.76
PTCH1-209ENST00000437951 METRNLQ641Q3 311 aa10.3□□□□□ -0.76
PTCH1-209ENST00000437951 LINC00596Q86U02 117 aa10.3□□□□□ -0.76
PTCH1-209ENST00000437951 DAPP1Q9UN19 280 aa10.3□□□□□ -0.76
PTCH1-209ENST00000437951 LRP12Q9Y561 859 aa10.3□□□□□ -0.76
PTCH1-209ENST00000437951 ZNF407Q9C0G0 2248 aa10.3□□□□□ -0.76
PTCH1-209ENST00000437951 LPAR6P43657 344 aa10.3□□□□□ -0.76
PTCH1-209ENST00000437951 GAB4Q2WGN9 574 aa10.3□□□□□ -0.76
PTCH1-209ENST00000437951 RTP2Q5QGT7 225 aa10.3□□□□□ -0.76
PTCH1-209ENST00000437951 SAMD13Q5VXD3 122 aa10.3□□□□□ -0.76
PTCH1-209ENST00000437951 WIPI2Q9Y4P8 454 aa10.3□□□□□ -0.76
PTCH1-209ENST00000437951 LAMB1P07942 1786 aa10.3□□□□□ -0.76
PTCH1-209ENST00000437951 NUDT3O95989 172 aa10.3□□□□□ -0.76
PTCH1-209ENST00000437951 JAG1P78504 1218 aa10.3□□□□□ -0.76
PTCH1-209ENST00000437951 HFEQ30201 348 aa10.3□□□□□ -0.76
PTCH1-209ENST00000437951 TMEM52BQ4KMG9 183 aa10.3□□□□□ -0.76
PTCH1-209ENST00000437951 C12orf76Q8N812 135 aaPredicted RBP10.3□□□□□ -0.76
PTCH1-209ENST00000437951 RPEQ96AT9 228 aa10.3□□□□□ -0.76
PTCH1-209ENST00000437951 C1QTNF6Q9BXI9 259 aa10.3□□□□□ -0.76
PTCH1-209ENST00000437951 GAL3ST2Q9H3Q3 398 aa10.3□□□□□ -0.76
PTCH1-209ENST00000437951 GAPDHP04406 335 aaKnown RBP10.3□□□□□ -0.76
PTCH1-209ENST00000437951 POU2F2P09086 479 aa10.3□□□□□ -0.76
PTCH1-209ENST00000437951 MVB12AQ96EY5 273 aa10.3□□□□□ -0.76
PTCH1-209ENST00000437951 RECKO95980 971 aa10.3□□□□□ -0.76
PTCH1-209ENST00000437951 IL4P05112 153 aa10.3□□□□□ -0.76
PTCH1-209ENST00000437951 SIRT6Q8N6T7 355 aa10.3□□□□□ -0.76
PTCH1-209ENST00000437951 ZBTB34Q8NCN2 500 aa10.3□□□□□ -0.76
PTCH1-209ENST00000437951 ZNF707Q96C28 371 aaPredicted RBP10.3□□□□□ -0.76
PTCH1-209ENST00000437951 SNRNP40Q96DI7 357 aaKnown RBP10.3□□□□□ -0.76
PTCH1-209ENST00000437951 KCNK7Q9Y2U2 307 aa10.3□□□□□ -0.76
PTCH1-209ENST00000437951 FAM186AA6NE01 2351 aa10.3□□□□□ -0.76
PTCH1-209ENST00000437951 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.3□□□□□ -0.76
PTCH1-209ENST00000437951 PTGESO14684 152 aa10.3□□□□□ -0.76
PTCH1-209ENST00000437951 SNAI1O95863 264 aaPredicted RBP10.3□□□□□ -0.76
PTCH1-209ENST00000437951 KLRB1Q12918 225 aa10.3□□□□□ -0.76
PTCH1-209ENST00000437951 ZNF273Q14593 569 aa10.3□□□□□ -0.76
PTCH1-209ENST00000437951 KIF26BQ2KJY2 2108 aa10.3□□□□□ -0.76
PTCH1-209ENST00000437951 FAM219AQ8IW50 185 aa10.3□□□□□ -0.76
PTCH1-209ENST00000437951 RBM14Q96PK6 669 aaKnown RBP10.3□□□□□ -0.76
PTCH1-209ENST00000437951 HSPB9Q9BQS6 159 aa10.3□□□□□ -0.76
PTCH1-209ENST00000437951 POLEQ07864 2286 aa10.3□□□□□ -0.76
PTCH1-209ENST00000437951 GFYI3L273 518 aa10.29□□□□□ -0.76
PTCH1-209ENST00000437951 HLA-DRB1P01911 266 aa10.29□□□□□ -0.76
PTCH1-209ENST00000437951 TNFRSF1AP19438 455 aa10.29□□□□□ -0.76
PTCH1-209ENST00000437951 HINT1P49773 126 aaPredicted RBP10.29□□□□□ -0.76
PTCH1-209ENST00000437951 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.29□□□□□ -0.76
PTCH1-209ENST00000437951 CHD3Q12873 2000 aaKnown RBP10.29□□□□□ -0.76
PTCH1-209ENST00000437951 CLDN2P57739 230 aa10.29□□□□□ -0.76
PTCH1-209ENST00000437951 TTC9BQ8N6N2 239 aa10.29□□□□□ -0.76
PTCH1-209ENST00000437951 TREM2Q9NZC2 230 aa10.29□□□□□ -0.76
PTCH1-209ENST00000437951 SIGLEC5O15389 551 aa10.29□□□□□ -0.76
PTCH1-209ENST00000437951 HSPB1P04792 205 aaKnown RBP10.29□□□□□ -0.76
PTCH1-209ENST00000437951 TMEM179BQ7Z7N9 219 aa10.29□□□□□ -0.76
PTCH1-209ENST00000437951 ZNF740Q8NDX6 193 aa10.29□□□□□ -0.76
PTCH1-209ENST00000437951 ARHGAP5-AS1Q96IT6 56 aa10.29□□□□□ -0.76
PTCH1-209ENST00000437951 MYOZ1Q9NP98 299 aaPredicted RBP10.29□□□□□ -0.76
PTCH1-209ENST00000437951 HMX2A2RU54 273 aa10.29□□□□□ -0.76
PTCH1-209ENST00000437951 H3BMH7 237 aa10.29□□□□□ -0.76
PTCH1-209ENST00000437951 LYZL6O75951 148 aa10.29□□□□□ -0.76
PTCH1-209ENST00000437951 CSN3P07498 182 aa10.29□□□□□ -0.76
PTCH1-209ENST00000437951 VDAC1P21796 283 aa10.29□□□□□ -0.76
PTCH1-209ENST00000437951 COMPP49747 757 aaPredicted RBP10.29□□□□□ -0.76
PTCH1-209ENST00000437951 PRRX1P54821 245 aa10.29□□□□□ -0.76
PTCH1-209ENST00000437951 NTHL1P78549 312 aa10.29□□□□□ -0.76
PTCH1-209ENST00000437951 MRGPREQ86SM8 312 aa10.29□□□□□ -0.76
PTCH1-209ENST00000437951 OR1F12Q8NHA8 337 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms