RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 IGLV3-1P01715 115 aa8.18□□□□□ -1.1
CUX1-206ENST00000437600 APOC1P02654 83 aa8.18□□□□□ -1.1
CUX1-206ENST00000437600 OR5H8P0DN80 308 aa8.18□□□□□ -1.1
CUX1-206ENST00000437600 EDN3P14138 238 aa8.18□□□□□ -1.1
CUX1-206ENST00000437600 ID4P47928 161 aa8.18□□□□□ -1.1
CUX1-206ENST00000437600 RBP2P50120 134 aa8.18□□□□□ -1.1
CUX1-206ENST00000437600 MEOX2P50222 304 aa8.18□□□□□ -1.1
CUX1-206ENST00000437600 CLDN18P56856 261 aa8.18□□□□□ -1.1
CUX1-206ENST00000437600 FGL1Q08830 312 aa8.18□□□□□ -1.1
CUX1-206ENST00000437600 SPATA46Q5T0L3 261 aa8.18□□□□□ -1.1
CUX1-206ENST00000437600 PLCXD3Q63HM9 321 aa8.18□□□□□ -1.1
CUX1-206ENST00000437600 OR2A2Q6IF42 318 aa8.18□□□□□ -1.1
CUX1-206ENST00000437600 OR10AD1Q8NGE0 317 aa8.18□□□□□ -1.1
CUX1-206ENST00000437600 OR5T2Q8NGG2 359 aa8.18□□□□□ -1.1
CUX1-206ENST00000437600 ZNF488Q96MN9 340 aa8.18□□□□□ -1.1
CUX1-206ENST00000437600 CMSS1Q9BQ75 279 aaKnown RBP8.18□□□□□ -1.1
CUX1-206ENST00000437600 ZNF552Q9H707 407 aaPredicted RBP8.18□□□□□ -1.1
CUX1-206ENST00000437600 PARPBPQ9NWS1 579 aa8.18□□□□□ -1.1
CUX1-206ENST00000437600 COA4Q9NYJ1 87 aa8.18□□□□□ -1.1
CUX1-206ENST00000437600 B4GALT7Q9UBV7 327 aa8.18□□□□□ -1.1
CUX1-206ENST00000437600 PURGQ9UJV8 347 aaKnown RBP8.18□□□□□ -1.1
CUX1-206ENST00000437600 MED12LQ86YW9 2145 aa8.18□□□□□ -1.1
CUX1-206ENST00000437600 LILRA1O75019 489 aa8.18□□□□□ -1.1
CUX1-206ENST00000437600 SFT2D2O95562 160 aa8.18□□□□□ -1.1
CUX1-206ENST00000437600 CPT2P23786 658 aa8.18□□□□□ -1.1
CUX1-206ENST00000437600 AGTR1P30556 359 aa8.18□□□□□ -1.1
CUX1-206ENST00000437600 PTGER4P35408 488 aa8.18□□□□□ -1.1
CUX1-206ENST00000437600 THBS4P35443 961 aa8.18□□□□□ -1.1
CUX1-206ENST00000437600 PP6455Q8WZ26 134 aa8.18□□□□□ -1.1
CUX1-206ENST00000437600 ASF1BQ9NVP2 202 aa8.18□□□□□ -1.1
CUX1-206ENST00000437600 TIMM10BQ9Y5J6 103 aa8.18□□□□□ -1.1
CUX1-206ENST00000437600 EPG5Q9HCE0 2579 aa8.18□□□□□ -1.1
CUX1-206ENST00000437600 POLEQ07864 2286 aa8.18□□□□□ -1.1
CUX1-206ENST00000437600 MEX3AA1L020 520 aaKnown RBP8.17□□□□□ -1.1
CUX1-206ENST00000437600 DBX1A6NMT0 343 aa8.17□□□□□ -1.1
CUX1-206ENST00000437600 DIRAS3O95661 229 aa8.17□□□□□ -1.1
CUX1-206ENST00000437600 RNF224P0DH78 156 aa8.17□□□□□ -1.1
CUX1-206ENST00000437600 RCC1P18754 421 aaPredicted RBP8.17□□□□□ -1.1
CUX1-206ENST00000437600 GPM6AP51674 278 aa8.17□□□□□ -1.1
CUX1-206ENST00000437600 HIST1H3AP68431 136 aa8.17□□□□□ -1.1
CUX1-206ENST00000437600 RTP5Q14D33 572 aa8.17□□□□□ -1.1
CUX1-206ENST00000437600 AARDQ4LEZ3 155 aa8.17□□□□□ -1.1
CUX1-206ENST00000437600 HIST2H3PS2Q5TEC6 136 aa8.17□□□□□ -1.1
CUX1-206ENST00000437600 Q6ZPA2 131 aa8.17□□□□□ -1.1
CUX1-206ENST00000437600 HIST2H3AQ71DI3 136 aa8.17□□□□□ -1.1
CUX1-206ENST00000437600 UBALD1Q8TB05 177 aa8.17□□□□□ -1.1
CUX1-206ENST00000437600 METTL9Q9H1A3 318 aa8.17□□□□□ -1.1
CUX1-206ENST00000437600 LUZP4Q9P127 313 aa8.17□□□□□ -1.1
CUX1-206ENST00000437600 ZGRF1Q86YA3 2104 aa8.17□□□□□ -1.1
CUX1-206ENST00000437600 TRAV39A0A0B4J263 110 aa8.17□□□□□ -1.1
CUX1-206ENST00000437600 A0A0D9SG52 128 aa8.17□□□□□ -1.1
CUX1-206ENST00000437600 NXPH3O95157 252 aa8.17□□□□□ -1.1
CUX1-206ENST00000437600 SELEP16581 610 aa8.17□□□□□ -1.1
CUX1-206ENST00000437600 RPP30P78346 268 aaKnown RBP8.17□□□□□ -1.1
CUX1-206ENST00000437600 SNTB1Q13884 538 aaKnown RBP8.17□□□□□ -1.1
CUX1-206ENST00000437600 ZNF766Q5HY98 468 aa8.17□□□□□ -1.1
CUX1-206ENST00000437600 OR5L1Q8NGL2 311 aa8.17□□□□□ -1.1
CUX1-206ENST00000437600 EMG1Q92979 244 aaKnown RBP8.17□□□□□ -1.1
CUX1-206ENST00000437600 CPNE4Q96A23 557 aaPredicted RBP8.17□□□□□ -1.1
CUX1-206ENST00000437600 Q96M66 194 aa8.17□□□□□ -1.1
CUX1-206ENST00000437600 FBLN5Q9UBX5 448 aa8.17□□□□□ -1.1
CUX1-206ENST00000437600 PCDHB10Q9UN67 800 aa8.17□□□□□ -1.1
CUX1-206ENST00000437600 OSGIN2Q9Y236 505 aa8.17□□□□□ -1.1
CUX1-206ENST00000437600 CBY1Q9Y3M2 126 aa8.17□□□□□ -1.1
CUX1-206ENST00000437600 LSM5Q9Y4Y9 91 aaKnown RBP8.17□□□□□ -1.1
CUX1-206ENST00000437600 FOXI3A8MTJ6 420 aaPredicted RBP8.16□□□□□ -1.1
CUX1-206ENST00000437600 BCL2L11O43521 198 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 XRCC2O43543 280 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 ATG12O94817 140 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 RPS2P15880 293 aaKnown RBP8.16□□□□□ -1.1
CUX1-206ENST00000437600 FCGR2CP31995 323 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 PIGPP57054 158 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 RAB35Q15286 201 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 IAH1Q2TAA2 248 aaPredicted RBP8.16□□□□□ -1.1
CUX1-206ENST00000437600 VAX1Q5SQQ9 334 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 ABLIM2Q6H8Q1 611 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 ZNF585AQ6P3V2 769 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 SLC22A25Q6T423 547 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 GCNT2Q8N0V5 402 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 ARRDC1Q8N5I2 433 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 BPIFCQ8NFQ6 507 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 OR56B2PQ8NGI1 322 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 C2CD4CQ8TF44 421 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 MRPL24Q96A35 216 aaKnown RBP8.16□□□□□ -1.1
CUX1-206ENST00000437600 CPNE2Q96FN4 548 aaPredicted RBP8.16□□□□□ -1.1
CUX1-206ENST00000437600 ZNF442Q9H7R0 627 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 RASL12Q9NYN1 266 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 NR2C1P13056 603 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 CD46P15529 392 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 RAB13P51153 203 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 HIKESHIQ53FT3 197 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 NUFIP2Q7Z417 695 aaKnown RBP8.16□□□□□ -1.1
CUX1-206ENST00000437600 LYZL2Q7Z4W2 148 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 MYPOPQ86VE0 399 aaPredicted RBP8.16□□□□□ -1.1
CUX1-206ENST00000437600 LHFPL1Q86WI0 220 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 ZNF611Q8N823 705 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 MDS2Q8NDY4 140 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 NANPQ8TBE9 248 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 CPT1CQ8TCG5 803 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 SLAMF9Q96A28 289 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms