RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 NHLRC3Q5JS37 347 aa5.9□□□□□ -1.46
LSM3P3-201ENST00000436601 PLAC9Q5JTB6 97 aa5.9□□□□□ -1.46
LSM3P3-201ENST00000436601 SPANXN2Q5MJ10 180 aa5.9□□□□□ -1.46
LSM3P3-201ENST00000436601 TMEM69Q5SWH9 247 aa5.9□□□□□ -1.46
LSM3P3-201ENST00000436601 RAB12Q6IQ22 244 aa5.9□□□□□ -1.46
LSM3P3-201ENST00000436601 Q8IYB0 196 aa5.9□□□□□ -1.46
LSM3P3-201ENST00000436601 BCL6BQ8N143 479 aaPredicted RBP5.9□□□□□ -1.46
LSM3P3-201ENST00000436601 FAM58AQ8N1B3 248 aa5.9□□□□□ -1.46
LSM3P3-201ENST00000436601 GCSAMQ8N6F7 178 aa5.9□□□□□ -1.46
LSM3P3-201ENST00000436601 STPG3Q8N7X2 389 aa5.9□□□□□ -1.46
LSM3P3-201ENST00000436601 OR10R2Q8NGX6 335 aa5.9□□□□□ -1.46
LSM3P3-201ENST00000436601 OR10Z1Q8NGY1 313 aa5.9□□□□□ -1.46
LSM3P3-201ENST00000436601 ERGIC1Q969X5 290 aa5.9□□□□□ -1.46
LSM3P3-201ENST00000436601 VRK1Q99986 396 aaPredicted RBP5.9□□□□□ -1.46
LSM3P3-201ENST00000436601 NUDT16L1Q9BRJ7 211 aaKnown RBP5.9□□□□□ -1.46
LSM3P3-201ENST00000436601 URM1Q9BTM9 101 aaKnown RBP5.9□□□□□ -1.46
LSM3P3-201ENST00000436601 CACNG6Q9BXT2 260 aa5.9□□□□□ -1.46
LSM3P3-201ENST00000436601 WDR12Q9GZL7 423 aaKnown RBP5.9□□□□□ -1.46
LSM3P3-201ENST00000436601 SRRQ9GZT4 340 aa5.9□□□□□ -1.46
LSM3P3-201ENST00000436601 EGLN1Q9GZT9 426 aa5.9□□□□□ -1.46
LSM3P3-201ENST00000436601 ZMAT3Q9HA38 289 aaKnown RBP5.9□□□□□ -1.46
LSM3P3-201ENST00000436601 SAP30LQ9HAJ7 183 aa5.9□□□□□ -1.46
LSM3P3-201ENST00000436601 DIABLOQ9NR28 239 aa5.9□□□□□ -1.46
LSM3P3-201ENST00000436601 PCDHB16Q9NRJ7 776 aa5.9□□□□□ -1.46
LSM3P3-201ENST00000436601 PPP1R3CQ9UQK1 317 aa5.9□□□□□ -1.46
LSM3P3-201ENST00000436601 ST3GAL6Q9Y274 331 aa5.9□□□□□ -1.46
LSM3P3-201ENST00000436601 MRPS7Q9Y2R9 242 aaKnown RBP5.9□□□□□ -1.46
LSM3P3-201ENST00000436601 KCNK7Q9Y2U2 307 aa5.9□□□□□ -1.46
LSM3P3-201ENST00000436601 ESPL1Q14674 2120 aa5.9□□□□□ -1.47
LSM3P3-201ENST00000436601 MYO7BQ6PIF6 2116 aa5.9□□□□□ -1.47
LSM3P3-201ENST00000436601 HCFC1P51610 2035 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 UBR5O95071 2799 aaPredicted RBP5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 IGHV1-69-2A0A0G2JMI3 117 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 TMEM178BH3BS89 294 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 H3BUI4 141 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 H7C417 338 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 OVOL3O00110 214 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 LY6HO94772 140 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 TPPPO94811 219 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 NXPH2O95156 264 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 CYB5R3P00387 301 aaPredicted RBP5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 TFF1P04155 84 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 GNB3P16520 340 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 PRKACAP17612 351 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 CPT2P23786 658 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 GABRR1P24046 479 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 COL8A2P25067 703 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 PTBP1P26599 531 aaKnown RBP eCLIP5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 CHATP28329 748 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 BLVRBP30043 206 aaPredicted RBP5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 NR4A2P43354 598 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 SNU13P55769 128 aaKnown RBP5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 IFITM3Q01628 133 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 IL18Q14116 193 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 ZNF146Q15072 292 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 FAM189A2Q15884 450 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 BAK1Q16611 211 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 ZNF181Q2M3W8 571 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 ZNF260Q3ZCT1 412 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 CDNFQ49AH0 187 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 PYDC2Q56P42 97 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 FAM201AQ5SY85 155 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 OLFML2AQ68BL7 652 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 PYHIN1Q6K0P9 492 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 Q6P435 159 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 BAIAP2L2Q6UXY1 529 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 ACP7Q6ZNF0 438 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 DNM1P46Q6ZS02 220 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 SNX29P2Q8IUI4 249 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 BOLLQ8N9W6 283 aaKnown RBP5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 CHST4Q8NCG5 386 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 C19orf18Q8NEA5 215 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 OR56B1Q8NGI3 324 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 OR11L1Q8NGX0 322 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 GCDHQ92947 438 aaPredicted RBP5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 EMG1Q92979 244 aaKnown RBP5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 YIPF5Q969M3 257 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 PHF21AQ96BD5 680 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 RAB3CQ96E17 227 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 C14orf79Q96F83 325 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 ARHGAP5-AS1Q96IT6 56 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 PECRQ9BY49 303 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 RAB1BQ9H0U4 201 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 LIME1Q9H400 295 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 AUNIPQ9H7T9 357 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 RASL12Q9NYN1 266 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 RNF7Q9UBF6 113 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 FBXO9Q9UK97 447 aaPredicted RBP5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 ELF5Q9UKW6 265 aaPredicted RBP5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 PLA2G2DQ9UNK4 145 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 CACNA1CQ13936 2221 aa5.89□□□□□ -1.47
LSM3P3-201ENST00000436601 SMG1Q96Q15 3661 aaKnown RBP5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 IGKV1D-17A0A075B6S4 117 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 IGHV3OR15-7A0A075B7D8 119 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 TRAV24A0A0B4J272 114 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 MEIOCA2RUB1 952 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 FAM90A10PA6NDY2 464 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 FAM90A18PA6NE21 464 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 FAM90A16PA6NEW6 464 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 FAM90A20PA6NIJ5 464 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms