RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 KCNJ8Q15842 424 aa13.97□□□□□ -0.17
CALD1-209ENST00000436461 MOGAT2Q3SYC2 334 aa13.97□□□□□ -0.17
CALD1-209ENST00000436461 SIGIRRQ6IA17 410 aa13.97□□□□□ -0.17
CALD1-209ENST00000436461 CIARTQ8N365 385 aaPredicted RBP13.97□□□□□ -0.17
CALD1-209ENST00000436461 DTX3Q8N9I9 347 aa13.97□□□□□ -0.17
CALD1-209ENST00000436461 ASCC1Q8N9N2 400 aaKnown RBP13.97□□□□□ -0.17
CALD1-209ENST00000436461 SLC25A38Q96DW6 304 aa13.97□□□□□ -0.17
CALD1-209ENST00000436461 REG4Q9BYZ8 158 aa13.97□□□□□ -0.17
CALD1-209ENST00000436461 SLIRPQ9GZT3 109 aaKnown RBP13.97□□□□□ -0.17
CALD1-209ENST00000436461 ZNF665Q9H7R5 613 aa13.97□□□□□ -0.17
CALD1-209ENST00000436461 BATF3Q9NR55 127 aa13.97□□□□□ -0.17
CALD1-209ENST00000436461 CCDC59Q9P031 241 aaKnown RBP13.97□□□□□ -0.17
CALD1-209ENST00000436461 SPATA2Q9UM82 520 aa13.97□□□□□ -0.17
CALD1-209ENST00000436461 ITPR3Q14573 2671 aa13.97□□□□□ -0.17
CALD1-209ENST00000436461 SVEP1Q4LDE5 3571 aa13.97□□□□□ -0.17
CALD1-209ENST00000436461 TMEM82A0PJX8 343 aa13.97□□□□□ -0.17
CALD1-209ENST00000436461 NKX6-3A6NJ46 265 aa13.97□□□□□ -0.17
CALD1-209ENST00000436461 SH2D1BO14796 132 aa13.97□□□□□ -0.17
CALD1-209ENST00000436461 DEGS1O15121 323 aa13.97□□□□□ -0.17
CALD1-209ENST00000436461 SOCS1O15524 211 aa13.97□□□□□ -0.17
CALD1-209ENST00000436461 IGHV2-5P01817 119 aa13.97□□□□□ -0.17
CALD1-209ENST00000436461 LMO4P61968 165 aa13.97□□□□□ -0.17
CALD1-209ENST00000436461 NHLRC3Q5JS37 347 aa13.97□□□□□ -0.17
CALD1-209ENST00000436461 ATAD3CQ5T2N8 411 aa13.97□□□□□ -0.17
CALD1-209ENST00000436461 BPIFB2Q8N4F0 458 aa13.97□□□□□ -0.17
CALD1-209ENST00000436461 TMEM185AQ8NFB2 350 aa13.97□□□□□ -0.17
CALD1-209ENST00000436461 MRPS24Q96EL2 167 aaKnown RBP13.97□□□□□ -0.17
CALD1-209ENST00000436461 TM2D1Q9BX74 207 aa13.97□□□□□ -0.17
CALD1-209ENST00000436461 PPA2Q9H2U2 334 aa13.97□□□□□ -0.17
CALD1-209ENST00000436461 PATZ1Q9HBE1 687 aaKnown RBP13.97□□□□□ -0.17
CALD1-209ENST00000436461 ING3Q9NXR8 418 aa13.97□□□□□ -0.17
CALD1-209ENST00000436461 RAB22AQ9UL26 194 aa13.97□□□□□ -0.17
CALD1-209ENST00000436461 TRAV24A0A0B4J272 114 aa13.96□□□□□ -0.17
CALD1-209ENST00000436461 SLC33A1O00400 549 aaPredicted RBP13.96□□□□□ -0.17
CALD1-209ENST00000436461 DVL1O14640 695 aa13.96□□□□□ -0.17
CALD1-209ENST00000436461 SIGLEC5O15389 551 aa13.96□□□□□ -0.17
CALD1-209ENST00000436461 PHF1O43189 567 aaPredicted RBP13.96□□□□□ -0.17
CALD1-209ENST00000436461 HPGDSO60760 199 aa13.96□□□□□ -0.17
CALD1-209ENST00000436461 WNT2P09544 360 aa13.96□□□□□ -0.17
CALD1-209ENST00000436461 USF1P22415 310 aaPredicted RBP13.96□□□□□ -0.17
CALD1-209ENST00000436461 IL13RA1P78552 427 aa13.96□□□□□ -0.17
CALD1-209ENST00000436461 MADCAM1Q13477 382 aa13.96□□□□□ -0.17
CALD1-209ENST00000436461 NKAPLQ5M9Q1 402 aa13.96□□□□□ -0.17
CALD1-209ENST00000436461 ATPAF1Q5TC12 328 aaPredicted RBP13.96□□□□□ -0.17
CALD1-209ENST00000436461 C17orf107Q6ZR85 190 aa13.96□□□□□ -0.17
CALD1-209ENST00000436461 SLC36A1Q7Z2H8 476 aa13.96□□□□□ -0.17
CALD1-209ENST00000436461 SAMD12Q8N8I0 201 aa13.96□□□□□ -0.17
CALD1-209ENST00000436461 SDSLQ96GA7 329 aa13.96□□□□□ -0.17
CALD1-209ENST00000436461 URM1Q9BTM9 101 aaKnown RBP13.96□□□□□ -0.17
CALD1-209ENST00000436461 ATG5Q9H1Y0 275 aa13.96□□□□□ -0.17
CALD1-209ENST00000436461 RHBDL2Q9NX52 303 aa13.96□□□□□ -0.17
CALD1-209ENST00000436461 FBLN5Q9UBX5 448 aa13.96□□□□□ -0.17
CALD1-209ENST00000436461 GLS2Q9UI32 602 aa13.96□□□□□ -0.17
CALD1-209ENST00000436461 TEX15Q9BXT5 2789 aa13.95□□□□□ -0.18
CALD1-209ENST00000436461 FAM157AC9JC47 383 aa13.95□□□□□ -0.18
CALD1-209ENST00000436461 NDUFA2O43678 99 aa13.95□□□□□ -0.18
CALD1-209ENST00000436461 ZNF737O75373 536 aa13.95□□□□□ -0.18
CALD1-209ENST00000436461 CHRM2P08172 466 aa13.95□□□□□ -0.18
CALD1-209ENST00000436461 RAB6AP20340 208 aa13.95□□□□□ -0.18
CALD1-209ENST00000436461 CPT2P23786 658 aa13.95□□□□□ -0.18
CALD1-209ENST00000436461 MPV17LQ2QL34 196 aa13.95□□□□□ -0.18
CALD1-209ENST00000436461 ZNF841Q6ZN19 808 aa13.95□□□□□ -0.18
CALD1-209ENST00000436461 OR4S1Q8NGB4 309 aa13.95□□□□□ -0.18
CALD1-209ENST00000436461 OR8B3Q8NGG8 313 aa13.95□□□□□ -0.18
CALD1-209ENST00000436461 AP3S1Q92572 193 aa13.95□□□□□ -0.18
CALD1-209ENST00000436461 DYRK2Q92630 601 aa13.95□□□□□ -0.18
CALD1-209ENST00000436461 KCTD12Q96CX2 325 aaKnown RBP13.95□□□□□ -0.18
CALD1-209ENST00000436461 NEIL1Q96FI4 390 aaPredicted RBP13.95□□□□□ -0.18
CALD1-209ENST00000436461 OR8B2Q96RD0 313 aa13.95□□□□□ -0.18
CALD1-209ENST00000436461 SHARPINQ9H0F6 387 aa13.95□□□□□ -0.18
CALD1-209ENST00000436461 LPAR2Q9HBW0 351 aa13.95□□□□□ -0.18
CALD1-209ENST00000436461 MIOXQ9UGB7 285 aa13.95□□□□□ -0.18
CALD1-209ENST00000436461 ETV7Q9Y603 341 aa13.95□□□□□ -0.18
CALD1-209ENST00000436461 MALRD1Q5VYJ5 2156 aa13.95□□□□□ -0.18
CALD1-209ENST00000436461 MEX3AA1L020 520 aaKnown RBP13.94□□□□□ -0.18
CALD1-209ENST00000436461 F5H0A9 414 aaPredicted RBP13.94□□□□□ -0.18
CALD1-209ENST00000436461 CTDSP2O14595 271 aa13.94□□□□□ -0.18
CALD1-209ENST00000436461 SMAD7O15105 426 aaKnown RBP13.94□□□□□ -0.18
CALD1-209ENST00000436461 EIF4EP06730 217 aaKnown RBP13.94□□□□□ -0.18
CALD1-209ENST00000436461 BLVRBP30043 206 aaPredicted RBP13.94□□□□□ -0.18
CALD1-209ENST00000436461 ATXN7L3Q14CW9 347 aaPredicted RBP13.94□□□□□ -0.18
CALD1-209ENST00000436461 CNPY1Q3B7I2 92 aa13.94□□□□□ -0.18
CALD1-209ENST00000436461 C6orf201Q7Z4U5 140 aa13.94□□□□□ -0.18
CALD1-209ENST00000436461 CMTM4Q8IZR5 234 aa13.94□□□□□ -0.18
CALD1-209ENST00000436461 ZNF561Q8N587 486 aa13.94□□□□□ -0.18
CALD1-209ENST00000436461 TPRX1Q8N7U7 411 aa13.94□□□□□ -0.18
CALD1-209ENST00000436461 SUMF2Q8NBJ7 301 aa13.94□□□□□ -0.18
CALD1-209ENST00000436461 ST8SIA4Q92187 359 aa13.94□□□□□ -0.18
CALD1-209ENST00000436461 C6orf62Q9GZU0 229 aaPredicted RBP13.94□□□□□ -0.18
CALD1-209ENST00000436461 DNTTIP1Q9H147 329 aa13.94□□□□□ -0.18
CALD1-209ENST00000436461 ZMAT3Q9HA38 289 aaKnown RBP13.94□□□□□ -0.18
CALD1-209ENST00000436461 KAAG1Q9UBP8 84 aa13.94□□□□□ -0.18
CALD1-209ENST00000436461 SLC25A10Q9UBX3 287 aaPredicted RBP13.94□□□□□ -0.18
CALD1-209ENST00000436461 A0A075B6Q4 140 aa13.93□□□□□ -0.18
CALD1-209ENST00000436461 H7C1Q1 480 aa13.93□□□□□ -0.18
CALD1-209ENST00000436461 TK1P04183 234 aa13.93□□□□□ -0.18
CALD1-209ENST00000436461 NDUFB7P17568 137 aa13.93□□□□□ -0.18
CALD1-209ENST00000436461 LMO1P25800 156 aa13.93□□□□□ -0.18
CALD1-209ENST00000436461 OR3A1P47881 315 aa13.93□□□□□ -0.18
CALD1-209ENST00000436461 PITPNBP48739 271 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms