RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 ZNF503-AS2A6NEH8 195 aa13.51□□□□□ -0.25
SCARF1-203ENST00000434376 H0YIZ8 118 aa13.51□□□□□ -0.25
SCARF1-203ENST00000434376 PRH1P02810 166 aa13.51□□□□□ -0.25
SCARF1-203ENST00000434376 SLC25A4P12235 298 aa13.51□□□□□ -0.25
SCARF1-203ENST00000434376 LPAR6P43657 344 aa13.51□□□□□ -0.25
SCARF1-203ENST00000434376 QRFPP83859 136 aa13.51□□□□□ -0.25
SCARF1-203ENST00000434376 TMEM251Q8N6I4 163 aa13.51□□□□□ -0.25
SCARF1-203ENST00000434376 MITD1Q8WV92 249 aa13.51□□□□□ -0.25
SCARF1-203ENST00000434376 OR10C1Q96KK4 312 aa13.51□□□□□ -0.25
SCARF1-203ENST00000434376 RGCCQ9H4X1 137 aa13.51□□□□□ -0.25
SCARF1-203ENST00000434376 GPR35Q9HC97 309 aa13.51□□□□□ -0.25
SCARF1-203ENST00000434376 BOKQ9UMX3 212 aaPredicted RBP13.51□□□□□ -0.25
SCARF1-203ENST00000434376 KLF2Q9Y5W3 355 aaPredicted RBP13.51□□□□□ -0.25
SCARF1-203ENST00000434376 A0A1W2PPH5 198 aa13.5□□□□□ -0.25
SCARF1-203ENST00000434376 GJE1A6NN92 205 aa13.5□□□□□ -0.25
SCARF1-203ENST00000434376 NEURL1O76050 574 aa13.5□□□□□ -0.25
SCARF1-203ENST00000434376 LY86O95711 162 aa13.5□□□□□ -0.25
SCARF1-203ENST00000434376 RBP2P50120 134 aa13.5□□□□□ -0.25
SCARF1-203ENST00000434376 ABCA11PQ4W5N1 156 aa13.5□□□□□ -0.25
SCARF1-203ENST00000434376 PLPPR2Q96GM1 343 aa13.5□□□□□ -0.25
SCARF1-203ENST00000434376 TAF9BQ9HBM6 251 aa13.5□□□□□ -0.25
SCARF1-203ENST00000434376 MMP26Q9NRE1 261 aa13.5□□□□□ -0.25
SCARF1-203ENST00000434376 AK3Q9UIJ7 227 aa13.5□□□□□ -0.25
SCARF1-203ENST00000434376 AMDHD2Q9Y303 409 aa13.5□□□□□ -0.25
SCARF1-203ENST00000434376 TDGF1P13385 188 aa13.5□□□□□ -0.25
SCARF1-203ENST00000434376 B3GALT5-AS1P59052 145 aa13.5□□□□□ -0.25
SCARF1-203ENST00000434376 RAB1AP62820 205 aa13.5□□□□□ -0.25
SCARF1-203ENST00000434376 Q6ZRG5 221 aa13.5□□□□□ -0.25
SCARF1-203ENST00000434376 NUFIP2Q7Z417 695 aaKnown RBP13.5□□□□□ -0.25
SCARF1-203ENST00000434376 FAM24BQ8N5W8 94 aa13.5□□□□□ -0.25
SCARF1-203ENST00000434376 WNT5BQ9H1J7 359 aa13.5□□□□□ -0.25
SCARF1-203ENST00000434376 IGKV1-12A0A0C4DH73 117 aa13.49□□□□□ -0.25
SCARF1-203ENST00000434376 LILRA1O75019 489 aa13.49□□□□□ -0.25
SCARF1-203ENST00000434376 IGKV1D-12P01611 117 aa13.49□□□□□ -0.25
SCARF1-203ENST00000434376 OR5H8P0DN80 308 aa13.49□□□□□ -0.25
SCARF1-203ENST00000434376 OMGP23515 440 aa13.49□□□□□ -0.25
SCARF1-203ENST00000434376 PTAFRP25105 342 aa13.49□□□□□ -0.25
SCARF1-203ENST00000434376 GSK3AP49840 483 aa13.49□□□□□ -0.25
SCARF1-203ENST00000434376 HABP2Q14520 560 aaPredicted RBP13.49□□□□□ -0.25
SCARF1-203ENST00000434376 ZNF239Q16600 458 aaKnown RBP13.49□□□□□ -0.25
SCARF1-203ENST00000434376 MRPL21Q7Z2W9 205 aaKnown RBP13.49□□□□□ -0.25
SCARF1-203ENST00000434376 TTTY12Q9BZ98 90 aa13.49□□□□□ -0.25
SCARF1-203ENST00000434376 SLC17A5Q9NRA2 495 aa13.49□□□□□ -0.25
SCARF1-203ENST00000434376 SMCO4Q9NRQ5 59 aa13.49□□□□□ -0.25
SCARF1-203ENST00000434376 CACNA1BQ00975 2339 aa13.49□□□□□ -0.25
SCARF1-203ENST00000434376 ZNF318Q5VUA4 2279 aa13.49□□□□□ -0.25
SCARF1-203ENST00000434376 ZNF716A6NP11 495 aa13.49□□□□□ -0.25
SCARF1-203ENST00000434376 C9JQL5 133 aa13.49□□□□□ -0.25
SCARF1-203ENST00000434376 CDX4O14627 284 aaPredicted RBP13.49□□□□□ -0.25
SCARF1-203ENST00000434376 LYZL6O75951 148 aa13.49□□□□□ -0.25
SCARF1-203ENST00000434376 TFF1P04155 84 aa13.49□□□□□ -0.25
SCARF1-203ENST00000434376 CHRM2P08172 466 aa13.49□□□□□ -0.25
SCARF1-203ENST00000434376 OR2T2Q6IF00 324 aa13.49□□□□□ -0.25
SCARF1-203ENST00000434376 IP6K3Q96PC2 410 aa13.49□□□□□ -0.25
SCARF1-203ENST00000434376 OR2H1Q9GZK4 316 aa13.49□□□□□ -0.25
SCARF1-203ENST00000434376 METTL9Q9H1A3 318 aa13.49□□□□□ -0.25
SCARF1-203ENST00000434376 LPAR3Q9UBY5 353 aa13.49□□□□□ -0.25
SCARF1-203ENST00000434376 SLC7A11Q9UPY5 501 aa13.49□□□□□ -0.25
SCARF1-203ENST00000434376 C14orf166Q9Y224 244 aaKnown RBP13.49□□□□□ -0.25
SCARF1-203ENST00000434376 A0A087WZY1 265 aa13.49□□□□□ -0.25
SCARF1-203ENST00000434376 IGLV3-32A0A0A0MS00 114 aa13.49□□□□□ -0.25
SCARF1-203ENST00000434376 MEOX1P50221 254 aa13.49□□□□□ -0.25
SCARF1-203ENST00000434376 IDH3GP51553 393 aaPredicted RBP13.49□□□□□ -0.25
SCARF1-203ENST00000434376 TRA2AQ13595 282 aaKnown RBP eCLIP13.49□□□□□ -0.25
SCARF1-203ENST00000434376 IAH1Q2TAA2 248 aaPredicted RBP13.49□□□□□ -0.25
SCARF1-203ENST00000434376 P4HA3Q7Z4N8 544 aa13.49□□□□□ -0.25
SCARF1-203ENST00000434376 ZNF611Q8N823 705 aa13.49□□□□□ -0.25
SCARF1-203ENST00000434376 SEC11CQ9BY50 192 aa13.49□□□□□ -0.25
SCARF1-203ENST00000434376 CHST5Q9GZS9 411 aa13.49□□□□□ -0.25
SCARF1-203ENST00000434376 TIMM10BQ9Y5J6 103 aa13.49□□□□□ -0.25
SCARF1-203ENST00000434376 USF3Q68DE3 2245 aa13.48□□□□□ -0.25
SCARF1-203ENST00000434376 YKT6O15498 198 aa13.48□□□□□ -0.25
SCARF1-203ENST00000434376 IFNA4P05014 189 aa13.48□□□□□ -0.25
SCARF1-203ENST00000434376 OR8U9P0C7N5 309 aa13.48□□□□□ -0.25
SCARF1-203ENST00000434376 NR2C1P13056 603 aa13.48□□□□□ -0.25
SCARF1-203ENST00000434376 FCGR2CP31995 323 aa13.48□□□□□ -0.25
SCARF1-203ENST00000434376 LSM6P62312 80 aaKnown RBP13.48□□□□□ -0.25
SCARF1-203ENST00000434376 PDZD11Q5EBL8 140 aa13.48□□□□□ -0.25
SCARF1-203ENST00000434376 FAM27BQ5VT28 67 aa13.48□□□□□ -0.25
SCARF1-203ENST00000434376 OR8U1Q8NH10 309 aa13.48□□□□□ -0.25
SCARF1-203ENST00000434376 OR6S1Q8NH40 331 aa13.48□□□□□ -0.25
SCARF1-203ENST00000434376 MARS2Q96GW9 593 aaKnown RBP13.48□□□□□ -0.25
SCARF1-203ENST00000434376 RCC2Q9P258 522 aaKnown RBP13.48□□□□□ -0.25
SCARF1-203ENST00000434376 STARD10Q9Y365 291 aa13.48□□□□□ -0.25
SCARF1-203ENST00000434376 LOC390937A0A1W2PQ73 354 aa13.48□□□□□ -0.25
SCARF1-203ENST00000434376 CD74P04233 296 aa13.48□□□□□ -0.25
SCARF1-203ENST00000434376 ZNF16P17020 682 aaPredicted RBP13.48□□□□□ -0.25
SCARF1-203ENST00000434376 RNF126Q9BV68 326 aa13.48□□□□□ -0.25
SCARF1-203ENST00000434376 SLCO5A1Q9H2Y9 848 aa13.48□□□□□ -0.25
SCARF1-203ENST00000434376 MOB1AQ9H8S9 216 aa13.48□□□□□ -0.25
SCARF1-203ENST00000434376 SPACA1Q9HBV2 294 aa13.48□□□□□ -0.25
SCARF1-203ENST00000434376 RBM7Q9Y580 266 aaKnown RBP13.48□□□□□ -0.25
SCARF1-203ENST00000434376 TSPAN15O95858 294 aa13.47□□□□□ -0.25
SCARF1-203ENST00000434376 OR13C7P0DN81 318 aa13.47□□□□□ -0.25
SCARF1-203ENST00000434376 CD59P13987 128 aa13.47□□□□□ -0.25
SCARF1-203ENST00000434376 HIST3H3Q16695 136 aa13.47□□□□□ -0.25
SCARF1-203ENST00000434376 OR2A2Q6IF42 318 aa13.47□□□□□ -0.25
SCARF1-203ENST00000434376 DHRS11Q6UWP2 260 aa13.47□□□□□ -0.25
SCARF1-203ENST00000434376 HAS2Q92819 552 aa13.47□□□□□ -0.25
SCARF1-203ENST00000434376 FOXD3Q9UJU5 478 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms