RNA–Protein interactions for RNA: ENST00000432945.1

HMGN1P33-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 33, humanhuman

BASIC

Gene HMGN1P33, Length 451 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P33-201ENST00000432945 TUBA4BQ9H853 241 aa0.13□□□□□ -2.39
HMGN1P33-201ENST00000432945 LINC00574Q9H8X3 128 aa0.13□□□□□ -2.39
HMGN1P33-201ENST00000432945 MEAF6Q9HAF1 191 aa0.13□□□□□ -2.39
HMGN1P33-201ENST00000432945 SDAD1Q9NVU7 687 aaKnown RBP eCLIP0.13□□□□□ -2.39
HMGN1P33-201ENST00000432945 CLN8Q9UBY8 286 aa0.13□□□□□ -2.39
HMGN1P33-201ENST00000432945 MFHAS1Q9Y4C4 1052 aa0.13□□□□□ -2.39
HMGN1P33-201ENST00000432945 DDX49Q9Y6V7 483 aaKnown RBP0.13□□□□□ -2.39
HMGN1P33-201ENST00000432945 A0A0J9YXV3 536 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 ZNF860A6NHJ4 632 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 PCP4L1A6NKN8 68 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 G3V3Q6 166 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 K7EMT4 169 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 LANCL1O43813 399 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 KCNK2O95069 426 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 NRASP01111 189 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 HRASP01112 189 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 KRASP01116 189 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 IGHG2P01859 326 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 MT-ND4P03905 459 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 OTX1P32242 354 aaPredicted RBP0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 G6PCP35575 357 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 GRIA1P42261 906 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 MAGEA6P43360 314 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 CDH6P55285 790 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 FOXA1P55317 472 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 CBX1P83916 185 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 MXD1Q05195 221 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 TRDNQ13061 729 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 SLC25A35Q3KQZ1 300 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 ALKBH6Q3KRA9 238 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 TTC23Q5W5X9 447 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 FAM104BQ5XKR9 115 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 SPECC1LQ69YQ0 1117 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 CLEC2AQ6UVW9 174 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 TMPRSS11AQ6ZMR5 421 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 EFL1Q7Z2Z2 1120 aaKnown RBP0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 EIF4E3Q8N5X7 224 aaKnown RBP0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 LINC00469Q8N7U9 141 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 SIGLECL1Q8N7X8 197 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 ANKFN1Q8N957 763 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 C15orf53Q8NAA6 179 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 UBAC2Q8NBM4 344 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 CHST4Q8NCG5 386 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 OR4C13Q8NGP0 309 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 OR2A1Q8NGT9 310 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 OR1L1Q8NH94 360 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 RNASE11Q8TAA1 199 aaKnown RBP0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 ZNF420Q8TAQ5 688 aaPredicted RBP0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 CCDC110Q8TBZ0 833 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 ENKURQ8TC29 256 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 CPNE4Q96A23 557 aaPredicted RBP0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 CCDC47Q96A33 483 aaKnown RBP0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 TMEM230Q96A57 120 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 CNN2Q99439 309 aaKnown RBP0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 TXNDC17Q9BRA2 123 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 DSN1Q9H410 356 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 TMEM27Q9HBJ8 222 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 NMRAL1Q9HBL8 299 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 MED4Q9NPJ6 270 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 PRSS16Q9NQE7 514 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 FAM206AQ9NX38 181 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 RWDD2AQ9UIY3 292 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 ING4Q9UNL4 249 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 PIGLQ9Y2B2 252 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 KNSTRNQ9Y448 316 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 TRAPPC1Q9Y5R8 145 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 MYH3P11055 1940 aa0.12□□□□□ -2.39
HMGN1P33-201ENST00000432945 IGHV1-69DA0A0B4J2H0 117 aa0.11□□□□□ -2.39
HMGN1P33-201ENST00000432945 ZNF816-ZNF321PA0A0X1KG74 233 aa0.11□□□□□ -2.39
HMGN1P33-201ENST00000432945 A0A1W2PNM2 257 aa0.11□□□□□ -2.39
HMGN1P33-201ENST00000432945 ISPDA4D126 451 aa0.11□□□□□ -2.39
HMGN1P33-201ENST00000432945 PDZK1P1A8MUH7 402 aa0.11□□□□□ -2.39
HMGN1P33-201ENST00000432945 C9JVG2 144 aa0.11□□□□□ -2.39
HMGN1P33-201ENST00000432945 GOSR2O14653 212 aa0.11□□□□□ -2.39
HMGN1P33-201ENST00000432945 CCL16O15467 120 aa0.11□□□□□ -2.39
HMGN1P33-201ENST00000432945 TSPAN12O95859 305 aa0.11□□□□□ -2.39
HMGN1P33-201ENST00000432945 IGHV3-53P01767 116 aa0.11□□□□□ -2.39
HMGN1P33-201ENST00000432945 KRT8P05787 483 aa0.11□□□□□ -2.39
HMGN1P33-201ENST00000432945 GPX1P07203 203 aa0.11□□□□□ -2.39
HMGN1P33-201ENST00000432945 CD28P10747 220 aa0.11□□□□□ -2.39
HMGN1P33-201ENST00000432945 CCL4P13236 92 aa0.11□□□□□ -2.39
HMGN1P33-201ENST00000432945 STMN1P16949 149 aa0.11□□□□□ -2.39
HMGN1P33-201ENST00000432945 NELFEP18615 380 aaKnown RBP0.11□□□□□ -2.39
HMGN1P33-201ENST00000432945 PRPS1L1P21108 318 aa0.11□□□□□ -2.39
HMGN1P33-201ENST00000432945 U2AF2P26368 475 aaKnown RBP eCLIP0.11□□□□□ -2.39
HMGN1P33-201ENST00000432945 FOXN2P32314 431 aa0.11□□□□□ -2.39
HMGN1P33-201ENST00000432945 ERFP50548 548 aa0.11□□□□□ -2.39
HMGN1P33-201ENST00000432945 NUDT2P50583 147 aa0.11□□□□□ -2.39
HMGN1P33-201ENST00000432945 ZNF140P52738 457 aaPredicted RBP0.11□□□□□ -2.39
HMGN1P33-201ENST00000432945 OR12D2P58182 307 aa0.11□□□□□ -2.39
HMGN1P33-201ENST00000432945 IFITM3Q01628 133 aa0.11□□□□□ -2.39
HMGN1P33-201ENST00000432945 TGM3Q08188 693 aa0.11□□□□□ -2.39
HMGN1P33-201ENST00000432945 AP1B1Q10567 949 aa0.11□□□□□ -2.39
HMGN1P33-201ENST00000432945 FOXF1Q12946 379 aa0.11□□□□□ -2.39
HMGN1P33-201ENST00000432945 OR7A5Q15622 319 aa0.11□□□□□ -2.39
HMGN1P33-201ENST00000432945 EXOC3L2Q2M3D2 409 aa0.11□□□□□ -2.39
HMGN1P33-201ENST00000432945 FBXL19-AS1Q494R0 122 aa0.11□□□□□ -2.39
HMGN1P33-201ENST00000432945 SLC36A3Q495N2 470 aa0.11□□□□□ -2.39
HMGN1P33-201ENST00000432945 LUZP6Q538Z0 58 aa0.11□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms