RNA–Protein interactions for RNA: ENST00000430454.5

HDAC9-211, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-211ENST00000430454 BATF2Q8N1L9 274 aa7.42□□□□□ -1.22
HDAC9-211ENST00000430454 PQLC1Q8N2U9 271 aa7.42□□□□□ -1.22
HDAC9-211ENST00000430454 RHOXF1Q8NHV9 184 aa7.42□□□□□ -1.22
HDAC9-211ENST00000430454 ZNF596Q8TC21 504 aa7.42□□□□□ -1.22
HDAC9-211ENST00000430454 TAF15Q92804 592 aaKnown RBP eCLIP7.42□□□□□ -1.22
HDAC9-211ENST00000430454 PELI1Q96FA3 418 aa7.42□□□□□ -1.22
HDAC9-211ENST00000430454 AKR1E2Q96JD6 320 aa7.42□□□□□ -1.22
HDAC9-211ENST00000430454 HMG20AQ9NP66 347 aa7.42□□□□□ -1.22
HDAC9-211ENST00000430454 RBFOX1Q9NWB1 397 aaKnown RBP7.42□□□□□ -1.22
HDAC9-211ENST00000430454 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.42□□□□□ -1.22
HDAC9-211ENST00000430454 IGKV1-27A0A075B6S5 117 aa7.41□□□□□ -1.22
HDAC9-211ENST00000430454 FAM90A8PA6NJQ4 464 aa7.41□□□□□ -1.22
HDAC9-211ENST00000430454 OR4C45A6NMZ5 311 aa7.41□□□□□ -1.22
HDAC9-211ENST00000430454 TOR1AO14656 332 aa7.41□□□□□ -1.22
HDAC9-211ENST00000430454 DEGS1O15121 323 aa7.41□□□□□ -1.22
HDAC9-211ENST00000430454 SULT1B1O43704 296 aa7.41□□□□□ -1.22
HDAC9-211ENST00000430454 KDM4BO94953 1096 aa7.41□□□□□ -1.22
HDAC9-211ENST00000430454 IGHA1P01876 353 aa7.41□□□□□ -1.22
HDAC9-211ENST00000430454 CSF1P09603 554 aa7.41□□□□□ -1.22
HDAC9-211ENST00000430454 ZNF44P15621 663 aa7.41□□□□□ -1.22
HDAC9-211ENST00000430454 HTR1DP28221 377 aa7.41□□□□□ -1.22
HDAC9-211ENST00000430454 CEACAM3P40198 252 aa7.41□□□□□ -1.22
HDAC9-211ENST00000430454 MTNR1BP49286 362 aa7.41□□□□□ -1.22
HDAC9-211ENST00000430454 DYNLT3P51808 116 aa7.41□□□□□ -1.22
HDAC9-211ENST00000430454 PRRX1P54821 245 aa7.41□□□□□ -1.22
HDAC9-211ENST00000430454 DLX1P56177 255 aa7.41□□□□□ -1.22
HDAC9-211ENST00000430454 DLX6P56179 175 aa7.41□□□□□ -1.22
HDAC9-211ENST00000430454 NANOS3P60323 173 aaKnown RBP7.41□□□□□ -1.22
HDAC9-211ENST00000430454 PPP3R1P63098 170 aa7.41□□□□□ -1.22
HDAC9-211ENST00000430454 SCN1BQ07699 218 aa7.41□□□□□ -1.22
HDAC9-211ENST00000430454 TTC23Q5W5X9 447 aa7.41□□□□□ -1.22
HDAC9-211ENST00000430454 ZNF626Q68DY1 528 aa7.41□□□□□ -1.22
HDAC9-211ENST00000430454 ZNF565Q8N9K5 539 aa7.41□□□□□ -1.22
HDAC9-211ENST00000430454 SETD9Q8NE22 299 aa7.41□□□□□ -1.22
HDAC9-211ENST00000430454 OR4D6Q8NGJ1 314 aa7.41□□□□□ -1.22
HDAC9-211ENST00000430454 OR13C9Q8NGT0 318 aa7.41□□□□□ -1.22
HDAC9-211ENST00000430454 NDNFQ8TB73 568 aa7.41□□□□□ -1.22
HDAC9-211ENST00000430454 AJUBAQ96IF1 538 aa7.41□□□□□ -1.22
HDAC9-211ENST00000430454 GPER1Q99527 375 aa7.41□□□□□ -1.22
HDAC9-211ENST00000430454 S100A13Q99584 98 aa7.41□□□□□ -1.22
HDAC9-211ENST00000430454 CLEC7AQ9BXN2 247 aa7.41□□□□□ -1.22
HDAC9-211ENST00000430454 PRSS22Q9GZN4 317 aa7.41□□□□□ -1.22
HDAC9-211ENST00000430454 TMEM133Q9H2Q1 129 aa7.41□□□□□ -1.22
HDAC9-211ENST00000430454 MRPS18AQ9NVS2 196 aaKnown RBP7.41□□□□□ -1.22
HDAC9-211ENST00000430454 FAM118AQ9NWS6 357 aa7.41□□□□□ -1.22
HDAC9-211ENST00000430454 PAK1IP1Q9NWT1 392 aaPredicted RBP7.41□□□□□ -1.22
HDAC9-211ENST00000430454 ERVK13-1Q9NX77 482 aa7.41□□□□□ -1.22
HDAC9-211ENST00000430454 SMPD3Q9NY59 655 aaPredicted RBP7.41□□□□□ -1.22
HDAC9-211ENST00000430454 TAS2R3Q9NYW6 316 aa7.41□□□□□ -1.22
HDAC9-211ENST00000430454 OR6C3Q9NZP0 311 aa7.41□□□□□ -1.22
HDAC9-211ENST00000430454 GSTK1Q9Y2Q3 226 aa7.41□□□□□ -1.22
HDAC9-211ENST00000430454 IGKV1-9A0A0C4DH69 117 aa7.4□□□□□ -1.22
HDAC9-211ENST00000430454 TMEM82A0PJX8 343 aa7.4□□□□□ -1.22
HDAC9-211ENST00000430454 ODF3BA8MYP8 253 aa7.4□□□□□ -1.22
HDAC9-211ENST00000430454 F8VVB4 439 aa7.4□□□□□ -1.22
HDAC9-211ENST00000430454 F8VWA3 439 aa7.4□□□□□ -1.22
HDAC9-211ENST00000430454 SIRPB1O00241 398 aa7.4□□□□□ -1.22
HDAC9-211ENST00000430454 BPNT1O95861 308 aa7.4□□□□□ -1.22
HDAC9-211ENST00000430454 OR2H2O95918 312 aa7.4□□□□□ -1.22
HDAC9-211ENST00000430454 CSN2P05814 226 aa7.4□□□□□ -1.22
HDAC9-211ENST00000430454 LMO1P25800 156 aa7.4□□□□□ -1.22
HDAC9-211ENST00000430454 DCKP27707 260 aa7.4□□□□□ -1.22
HDAC9-211ENST00000430454 DUSP1P28562 367 aa7.4□□□□□ -1.22
HDAC9-211ENST00000430454 PTGFRP43088 359 aa7.4□□□□□ -1.22
HDAC9-211ENST00000430454 NPBWR2P48146 333 aa7.4□□□□□ -1.22
HDAC9-211ENST00000430454 KCNJ3P48549 501 aa7.4□□□□□ -1.22
HDAC9-211ENST00000430454 SNU13P55769 128 aaKnown RBP7.4□□□□□ -1.22
HDAC9-211ENST00000430454 EMX1Q04741 257 aaPredicted RBP7.4□□□□□ -1.22
HDAC9-211ENST00000430454 SLC34A1Q06495 639 aa7.4□□□□□ -1.22
HDAC9-211ENST00000430454 KISS1Q15726 138 aa7.4□□□□□ -1.22
HDAC9-211ENST00000430454 SSX2Q16385 188 aa7.4□□□□□ -1.22
HDAC9-211ENST00000430454 ASPHD2Q6ICH7 369 aa7.4□□□□□ -1.22
HDAC9-211ENST00000430454 CCDC144NLQ6NUI1 221 aa7.4□□□□□ -1.22
HDAC9-211ENST00000430454 RPL22L1Q6P5R6 122 aaKnown RBP7.4□□□□□ -1.22
HDAC9-211ENST00000430454 C16orf82Q7Z2V1 217 aa7.4□□□□□ -1.22
HDAC9-211ENST00000430454 C11orf42Q8N5U0 333 aa7.4□□□□□ -1.22
HDAC9-211ENST00000430454 PARP16Q8N5Y8 322 aa7.4□□□□□ -1.22
HDAC9-211ENST00000430454 PACRGLQ8N7B6 248 aa7.4□□□□□ -1.22
HDAC9-211ENST00000430454 OR52I1Q8NGK6 324 aa7.4□□□□□ -1.22
HDAC9-211ENST00000430454 GPR148Q8TDV2 347 aa7.4□□□□□ -1.22
HDAC9-211ENST00000430454 CORO2AQ92828 525 aa7.4□□□□□ -1.22
HDAC9-211ENST00000430454 NKX3-1Q99801 234 aaPredicted RBP7.4□□□□□ -1.22
HDAC9-211ENST00000430454 JAM3Q9BX67 310 aa7.4□□□□□ -1.22
HDAC9-211ENST00000430454 BARHL1Q9BZE3 327 aa7.4□□□□□ -1.22
HDAC9-211ENST00000430454 CHST6Q9GZX3 395 aa7.4□□□□□ -1.22
HDAC9-211ENST00000430454 CKLFQ9UBR5 152 aa7.4□□□□□ -1.22
HDAC9-211ENST00000430454 TCF19Q9Y242 345 aa7.4□□□□□ -1.22
HDAC9-211ENST00000430454 BOLA1Q9Y3E2 137 aa7.4□□□□□ -1.22
HDAC9-211ENST00000430454 IGHV2-26A0A0B4J1V2 119 aa7.39□□□□□ -1.23
HDAC9-211ENST00000430454 ODAMA1E959 279 aa7.39□□□□□ -1.23
HDAC9-211ENST00000430454 LEUTXA8MZ59 168 aa7.39□□□□□ -1.23
HDAC9-211ENST00000430454 E9PQ18 207 aa7.39□□□□□ -1.23
HDAC9-211ENST00000430454 ZNF780AO75290 641 aaPredicted RBP7.39□□□□□ -1.23
HDAC9-211ENST00000430454 ZFPL1O95159 310 aa7.39□□□□□ -1.23
HDAC9-211ENST00000430454 GABRB1P18505 474 aa7.39□□□□□ -1.23
HDAC9-211ENST00000430454 C21orf33P30042 268 aaPredicted RBP7.39□□□□□ -1.23
HDAC9-211ENST00000430454 MNDAP41218 407 aa7.39□□□□□ -1.23
HDAC9-211ENST00000430454 OR3A1P47881 315 aa7.39□□□□□ -1.23
HDAC9-211ENST00000430454 EFNB2P52799 333 aa7.39□□□□□ -1.23
HDAC9-211ENST00000430454 SRSF4Q08170 494 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 603.3 ms