RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 RPUSD1Q9UJJ7 312 aaKnown RBP13.95□□□□□ -0.18
UBE3D-204ENST00000430071 STUB1Q9UNE7 303 aa13.95□□□□□ -0.18
UBE3D-204ENST00000430071 SHISA3A0PJX4 238 aa13.94□□□□□ -0.18
UBE3D-204ENST00000430071 HOXA3O43365 443 aaPredicted RBP13.94□□□□□ -0.18
UBE3D-204ENST00000430071 CYB5AP00167 134 aa13.94□□□□□ -0.18
UBE3D-204ENST00000430071 CALCBP10092 127 aa13.94□□□□□ -0.18
UBE3D-204ENST00000430071 PTGFRP43088 359 aa13.94□□□□□ -0.18
UBE3D-204ENST00000430071 IKZF1Q13422 519 aa13.94□□□□□ -0.18
UBE3D-204ENST00000430071 CD276Q5ZPR3 534 aa13.94□□□□□ -0.18
UBE3D-204ENST00000430071 C22orf42Q6IC83 251 aa13.94□□□□□ -0.18
UBE3D-204ENST00000430071 JAGN1Q8N5M9 183 aa13.94□□□□□ -0.18
UBE3D-204ENST00000430071 ZSCAN4Q8NAM6 433 aaPredicted RBP13.94□□□□□ -0.18
UBE3D-204ENST00000430071 ANGPTL6Q8NI99 470 aa13.94□□□□□ -0.18
UBE3D-204ENST00000430071 LHX4Q969G2 390 aa13.94□□□□□ -0.18
UBE3D-204ENST00000430071 C12orf43Q96C57 262 aaKnown RBP13.94□□□□□ -0.18
UBE3D-204ENST00000430071 YIPF6Q96EC8 236 aa13.94□□□□□ -0.18
UBE3D-204ENST00000430071 GFI1Q99684 422 aa13.94□□□□□ -0.18
UBE3D-204ENST00000430071 MRPS26Q9BYN8 205 aaKnown RBP13.94□□□□□ -0.18
UBE3D-204ENST00000430071 RBFOX1Q9NWB1 397 aaKnown RBP13.94□□□□□ -0.18
UBE3D-204ENST00000430071 TXNL4BQ9NX01 149 aaKnown RBP13.94□□□□□ -0.18
UBE3D-204ENST00000430071 IL36RNQ9UBH0 155 aa13.94□□□□□ -0.18
UBE3D-204ENST00000430071 ZNF222Q9UK12 451 aa13.94□□□□□ -0.18
UBE3D-204ENST00000430071 IGKV1D-17A0A075B6S4 117 aa13.93□□□□□ -0.18
UBE3D-204ENST00000430071 MEGF11A6BM72 1044 aa13.93□□□□□ -0.18
UBE3D-204ENST00000430071 OR2AT4A6NND4 320 aa13.93□□□□□ -0.18
UBE3D-204ENST00000430071 KDM4BO94953 1096 aa13.93□□□□□ -0.18
UBE3D-204ENST00000430071 TFAP2AP05549 437 aa13.93□□□□□ -0.18
UBE3D-204ENST00000430071 RNASE1P07998 156 aaKnown RBP13.93□□□□□ -0.18
UBE3D-204ENST00000430071 PSG2P11465 335 aa13.93□□□□□ -0.18
UBE3D-204ENST00000430071 OMGP23515 440 aa13.93□□□□□ -0.18
UBE3D-204ENST00000430071 FGF9P31371 208 aaPredicted RBP13.93□□□□□ -0.18
UBE3D-204ENST00000430071 SMIM21Q3B7S5 101 aa13.93□□□□□ -0.18
UBE3D-204ENST00000430071 GPR157Q5UAW9 335 aa13.93□□□□□ -0.18
UBE3D-204ENST00000430071 ASCL4Q6XD76 172 aa13.93□□□□□ -0.18
UBE3D-204ENST00000430071 CDH26Q8IXH8 852 aa13.93□□□□□ -0.18
UBE3D-204ENST00000430071 NKAIN3Q8N8D7 197 aa13.93□□□□□ -0.18
UBE3D-204ENST00000430071 GAFA1Q96PS6 74 aa13.93□□□□□ -0.18
UBE3D-204ENST00000430071 FAM192AQ9GZU8 254 aa13.93□□□□□ -0.18
UBE3D-204ENST00000430071 PRDM13Q9H4Q3 707 aa13.93□□□□□ -0.18
UBE3D-204ENST00000430071 CNTD2Q9H8S5 307 aa13.93□□□□□ -0.18
UBE3D-204ENST00000430071 ELL3Q9HB65 397 aaPredicted RBP13.93□□□□□ -0.18
UBE3D-204ENST00000430071 EXOSC4Q9NPD3 245 aaKnown RBP13.93□□□□□ -0.18
UBE3D-204ENST00000430071 CDRT1O95170 752 aa13.92□□□□□ -0.18
UBE3D-204ENST00000430071 CD37P11049 281 aa13.92□□□□□ -0.18
UBE3D-204ENST00000430071 CEBPDP49716 269 aaPredicted RBP13.92□□□□□ -0.18
UBE3D-204ENST00000430071 DGUOKQ16854 277 aa13.92□□□□□ -0.18
UBE3D-204ENST00000430071 ATPAF1Q5TC12 328 aaPredicted RBP13.92□□□□□ -0.18
UBE3D-204ENST00000430071 PNLDC1Q8NA58 520 aaKnown RBP13.92□□□□□ -0.18
UBE3D-204ENST00000430071 LY6G5BQ8NDX9 201 aa13.92□□□□□ -0.18
UBE3D-204ENST00000430071 PXT1Q8NFP0 134 aa13.92□□□□□ -0.18
UBE3D-204ENST00000430071 OR4D6Q8NGJ1 314 aa13.92□□□□□ -0.18
UBE3D-204ENST00000430071 OR10K1Q8NGX5 313 aa13.92□□□□□ -0.18
UBE3D-204ENST00000430071 EMG1Q92979 244 aaKnown RBP13.92□□□□□ -0.18
UBE3D-204ENST00000430071 CHCHD6Q9BRQ6 235 aa13.92□□□□□ -0.18
UBE3D-204ENST00000430071 SLITRK2Q9H156 845 aa13.92□□□□□ -0.18
UBE3D-204ENST00000430071 SSR3Q9UNL2 185 aa13.92□□□□□ -0.18
UBE3D-204ENST00000430071 TRAV1-2A0A0B4J238 106 aa13.91□□□□□ -0.18
UBE3D-204ENST00000430071 RFPL4AA6NLU0 287 aa13.91□□□□□ -0.18
UBE3D-204ENST00000430071 RFPL4AL1F8VTS6 287 aa13.91□□□□□ -0.18
UBE3D-204ENST00000430071 KNG1P01042 644 aa13.91□□□□□ -0.18
UBE3D-204ENST00000430071 LIPFP07098 398 aa13.91□□□□□ -0.18
UBE3D-204ENST00000430071 ALDH3B2P48448 385 aa13.91□□□□□ -0.18
UBE3D-204ENST00000430071 METTL11BQ5VVY1 283 aa13.91□□□□□ -0.18
UBE3D-204ENST00000430071 ZNF788Q6ZQV5 615 aa13.91□□□□□ -0.18
UBE3D-204ENST00000430071 Q8IYB0 196 aa13.91□□□□□ -0.18
UBE3D-204ENST00000430071 FAM58AQ8N1B3 248 aa13.91□□□□□ -0.18
UBE3D-204ENST00000430071 CD177Q8N6Q3 437 aa13.91□□□□□ -0.18
UBE3D-204ENST00000430071 Q8N7P7 452 aa13.91□□□□□ -0.18
UBE3D-204ENST00000430071 OR13F1Q8NGS4 319 aa13.91□□□□□ -0.18
UBE3D-204ENST00000430071 ZDHHC16Q969W1 377 aa13.91□□□□□ -0.18
UBE3D-204ENST00000430071 SLC25A28Q96A46 364 aa13.91□□□□□ -0.18
UBE3D-204ENST00000430071 RNF167Q9H6Y7 350 aa13.91□□□□□ -0.18
UBE3D-204ENST00000430071 HMG20AQ9NP66 347 aa13.91□□□□□ -0.18
UBE3D-204ENST00000430071 SIRT7Q9NRC8 400 aa13.91□□□□□ -0.18
UBE3D-204ENST00000430071 MRPS28Q9Y2Q9 187 aaKnown RBP13.91□□□□□ -0.18
UBE3D-204ENST00000430071 AK6Q9Y3D8 172 aaKnown RBP13.91□□□□□ -0.18
UBE3D-204ENST00000430071 CMYA5Q8N3K9 4069 aa13.91□□□□□ -0.18
UBE3D-204ENST00000430071 IGHV1-69DA0A0B4J2H0 117 aa13.9□□□□□ -0.18
UBE3D-204ENST00000430071 LOC100506127A0A0U1RQW1 187 aa13.9□□□□□ -0.18
UBE3D-204ENST00000430071 CLDN34H7C241 214 aa13.9□□□□□ -0.18
UBE3D-204ENST00000430071 IGHV1-69P01742 117 aa13.9□□□□□ -0.18
UBE3D-204ENST00000430071 MELTFP08582 738 aa13.9□□□□□ -0.18
UBE3D-204ENST00000430071 PRKACAP17612 351 aa13.9□□□□□ -0.18
UBE3D-204ENST00000430071 PRDX2P32119 198 aa13.9□□□□□ -0.18
UBE3D-204ENST00000430071 SNU13P55769 128 aaKnown RBP13.9□□□□□ -0.18
UBE3D-204ENST00000430071 KLRD1Q13241 179 aa13.9□□□□□ -0.18
UBE3D-204ENST00000430071 C1orf100Q5SVJ3 147 aa13.9□□□□□ -0.18
UBE3D-204ENST00000430071 C16orf87Q6PH81 154 aa13.9□□□□□ -0.18
UBE3D-204ENST00000430071 Q6YL49 198 aa13.9□□□□□ -0.18
UBE3D-204ENST00000430071 SLC36A1Q7Z2H8 476 aa13.9□□□□□ -0.18
UBE3D-204ENST00000430071 VMO1Q7Z5L0 202 aa13.9□□□□□ -0.18
UBE3D-204ENST00000430071 PIP4P2Q8N4L2 257 aa13.9□□□□□ -0.18
UBE3D-204ENST00000430071 Q8NFD4 153 aa13.9□□□□□ -0.18
UBE3D-204ENST00000430071 UQCC2Q9BRT2 126 aa13.9□□□□□ -0.18
UBE3D-204ENST00000430071 DCTN5Q9BTE1 182 aa13.9□□□□□ -0.18
UBE3D-204ENST00000430071 CENPOQ9BU64 300 aa13.9□□□□□ -0.18
UBE3D-204ENST00000430071 CHIAQ9BZP6 476 aa13.9□□□□□ -0.18
UBE3D-204ENST00000430071 ONECUT1Q9UBC0 465 aa13.9□□□□□ -0.18
UBE3D-204ENST00000430071 OR14J1Q9UGF5 321 aa13.9□□□□□ -0.18
UBE3D-204ENST00000430071 ING4Q9UNL4 249 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms