RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 OR5B3Q8NH48 314 aa11.28□□□□□ -0.6
PTCH1-207ENST00000429896 YIPF5Q969M3 257 aa11.28□□□□□ -0.6
PTCH1-207ENST00000429896 LINC00470Q9BZP3 86 aa11.28□□□□□ -0.6
PTCH1-207ENST00000429896 E9PLN8 166 aa11.28□□□□□ -0.6
PTCH1-207ENST00000429896 CLPSP04118 112 aa11.28□□□□□ -0.6
PTCH1-207ENST00000429896 SLC25A30Q5SVS4 291 aa11.28□□□□□ -0.6
PTCH1-207ENST00000429896 MDS2Q8NDY4 140 aa11.28□□□□□ -0.6
PTCH1-207ENST00000429896 ST8SIA2Q92186 375 aa11.28□□□□□ -0.6
PTCH1-207ENST00000429896 TMEM230Q96A57 120 aa11.28□□□□□ -0.6
PTCH1-207ENST00000429896 VKORC1Q9BQB6 163 aa11.28□□□□□ -0.6
PTCH1-207ENST00000429896 GPR31O00270 319 aa11.27□□□□□ -0.6
PTCH1-207ENST00000429896 CRYBA1P05813 215 aa11.27□□□□□ -0.6
PTCH1-207ENST00000429896 CTXN2P0C2S0 81 aa11.27□□□□□ -0.6
PTCH1-207ENST00000429896 HLXQ14774 488 aaPredicted RBP11.27□□□□□ -0.6
PTCH1-207ENST00000429896 DTX1Q86Y01 620 aa11.27□□□□□ -0.6
PTCH1-207ENST00000429896 FLVCR2Q9UPI3 526 aa11.27□□□□□ -0.6
PTCH1-207ENST00000429896 TRAV38-1A0A0B4J264 116 aa11.27□□□□□ -0.6
PTCH1-207ENST00000429896 LRP5LA4QPB2 252 aa11.27□□□□□ -0.6
PTCH1-207ENST00000429896 H3BMH7 237 aa11.27□□□□□ -0.6
PTCH1-207ENST00000429896 ELK1P19419 428 aa11.27□□□□□ -0.6
PTCH1-207ENST00000429896 TOR2AQ5JU69 321 aa11.27□□□□□ -0.6
PTCH1-207ENST00000429896 MOGAT3Q86VF5 341 aa11.27□□□□□ -0.6
PTCH1-207ENST00000429896 C9orf106Q8NAJ2 232 aa11.27□□□□□ -0.6
PTCH1-207ENST00000429896 DIRC2Q96SL1 478 aa11.27□□□□□ -0.6
PTCH1-207ENST00000429896 SPRR3Q9UBC9 169 aa11.27□□□□□ -0.6
PTCH1-207ENST00000429896 AK3Q9UIJ7 227 aa11.27□□□□□ -0.6
PTCH1-207ENST00000429896 IFITM5A6NNB3 132 aa11.27□□□□□ -0.61
PTCH1-207ENST00000429896 GABRG1Q8N1C3 465 aa11.27□□□□□ -0.61
PTCH1-207ENST00000429896 ACY3Q96HD9 319 aa11.27□□□□□ -0.61
PTCH1-207ENST00000429896 AKR1E2Q96JD6 320 aa11.27□□□□□ -0.61
PTCH1-207ENST00000429896 NAGKQ9UJ70 344 aa11.27□□□□□ -0.61
PTCH1-207ENST00000429896 TRAV1-2A0A0B4J238 106 aa11.27□□□□□ -0.61
PTCH1-207ENST00000429896 DCTN6O00399 190 aa11.27□□□□□ -0.61
PTCH1-207ENST00000429896 ZFPL1O95159 310 aa11.27□□□□□ -0.61
PTCH1-207ENST00000429896 LIMS3P0CW19 117 aa11.27□□□□□ -0.61
PTCH1-207ENST00000429896 LIMS4P0CW20 117 aa11.27□□□□□ -0.61
PTCH1-207ENST00000429896 KISS1Q15726 138 aa11.27□□□□□ -0.61
PTCH1-207ENST00000429896 BTNL3Q6UXE8 466 aa11.27□□□□□ -0.61
PTCH1-207ENST00000429896 C10orf35Q96D05 121 aa11.27□□□□□ -0.61
PTCH1-207ENST00000429896 SLIRPQ9GZT3 109 aaKnown RBP11.27□□□□□ -0.61
PTCH1-207ENST00000429896 ACSM4P0C7M7 580 aa11.27□□□□□ -0.61
PTCH1-207ENST00000429896 ZNF770Q6IQ21 691 aaPredicted RBP11.27□□□□□ -0.61
PTCH1-207ENST00000429896 WDR31Q8NA23 367 aa11.27□□□□□ -0.61
PTCH1-207ENST00000429896 OR8B3Q8NGG8 313 aa11.27□□□□□ -0.61
PTCH1-207ENST00000429896 C14orf79Q96F83 325 aa11.27□□□□□ -0.61
PTCH1-207ENST00000429896 OR8B2Q96RD0 313 aa11.27□□□□□ -0.61
PTCH1-207ENST00000429896 PLPP2O43688 288 aa11.26□□□□□ -0.61
PTCH1-207ENST00000429896 CLDN14O95500 239 aa11.26□□□□□ -0.61
PTCH1-207ENST00000429896 SOHLH1Q5JUK2 328 aa11.26□□□□□ -0.61
PTCH1-207ENST00000429896 FAM74A1Q5RGS3 127 aa11.26□□□□□ -0.61
PTCH1-207ENST00000429896 TMUB2Q71RG4 321 aa11.26□□□□□ -0.61
PTCH1-207ENST00000429896 RPUSD4Q96CM3 377 aaKnown RBP11.26□□□□□ -0.61
PTCH1-207ENST00000429896 OR2J1Q9GZK6 312 aa11.26□□□□□ -0.61
PTCH1-207ENST00000429896 RNF7Q9UBF6 113 aa11.26□□□□□ -0.61
PTCH1-207ENST00000429896 CDC34P49427 236 aaPredicted RBP11.26□□□□□ -0.61
PTCH1-207ENST00000429896 PRSS12P56730 875 aa11.26□□□□□ -0.61
PTCH1-207ENST00000429896 RAP2BP61225 183 aa11.26□□□□□ -0.61
PTCH1-207ENST00000429896 SNTB1Q13884 538 aaKnown RBP11.26□□□□□ -0.61
PTCH1-207ENST00000429896 RTL8BQ17RB0 113 aa11.26□□□□□ -0.61
PTCH1-207ENST00000429896 SHISA5Q8N114 240 aa11.26□□□□□ -0.61
PTCH1-207ENST00000429896 ZNF519Q8TB69 540 aa11.26□□□□□ -0.61
PTCH1-207ENST00000429896 SRP14P37108 136 aaKnown RBP11.26□□□□□ -0.61
PTCH1-207ENST00000429896 Q6ZS92 163 aa11.26□□□□□ -0.61
PTCH1-207ENST00000429896 SLC17A5Q9NRA2 495 aa11.26□□□□□ -0.61
PTCH1-207ENST00000429896 PIKFYVEQ9Y2I7 2098 aa11.26□□□□□ -0.61
PTCH1-207ENST00000429896 GGTLC2Q14390 218 aa11.26□□□□□ -0.61
PTCH1-207ENST00000429896 C20orf202A1L168 122 aa11.26□□□□□ -0.61
PTCH1-207ENST00000429896 RBP4P02753 201 aa11.26□□□□□ -0.61
PTCH1-207ENST00000429896 OR4A8P0C604 315 aa11.26□□□□□ -0.61
PTCH1-207ENST00000429896 SUB1P53999 127 aaKnown RBP eCLIP11.26□□□□□ -0.61
PTCH1-207ENST00000429896 FAM27E3Q08E93 113 aa11.26□□□□□ -0.61
PTCH1-207ENST00000429896 OR52I2Q8NH67 350 aa11.26□□□□□ -0.61
PTCH1-207ENST00000429896 SCMH1Q96GD3 660 aa11.26□□□□□ -0.61
PTCH1-207ENST00000429896 S1PR3Q99500 378 aa11.26□□□□□ -0.61
PTCH1-207ENST00000429896 NIPSNAP3BQ9BS92 247 aa11.26□□□□□ -0.61
PTCH1-207ENST00000429896 ZNF331Q9NQX6 463 aaPredicted RBP11.26□□□□□ -0.61
PTCH1-207ENST00000429896 C3orf80F5H4A9 247 aa11.25□□□□□ -0.61
PTCH1-207ENST00000429896 ADRA2AP08913 450 aa11.25□□□□□ -0.61
PTCH1-207ENST00000429896 NKX2-1P43699 371 aaPredicted RBP11.25□□□□□ -0.61
PTCH1-207ENST00000429896 HIST2H3AQ71DI3 136 aa11.25□□□□□ -0.61
PTCH1-207ENST00000429896 SOX7Q9BT81 388 aa11.25□□□□□ -0.61
PTCH1-207ENST00000429896 ZNF629Q9UEG4 869 aaPredicted RBP11.25□□□□□ -0.61
PTCH1-207ENST00000429896 TMEM30CPA0ZSE6 113 aa11.25□□□□□ -0.61
PTCH1-207ENST00000429896 J3KRW8 73 aa11.25□□□□□ -0.61
PTCH1-207ENST00000429896 LILRB4Q8NHJ6 448 aa11.25□□□□□ -0.61
PTCH1-207ENST00000429896 SLC35D1Q9NTN3 355 aa11.25□□□□□ -0.61
PTCH1-207ENST00000429896 OR5D13Q8NGL4 314 aa11.25□□□□□ -0.61
PTCH1-207ENST00000429896 UQCC2Q9BRT2 126 aa11.25□□□□□ -0.61
PTCH1-207ENST00000429896 ZNF785A8K8V0 405 aa11.25□□□□□ -0.61
PTCH1-207ENST00000429896 HTN1P15515 57 aa11.25□□□□□ -0.61
PTCH1-207ENST00000429896 NUDCD2Q8WVJ2 157 aa11.25□□□□□ -0.61
PTCH1-207ENST00000429896 GAL3ST2Q9H3Q3 398 aa11.25□□□□□ -0.61
PTCH1-207ENST00000429896 TIMM9Q9Y5J7 89 aa11.25□□□□□ -0.61
PTCH1-207ENST00000429896 TMEM210A6NLX4 147 aa11.25□□□□□ -0.61
PTCH1-207ENST00000429896 ADAM20O43506 726 aa11.25□□□□□ -0.61
PTCH1-207ENST00000429896 GNLYP22749 145 aa11.25□□□□□ -0.61
PTCH1-207ENST00000429896 TIMM23BQ5SRD1 257 aa11.25□□□□□ -0.61
PTCH1-207ENST00000429896 TMPRSS13Q9BYE2 586 aa11.25□□□□□ -0.61
PTCH1-207ENST00000429896 PLXNA2O75051 1894 aa11.25□□□□□ -0.61
PTCH1-207ENST00000429896 GOSR1O95249 250 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms