RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 SPTBP11277 2137 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 IGHV1-45A0A0A0MS14 117 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 PMS2P1A4D2B8 440 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 OR5H15A6NDH6 313 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 FAM90A10PA6NDY2 464 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 FAM90A18PA6NE21 464 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 FAM90A16PA6NEW6 464 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 FAM90A20PA6NIJ5 464 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 FAM90A8PA6NJQ4 464 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 FAM90A7PA6NKC0 464 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 FAM90A22PA8MWA6 464 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 FAM90A12PA8MX19 464 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 FAM90A5PA8MXJ8 464 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 FAM90A23PA8MXZ1 464 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 C9J4A7 227 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 H7C1Q1 480 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 SGCEO43556 437 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 RAMP1O60894 148 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 GLAP06280 429 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 FAM90A15PP0C7V4 464 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 FAM90A13PP0C7W8 464 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 FAM90A14PP0C7W9 464 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 FAM90A24PP0C7X0 464 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 MUC1P15941 1255 aaPredicted RBP7.56□□□□□ -1.2
GABPB1-205ENST00000429662 FAHP16930 419 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 PI3P19957 117 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 CRYGSP22914 178 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 DUSP1P28562 367 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 GLP1RP43220 463 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 RBP2P50120 134 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 FUT6P51993 359 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 ARHGDIBP52566 201 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 UCP2P55851 309 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 RAC3P60763 192 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 RAB5BP61020 215 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 KRTAP27-1Q3LI81 207 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 TMEM42Q69YG0 159 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 TMEM211Q6ICI0 200 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 BOLLQ8N9W6 283 aaKnown RBP7.56□□□□□ -1.2
GABPB1-205ENST00000429662 LFNGQ8NES3 379 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 OR51F2Q8NH61 342 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 OR1F12Q8NHA8 337 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 GLYATL2Q8WU03 294 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 ROBO4Q8WZ75 1007 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 BORCS8Q96FH0 119 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 LIN37Q96GY3 246 aaPredicted RBP7.56□□□□□ -1.2
GABPB1-205ENST00000429662 ABHD14BQ96IU4 210 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 KIRREL1Q96J84 757 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 SGCZQ96LD1 299 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 IMMP1LQ96LU5 166 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 SULT4A1Q9BR01 284 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 SAV1Q9H4B6 383 aaPredicted RBP7.56□□□□□ -1.2
GABPB1-205ENST00000429662 RNF122Q9H9V4 155 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 ZNF286AQ9HBT8 521 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 SH2D2AQ9NP31 389 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 ASCL3Q9NQ33 180 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 FBXL17Q9UF56 701 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 TMED3Q9Y3Q3 217 aa7.56□□□□□ -1.2
GABPB1-205ENST00000429662 EXPH5Q8NEV8 1989 aa7.55□□□□□ -1.2
GABPB1-205ENST00000429662 A0A1B0GW64 132 aa7.55□□□□□ -1.2
GABPB1-205ENST00000429662 A0A1W2PQM1 296 aa7.55□□□□□ -1.2
GABPB1-205ENST00000429662 OR6C6A6NF89 314 aa7.55□□□□□ -1.2
GABPB1-205ENST00000429662 ZNF850A8MQ14 1090 aa7.55□□□□□ -1.2
GABPB1-205ENST00000429662 K7ENP7 123 aa7.55□□□□□ -1.2
GABPB1-205ENST00000429662 ZIC3O60481 467 aa7.55□□□□□ -1.2
GABPB1-205ENST00000429662 LILRA1O75019 489 aa7.55□□□□□ -1.2
GABPB1-205ENST00000429662 TSPAN15O95858 294 aa7.55□□□□□ -1.2
GABPB1-205ENST00000429662 OPN1LWP04000 364 aa7.55□□□□□ -1.2
GABPB1-205ENST00000429662 SFTA3P0C7M3 94 aa7.55□□□□□ -1.2
GABPB1-205ENST00000429662 MYF5P13349 255 aa7.55□□□□□ -1.2
GABPB1-205ENST00000429662 GABRR1P24046 479 aa7.55□□□□□ -1.2
GABPB1-205ENST00000429662 CHATP28329 748 aa7.55□□□□□ -1.2
GABPB1-205ENST00000429662 SRD5A2P31213 254 aa7.55□□□□□ -1.2
GABPB1-205ENST00000429662 LPAR6P43657 344 aa7.55□□□□□ -1.2
GABPB1-205ENST00000429662 DUSP3P51452 185 aaPredicted RBP7.55□□□□□ -1.2
GABPB1-205ENST00000429662 AKR1C2P52895 323 aa7.55□□□□□ -1.2
GABPB1-205ENST00000429662 PIGPP57054 158 aa7.55□□□□□ -1.2
GABPB1-205ENST00000429662 TMEM33P57088 247 aa7.55□□□□□ -1.2
GABPB1-205ENST00000429662 AKR1C1Q04828 323 aa7.55□□□□□ -1.2
GABPB1-205ENST00000429662 PDZK1IP1Q13113 114 aa7.55□□□□□ -1.2
GABPB1-205ENST00000429662 TMEM187Q14656 261 aa7.55□□□□□ -1.2
GABPB1-205ENST00000429662 RSPO1Q2MKA7 263 aaPredicted RBP7.55□□□□□ -1.2
GABPB1-205ENST00000429662 NRN1LQ496H8 165 aa7.55□□□□□ -1.2
GABPB1-205ENST00000429662 RIPPLY2Q5TAB7 128 aa7.55□□□□□ -1.2
GABPB1-205ENST00000429662 RAET1LQ5VY80 246 aa7.55□□□□□ -1.2
GABPB1-205ENST00000429662 GUSBP11Q6P575 273 aa7.55□□□□□ -1.2
GABPB1-205ENST00000429662 INO80CQ6PI98 192 aaPredicted RBP7.55□□□□□ -1.2
GABPB1-205ENST00000429662 Q6ZS49 121 aa7.55□□□□□ -1.2
GABPB1-205ENST00000429662 C6orf201Q7Z4U5 140 aa7.55□□□□□ -1.2
GABPB1-205ENST00000429662 RTN4RL2Q86UN3 420 aa7.55□□□□□ -1.2
GABPB1-205ENST00000429662 OSR2Q8N2R0 312 aa7.55□□□□□ -1.2
GABPB1-205ENST00000429662 OR5D18Q8NGL1 313 aa7.55□□□□□ -1.2
GABPB1-205ENST00000429662 PIGTQ969N2 578 aa7.55□□□□□ -1.2
GABPB1-205ENST00000429662 REEP6Q96HR9 211 aa7.55□□□□□ -1.2
GABPB1-205ENST00000429662 C18orf12Q96KH6 178 aa7.55□□□□□ -1.2
GABPB1-205ENST00000429662 GINS3Q9BRX5 216 aa7.55□□□□□ -1.2
GABPB1-205ENST00000429662 PBDC1Q9BVG4 233 aa7.55□□□□□ -1.2
GABPB1-205ENST00000429662 EGLN1Q9GZT9 426 aa7.55□□□□□ -1.2
GABPB1-205ENST00000429662 ACKR4Q9NPB9 350 aa7.55□□□□□ -1.2
GABPB1-205ENST00000429662 ATPIF1Q9UII2 106 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms