RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 KIRREL1Q96J84 757 aa11.52□□□□□ -0.57
SNRNP200-202ENST00000429650 ADGRG7Q96K78 797 aa11.52□□□□□ -0.57
SNRNP200-202ENST00000429650 SPENQ96T58 3664 aaKnown RBP11.51□□□□□ -0.57
SNRNP200-202ENST00000429650 XRCC2O43543 280 aa11.51□□□□□ -0.57
SNRNP200-202ENST00000429650 PDCD6O75340 191 aa11.51□□□□□ -0.57
SNRNP200-202ENST00000429650 GLI4P10075 376 aa11.51□□□□□ -0.57
SNRNP200-202ENST00000429650 RAB13P51153 203 aa11.51□□□□□ -0.57
SNRNP200-202ENST00000429650 PDCD1Q15116 288 aa11.51□□□□□ -0.57
SNRNP200-202ENST00000429650 OR8B8Q15620 311 aa11.51□□□□□ -0.57
SNRNP200-202ENST00000429650 SWI5Q1ZZU3 235 aa11.51□□□□□ -0.57
SNRNP200-202ENST00000429650 FAM76BQ5HYJ3 339 aa11.51□□□□□ -0.57
SNRNP200-202ENST00000429650 PLCXD3Q63HM9 321 aa11.51□□□□□ -0.57
SNRNP200-202ENST00000429650 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.51□□□□□ -0.57
SNRNP200-202ENST00000429650 OR10D3Q8NH80 312 aa11.51□□□□□ -0.57
SNRNP200-202ENST00000429650 GLYATL2Q8WU03 294 aa11.51□□□□□ -0.57
SNRNP200-202ENST00000429650 MOB3AQ96BX8 217 aa11.51□□□□□ -0.57
SNRNP200-202ENST00000429650 WFDC1Q9HC57 220 aa11.51□□□□□ -0.57
SNRNP200-202ENST00000429650 SLC7A11Q9UPY5 501 aa11.51□□□□□ -0.57
SNRNP200-202ENST00000429650 NCOR1O75376 2440 aa11.51□□□□□ -0.57
SNRNP200-202ENST00000429650 LRRC3CA6NJW4 275 aa11.51□□□□□ -0.57
SNRNP200-202ENST00000429650 PRSS44E7EML9 344 aa11.51□□□□□ -0.57
SNRNP200-202ENST00000429650 TCN2P20062 427 aa11.51□□□□□ -0.57
SNRNP200-202ENST00000429650 RIPPLY2Q5TAB7 128 aa11.51□□□□□ -0.57
SNRNP200-202ENST00000429650 SKA3Q8IX90 412 aa11.51□□□□□ -0.57
SNRNP200-202ENST00000429650 OR52M1Q8NGK5 317 aa11.51□□□□□ -0.57
SNRNP200-202ENST00000429650 OR11L1Q8NGX0 322 aa11.51□□□□□ -0.57
SNRNP200-202ENST00000429650 OR2V1Q8NHB1 315 aa11.51□□□□□ -0.57
SNRNP200-202ENST00000429650 RXFP4Q8TDU9 374 aa11.51□□□□□ -0.57
SNRNP200-202ENST00000429650 PIGCQ92535 297 aa11.51□□□□□ -0.57
SNRNP200-202ENST00000429650 PARP12Q9H0J9 701 aaKnown RBP11.51□□□□□ -0.57
SNRNP200-202ENST00000429650 FAM212BQ9NTI7 297 aaPredicted RBP11.51□□□□□ -0.57
SNRNP200-202ENST00000429650 TINAGQ9UJW2 476 aa11.51□□□□□ -0.57
SNRNP200-202ENST00000429650 ZDHHC8Q9ULC8 765 aa11.51□□□□□ -0.57
SNRNP200-202ENST00000429650 GPR179Q6PRD1 2367 aa11.5□□□□□ -0.57
SNRNP200-202ENST00000429650 MEX3AA1L020 520 aaKnown RBP11.5□□□□□ -0.57
SNRNP200-202ENST00000429650 GPR137BO60478 399 aa11.5□□□□□ -0.57
SNRNP200-202ENST00000429650 UCP3P55916 312 aa11.5□□□□□ -0.57
SNRNP200-202ENST00000429650 CLDN15P56746 228 aa11.5□□□□□ -0.57
SNRNP200-202ENST00000429650 RBM11P57052 281 aaKnown RBP11.5□□□□□ -0.57
SNRNP200-202ENST00000429650 PCBD1P61457 104 aa11.5□□□□□ -0.57
SNRNP200-202ENST00000429650 Q0VFX4 171 aa11.5□□□□□ -0.57
SNRNP200-202ENST00000429650 MALLQ13021 153 aa11.5□□□□□ -0.57
SNRNP200-202ENST00000429650 DAZAP2Q15038 168 aaPredicted RBP11.5□□□□□ -0.57
SNRNP200-202ENST00000429650 LGI3Q8N145 548 aa11.5□□□□□ -0.57
SNRNP200-202ENST00000429650 GPR35Q9HC97 309 aa11.5□□□□□ -0.57
SNRNP200-202ENST00000429650 STARD10Q9Y365 291 aa11.5□□□□□ -0.57
SNRNP200-202ENST00000429650 ZNF816-ZNF321PA0A0X1KG74 233 aa11.5□□□□□ -0.57
SNRNP200-202ENST00000429650 PATE3B3GLJ2 98 aa11.5□□□□□ -0.57
SNRNP200-202ENST00000429650 ZNF587BE7ETH6 402 aa11.5□□□□□ -0.57
SNRNP200-202ENST00000429650 CRYBA1P05813 215 aa11.5□□□□□ -0.57
SNRNP200-202ENST00000429650 SEC11BP0C7V7 166 aa11.5□□□□□ -0.57
SNRNP200-202ENST00000429650 DUSP1P28562 367 aa11.5□□□□□ -0.57
SNRNP200-202ENST00000429650 RPS18P62269 152 aaKnown RBP11.5□□□□□ -0.57
SNRNP200-202ENST00000429650 WIPI1Q5MNZ9 446 aaPredicted RBP11.5□□□□□ -0.57
SNRNP200-202ENST00000429650 CALHM1Q8IU99 346 aa11.5□□□□□ -0.57
SNRNP200-202ENST00000429650 MAFAQ8NHW3 353 aaPredicted RBP11.5□□□□□ -0.57
SNRNP200-202ENST00000429650 SYT3Q9BQG1 590 aa11.5□□□□□ -0.57
SNRNP200-202ENST00000429650 FAM186AA6NE01 2351 aa11.49□□□□□ -0.57
SNRNP200-202ENST00000429650 PHF1O43189 567 aaPredicted RBP11.49□□□□□ -0.57
SNRNP200-202ENST00000429650 DANCRP0C864 163 aa11.49□□□□□ -0.57
SNRNP200-202ENST00000429650 AADACP22760 399 aa11.49□□□□□ -0.57
SNRNP200-202ENST00000429650 GLP1RP43220 463 aa11.49□□□□□ -0.57
SNRNP200-202ENST00000429650 HOXA1P49639 335 aaPredicted RBP11.49□□□□□ -0.57
SNRNP200-202ENST00000429650 AVPI1Q5T686 147 aa11.49□□□□□ -0.57
SNRNP200-202ENST00000429650 GPR157Q5UAW9 335 aa11.49□□□□□ -0.57
SNRNP200-202ENST00000429650 FBXW12Q6X9E4 464 aa11.49□□□□□ -0.57
SNRNP200-202ENST00000429650 PPP1R32Q7Z5V6 425 aa11.49□□□□□ -0.57
SNRNP200-202ENST00000429650 SECTM1Q8WVN6 248 aa11.49□□□□□ -0.57
SNRNP200-202ENST00000429650 AKR1E2Q96JD6 320 aa11.49□□□□□ -0.57
SNRNP200-202ENST00000429650 GINS3Q9BRX5 216 aa11.49□□□□□ -0.57
SNRNP200-202ENST00000429650 RSRP1Q9BUV0 290 aa11.49□□□□□ -0.57
SNRNP200-202ENST00000429650 CACFD1Q9UGQ2 172 aa11.49□□□□□ -0.57
SNRNP200-202ENST00000429650 BORCS7-ASMTA0A0B4J1R7 106 aa11.49□□□□□ -0.57
SNRNP200-202ENST00000429650 TRAPPC6AO75865 159 aa11.49□□□□□ -0.57
SNRNP200-202ENST00000429650 TSPAN15O95858 294 aa11.49□□□□□ -0.57
SNRNP200-202ENST00000429650 MMP7P09237 267 aaPredicted RBP11.49□□□□□ -0.57
SNRNP200-202ENST00000429650 OTX2P32243 289 aa11.49□□□□□ -0.57
SNRNP200-202ENST00000429650 P2RY1P47900 373 aa11.49□□□□□ -0.57
SNRNP200-202ENST00000429650 HERV-K104P61576 105 aa11.49□□□□□ -0.57
SNRNP200-202ENST00000429650 IL13RA2Q14627 380 aa11.49□□□□□ -0.57
SNRNP200-202ENST00000429650 PEA15Q15121 130 aa11.49□□□□□ -0.57
SNRNP200-202ENST00000429650 MIDNQ504T8 468 aa11.49□□□□□ -0.57
SNRNP200-202ENST00000429650 TMEM211Q6ICI0 200 aa11.49□□□□□ -0.57
SNRNP200-202ENST00000429650 DMBX1Q8NFW5 382 aa11.49□□□□□ -0.57
SNRNP200-202ENST00000429650 ABHD3Q8WU67 409 aa11.49□□□□□ -0.57
SNRNP200-202ENST00000429650 ZNF442Q9H7R0 627 aa11.49□□□□□ -0.57
SNRNP200-202ENST00000429650 DEPPQ9NTK1 212 aa11.49□□□□□ -0.57
SNRNP200-202ENST00000429650 AHCTF1Q8WYP5 2266 aa11.48□□□□□ -0.57
SNRNP200-202ENST00000429650 ST8SIA3O43173 380 aa11.48□□□□□ -0.57
SNRNP200-202ENST00000429650 GATCO43716 136 aaKnown RBP11.48□□□□□ -0.57
SNRNP200-202ENST00000429650 NME2P1O60361 137 aa11.48□□□□□ -0.57
SNRNP200-202ENST00000429650 OR7C1O76099 320 aaPredicted RBP11.48□□□□□ -0.57
SNRNP200-202ENST00000429650 SPP1P10451 314 aa11.48□□□□□ -0.57
SNRNP200-202ENST00000429650 FUT3P21217 361 aa11.48□□□□□ -0.57
SNRNP200-202ENST00000429650 SNCAP37840 140 aa11.48□□□□□ -0.57
SNRNP200-202ENST00000429650 RPL35P42766 123 aaKnown RBP11.48□□□□□ -0.57
SNRNP200-202ENST00000429650 DUSP3P51452 185 aaPredicted RBP11.48□□□□□ -0.57
SNRNP200-202ENST00000429650 ZNF611Q8N823 705 aa11.48□□□□□ -0.57
SNRNP200-202ENST00000429650 CCDC71LQ8N9Z2 235 aa11.48□□□□□ -0.57
SNRNP200-202ENST00000429650 SPSB4Q96A44 273 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms