RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 ZNF581Q9P0T4 197 aa7.05□□□□□ -1.28
HPS4-205ENST00000429411 GPR132Q9UNW8 380 aa7.05□□□□□ -1.28
HPS4-205ENST00000429411 ST3GAL6Q9Y274 331 aa7.05□□□□□ -1.28
HPS4-205ENST00000429411 IGKV1D-8A0A087WSZ0 117 aa7.05□□□□□ -1.28
HPS4-205ENST00000429411 TRAV34A0A0B4J273 112 aa7.05□□□□□ -1.28
HPS4-205ENST00000429411 TMEM14DPA8MWL7 114 aa7.05□□□□□ -1.28
HPS4-205ENST00000429411 C22orf46C9J442 243 aa7.05□□□□□ -1.28
HPS4-205ENST00000429411 GEMIN2O14893 280 aaKnown RBP7.05□□□□□ -1.28
HPS4-205ENST00000429411 CST7O76096 145 aa7.05□□□□□ -1.28
HPS4-205ENST00000429411 CRYBA1P05813 215 aa7.05□□□□□ -1.28
HPS4-205ENST00000429411 SLC25A4P12235 298 aa7.05□□□□□ -1.28
HPS4-205ENST00000429411 ZNF44P15621 663 aa7.05□□□□□ -1.28
HPS4-205ENST00000429411 LPAR6P43657 344 aa7.05□□□□□ -1.28
HPS4-205ENST00000429411 SSR4P51571 173 aa7.05□□□□□ -1.28
HPS4-205ENST00000429411 MALLQ13021 153 aa7.05□□□□□ -1.28
HPS4-205ENST00000429411 SHBQ15464 509 aa7.05□□□□□ -1.28
HPS4-205ENST00000429411 OPN5Q6U736 354 aa7.05□□□□□ -1.28
HPS4-205ENST00000429411 LYZL2Q7Z4W2 148 aa7.05□□□□□ -1.28
HPS4-205ENST00000429411 OR9K2Q8NGE7 335 aa7.05□□□□□ -1.28
HPS4-205ENST00000429411 RSRP1Q9BUV0 290 aa7.05□□□□□ -1.28
HPS4-205ENST00000429411 MOB1AQ9H8S9 216 aa7.05□□□□□ -1.28
HPS4-205ENST00000429411 BIN3Q9NQY0 253 aa7.05□□□□□ -1.28
HPS4-205ENST00000429411 B3GAT1Q9P2W7 334 aa7.05□□□□□ -1.28
HPS4-205ENST00000429411 IGKV1-9A0A0C4DH69 117 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 DHRS3O75911 302 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 CLEC3BP05452 202 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 MSX1P28360 303 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 HOXA6P31267 233 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 PTGER4P35408 488 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 ZNF345Q14585 488 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 WIPI1Q5MNZ9 446 aaPredicted RBP7.04□□□□□ -1.28
HPS4-205ENST00000429411 TMEM268Q5VZI3 342 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 OR2M3Q8NG83 312 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 OR8U1Q8NH10 309 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 HIST1H2AAQ96QV6 131 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 RNF126Q9BV68 326 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 ESRP2Q9H6T0 727 aaKnown RBP7.04□□□□□ -1.28
HPS4-205ENST00000429411 RAB18Q9NP72 206 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 P4HTMQ9NXG6 502 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 CLEC5AQ9NY25 188 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 LPAR3Q9UBY5 353 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 MCTS1Q9ULC4 181 aaKnown RBP7.04□□□□□ -1.28
HPS4-205ENST00000429411 LOC390937A0A1W2PQ73 354 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 E9PLN8 166 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 HSD17B6O14756 317 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 ZNF32P17041 273 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 TBPP20226 339 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 EIF1P41567 113 aaKnown RBP7.04□□□□□ -1.28
HPS4-205ENST00000429411 RBP2P50120 134 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 MECP2P51608 486 aaKnown RBP7.04□□□□□ -1.28
HPS4-205ENST00000429411 ARF1P84077 181 aaKnown RBP7.04□□□□□ -1.28
HPS4-205ENST00000429411 ADIPOQQ15848 244 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 HAGHQ16775 308 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 CEACAM16Q2WEN9 425 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 ZNF529Q6P280 563 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 SLC16A13Q7RTY0 426 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 C5orf24Q7Z6I8 188 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 SELENOHQ8IZQ5 122 aaKnown RBP7.04□□□□□ -1.28
HPS4-205ENST00000429411 ZFP62Q8NB50 900 aaPredicted RBP7.04□□□□□ -1.28
HPS4-205ENST00000429411 OR51H1Q8NH63 302 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 RAB24Q969Q5 203 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 PHYHIPLQ96FC7 376 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 LURAP1Q96LR2 239 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 TMUB1Q9BVT8 246 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 NELFAQ9H3P2 528 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 CALHM2Q9HA72 323 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 PURGQ9UJV8 347 aaKnown RBP7.04□□□□□ -1.28
HPS4-205ENST00000429411 POLEQ07864 2286 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 DOCK10Q96BY6 2186 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 A0A1W2PQM1 296 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 NRASP01111 189 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 FABP1P07148 127 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 CSRP1P21291 193 aaKnown RBP7.04□□□□□ -1.28
HPS4-205ENST00000429411 RPS10P46783 165 aaKnown RBP7.04□□□□□ -1.28
HPS4-205ENST00000429411 MCEMP1Q8IX19 187 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 OR6X1Q8NH79 312 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 RXFP4Q8TDU9 374 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 TMEM230Q96A57 120 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 MRGPRFQ96AM1 343 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 KIRREL1Q96J84 757 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 SYT3Q9BQG1 590 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 CNTNAP3Q9BZ76 1288 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 MMP26Q9NRE1 261 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 FAM212BQ9NTI7 297 aaPredicted RBP7.04□□□□□ -1.28
HPS4-205ENST00000429411 AK3Q9UIJ7 227 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 PILRBQ9UKJ0 227 aa7.04□□□□□ -1.28
HPS4-205ENST00000429411 MUC22E2RYF6 1773 aaPredicted RBP7.04□□□□□ -1.28
HPS4-205ENST00000429411 PQLC2LA1A4F0 135 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 CDRT15L2A8MXV6 281 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 HS3ST1O14792 307 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 SSSCA1O60232 199 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 EIF3GO75821 320 aaKnown RBP eCLIP7.03□□□□□ -1.28
HPS4-205ENST00000429411 NBL1P41271 181 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 MEOX2P50222 304 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 RAB13P51153 203 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 NHLH2Q02577 135 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 TRIP6Q15654 476 aaKnown RBP7.03□□□□□ -1.28
HPS4-205ENST00000429411 PDZD11Q5EBL8 140 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 PHYHD1Q5SRE7 291 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 RDH5Q92781 318 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms