RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 CCL4P13236 92 aa10.83□□□□□ -0.68
CDH3-202ENST00000429102 BMP5P22003 454 aa10.83□□□□□ -0.68
CDH3-202ENST00000429102 ATP6V0CP27449 155 aa10.83□□□□□ -0.68
CDH3-202ENST00000429102 OTX2P32243 289 aa10.83□□□□□ -0.68
CDH3-202ENST00000429102 ZNF84P51523 738 aa10.83□□□□□ -0.68
CDH3-202ENST00000429102 DEFA6Q01524 100 aa10.83□□□□□ -0.68
CDH3-202ENST00000429102 CALHM1Q8IU99 346 aa10.83□□□□□ -0.68
CDH3-202ENST00000429102 GNG13Q9P2W3 67 aa10.83□□□□□ -0.68
CDH3-202ENST00000429102 A0A1W2PQM1 296 aa10.83□□□□□ -0.68
CDH3-202ENST00000429102 CRYM-AS1A6NIL9 109 aa10.83□□□□□ -0.68
CDH3-202ENST00000429102 ZNF705GA8MUZ8 300 aaPredicted RBP10.83□□□□□ -0.68
CDH3-202ENST00000429102 PTGDSP41222 190 aa10.83□□□□□ -0.68
CDH3-202ENST00000429102 TMEM267Q0VDI3 215 aaPredicted RBP10.83□□□□□ -0.68
CDH3-202ENST00000429102 ALKBH2Q6NS38 261 aa10.83□□□□□ -0.68
CDH3-202ENST00000429102 SLC16A14Q7RTX9 510 aa10.83□□□□□ -0.68
CDH3-202ENST00000429102 CHST5Q9GZS9 411 aa10.83□□□□□ -0.68
CDH3-202ENST00000429102 MOB1AQ9H8S9 216 aa10.83□□□□□ -0.68
CDH3-202ENST00000429102 MTCH2Q9Y6C9 303 aa10.83□□□□□ -0.68
CDH3-202ENST00000429102 CYB5BO43169 146 aa10.83□□□□□ -0.68
CDH3-202ENST00000429102 SCTP09683 121 aa10.83□□□□□ -0.68
CDH3-202ENST00000429102 IAPPP10997 89 aa10.83□□□□□ -0.68
CDH3-202ENST00000429102 NKX2-1P43699 371 aaPredicted RBP10.83□□□□□ -0.68
CDH3-202ENST00000429102 ZNF92Q03936 586 aa10.83□□□□□ -0.68
CDH3-202ENST00000429102 MALLQ13021 153 aa10.83□□□□□ -0.68
CDH3-202ENST00000429102 CEACAM16Q2WEN9 425 aa10.83□□□□□ -0.68
CDH3-202ENST00000429102 SLC7A10Q9NS82 523 aa10.83□□□□□ -0.68
CDH3-202ENST00000429102 ZDHHC8Q9ULC8 765 aa10.83□□□□□ -0.68
CDH3-202ENST00000429102 A0A0G2JMM0 328 aa10.82□□□□□ -0.68
CDH3-202ENST00000429102 A0A1W2PPB8 328 aa10.82□□□□□ -0.68
CDH3-202ENST00000429102 A0A1W2PRS3 328 aa10.82□□□□□ -0.68
CDH3-202ENST00000429102 KIR3DP1A8MWS1 328 aa10.82□□□□□ -0.68
CDH3-202ENST00000429102 TP53I11O14683 189 aa10.82□□□□□ -0.68
CDH3-202ENST00000429102 CTSDP07339 412 aaPredicted RBP10.82□□□□□ -0.68
CDH3-202ENST00000429102 MMP9P14780 707 aa10.82□□□□□ -0.68
CDH3-202ENST00000429102 NTF4P34130 210 aa10.82□□□□□ -0.68
CDH3-202ENST00000429102 RAB11AP62491 216 aa10.82□□□□□ -0.68
CDH3-202ENST00000429102 EWSR1Q01844 656 aaKnown RBP eCLIP10.82□□□□□ -0.68
CDH3-202ENST00000429102 WIPI1Q5MNZ9 446 aaPredicted RBP10.82□□□□□ -0.68
CDH3-202ENST00000429102 NUP210LQ5VU65 1888 aa10.82□□□□□ -0.68
CDH3-202ENST00000429102 CYB561D1Q8N8Q1 229 aa10.82□□□□□ -0.68
CDH3-202ENST00000429102 UBAC2Q8NBM4 344 aa10.82□□□□□ -0.68
CDH3-202ENST00000429102 CCDC74BQ96LY2 380 aa10.82□□□□□ -0.68
CDH3-202ENST00000429102 SRXN1Q9BYN0 137 aa10.82□□□□□ -0.68
CDH3-202ENST00000429102 ZNF576Q9H609 170 aa10.82□□□□□ -0.68
CDH3-202ENST00000429102 TGIF2-C20orf24A0A0A6YYL0 155 aa10.82□□□□□ -0.68
CDH3-202ENST00000429102 AQP7P3A6NL99 342 aa10.82□□□□□ -0.68
CDH3-202ENST00000429102 IFNA17P01571 189 aa10.82□□□□□ -0.68
CDH3-202ENST00000429102 IFNA4P05014 189 aa10.82□□□□□ -0.68
CDH3-202ENST00000429102 AFF3P51826 1226 aaKnown RBP10.82□□□□□ -0.68
CDH3-202ENST00000429102 MLF1P58340 268 aa10.82□□□□□ -0.68
CDH3-202ENST00000429102 MPV17LQ2QL34 196 aa10.82□□□□□ -0.68
CDH3-202ENST00000429102 OR2B11Q5JQS5 317 aa10.82□□□□□ -0.68
CDH3-202ENST00000429102 CRIP3Q6Q6R5 217 aa10.82□□□□□ -0.68
CDH3-202ENST00000429102 THNSL2Q86YJ6 484 aa10.82□□□□□ -0.68
CDH3-202ENST00000429102 MAML2Q8IZL2 1156 aaPredicted RBP10.82□□□□□ -0.68
CDH3-202ENST00000429102 SLC35B3Q9H1N7 401 aa10.82□□□□□ -0.68
CDH3-202ENST00000429102 H2AFB1P0C5Y9 115 aa10.82□□□□□ -0.68
CDH3-202ENST00000429102 OR8U8P0C7N1 319 aa10.82□□□□□ -0.68
CDH3-202ENST00000429102 CHATP28329 748 aa10.82□□□□□ -0.68
CDH3-202ENST00000429102 MRPS34P82930 218 aaKnown RBP10.82□□□□□ -0.68
CDH3-202ENST00000429102 TMEM187Q14656 261 aa10.82□□□□□ -0.68
CDH3-202ENST00000429102 LGI3Q8N145 548 aa10.82□□□□□ -0.68
CDH3-202ENST00000429102 OSR2Q8N2R0 312 aa10.82□□□□□ -0.68
CDH3-202ENST00000429102 C15orf54Q8N8G6 183 aa10.82□□□□□ -0.68
CDH3-202ENST00000429102 ABHD3Q8WU67 409 aa10.82□□□□□ -0.68
CDH3-202ENST00000429102 ZNF286AQ9HBT8 521 aa10.82□□□□□ -0.68
CDH3-202ENST00000429102 C5orf52A6NGY3 159 aa10.81□□□□□ -0.68
CDH3-202ENST00000429102 ZNF587BE7ETH6 402 aa10.81□□□□□ -0.68
CDH3-202ENST00000429102 THBS4P35443 961 aa10.81□□□□□ -0.68
CDH3-202ENST00000429102 HAAOP46952 286 aa10.81□□□□□ -0.68
CDH3-202ENST00000429102 GPM6AP51674 278 aa10.81□□□□□ -0.68
CDH3-202ENST00000429102 DYNLT3P51808 116 aa10.81□□□□□ -0.68
CDH3-202ENST00000429102 ELLP55199 621 aaPredicted RBP10.81□□□□□ -0.68
CDH3-202ENST00000429102 AAED1Q7RTV5 226 aa10.81□□□□□ -0.68
CDH3-202ENST00000429102 OR2C3Q8N628 320 aa10.81□□□□□ -0.68
CDH3-202ENST00000429102 OR1K1Q8NGR3 316 aa10.81□□□□□ -0.68
CDH3-202ENST00000429102 CA5BP1Q8WTZ4 195 aa10.81□□□□□ -0.68
CDH3-202ENST00000429102 MEGF10Q96KG7 1140 aa10.81□□□□□ -0.68
CDH3-202ENST00000429102 Q96M66 194 aa10.81□□□□□ -0.68
CDH3-202ENST00000429102 SYT3Q9BQG1 590 aa10.81□□□□□ -0.68
CDH3-202ENST00000429102 PBDC1Q9BVG4 233 aa10.81□□□□□ -0.68
CDH3-202ENST00000429102 IGSF23A1L1A6 192 aa10.81□□□□□ -0.68
CDH3-202ENST00000429102 CXorf65A6NEN9 183 aa10.81□□□□□ -0.68
CDH3-202ENST00000429102 SOX15O60248 233 aa10.81□□□□□ -0.68
CDH3-202ENST00000429102 SCAF4O95104 1147 aaKnown RBP10.81□□□□□ -0.68
CDH3-202ENST00000429102 FABP4P15090 132 aa10.81□□□□□ -0.68
CDH3-202ENST00000429102 RPL23AP62750 156 aaKnown RBP10.81□□□□□ -0.68
CDH3-202ENST00000429102 ZXDAP98168 799 aa10.81□□□□□ -0.68
CDH3-202ENST00000429102 LIAT1Q6ZQX7 453 aa10.81□□□□□ -0.68
CDH3-202ENST00000429102 GAPTQ8N292 157 aa10.81□□□□□ -0.68
CDH3-202ENST00000429102 ZNF251Q9BRH9 671 aa10.81□□□□□ -0.68
CDH3-202ENST00000429102 CCL28Q9NRJ3 127 aa10.81□□□□□ -0.68
CDH3-202ENST00000429102 TIMM10BQ9Y5J6 103 aa10.81□□□□□ -0.68
CDH3-202ENST00000429102 POLEQ07864 2286 aa10.81□□□□□ -0.68
CDH3-202ENST00000429102 H3BQ15 152 aa10.81□□□□□ -0.68
CDH3-202ENST00000429102 DANCRP0C864 163 aa10.81□□□□□ -0.68
CDH3-202ENST00000429102 RNF224P0DH78 156 aa10.81□□□□□ -0.68
CDH3-202ENST00000429102 PRF1P14222 555 aa10.81□□□□□ -0.68
CDH3-202ENST00000429102 SPATA46Q5T0L3 261 aa10.81□□□□□ -0.68
CDH3-202ENST00000429102 TBC1D26Q86UD7 250 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms