RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 TSSC4Q9Y5U2 329 aaPredicted RBP13.19□□□□□ -0.3
VARS-216ENST00000428445 IGKV1-9A0A0C4DH69 117 aa13.18□□□□□ -0.3
VARS-216ENST00000428445 ALDOBP05062 364 aa13.18□□□□□ -0.3
VARS-216ENST00000428445 PRKACAP17612 351 aa13.18□□□□□ -0.3
VARS-216ENST00000428445 AZGP1P25311 298 aaKnown RBP13.18□□□□□ -0.3
VARS-216ENST00000428445 C18orf65Q6ZTR6 163 aa13.18□□□□□ -0.3
VARS-216ENST00000428445 FAM58AQ8N1B3 248 aa13.18□□□□□ -0.3
VARS-216ENST00000428445 CHST5Q9GZS9 411 aa13.18□□□□□ -0.3
VARS-216ENST00000428445 DPM3Q9P2X0 92 aa13.18□□□□□ -0.3
VARS-216ENST00000428445 GLS2Q9UI32 602 aa13.18□□□□□ -0.3
VARS-216ENST00000428445 ENTPD6O75354 484 aa13.17□□□□□ -0.3
VARS-216ENST00000428445 CDK2P24941 298 aa13.17□□□□□ -0.3
VARS-216ENST00000428445 ERP29P30040 261 aaKnown RBP13.17□□□□□ -0.3
VARS-216ENST00000428445 HTR1FP30939 366 aa13.17□□□□□ -0.3
VARS-216ENST00000428445 KIR3DL2P43630 455 aa13.17□□□□□ -0.3
VARS-216ENST00000428445 GLIPR1P48060 266 aa13.17□□□□□ -0.3
VARS-216ENST00000428445 RBP2P50120 134 aa13.17□□□□□ -0.3
VARS-216ENST00000428445 SLC35A2P78381 396 aa13.17□□□□□ -0.3
VARS-216ENST00000428445 AESQ08117 197 aa13.17□□□□□ -0.3
VARS-216ENST00000428445 ATP6AP1Q15904 470 aa13.17□□□□□ -0.3
VARS-216ENST00000428445 C16orf82Q7Z2V1 217 aa13.17□□□□□ -0.3
VARS-216ENST00000428445 KCTD20Q7Z5Y7 419 aa13.17□□□□□ -0.3
VARS-216ENST00000428445 ADAT3Q96EY9 351 aaPredicted RBP13.17□□□□□ -0.3
VARS-216ENST00000428445 ZNF286AQ9HBT8 521 aa13.17□□□□□ -0.3
VARS-216ENST00000428445 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.17□□□□□ -0.3
VARS-216ENST00000428445 GSTK1Q9Y2Q3 226 aa13.17□□□□□ -0.3
VARS-216ENST00000428445 IGKV1-12A0A0C4DH73 117 aa13.16□□□□□ -0.3
VARS-216ENST00000428445 FUOMA2VDF0 154 aa13.16□□□□□ -0.3
VARS-216ENST00000428445 MGST3O14880 152 aa13.16□□□□□ -0.3
VARS-216ENST00000428445 CYB5AP00167 134 aa13.16□□□□□ -0.3
VARS-216ENST00000428445 IGKV1D-12P01611 117 aa13.16□□□□□ -0.3
VARS-216ENST00000428445 CCDC159P0C7I6 412 aa13.16□□□□□ -0.3
VARS-216ENST00000428445 UBCP0CG48 685 aaKnown RBP13.16□□□□□ -0.3
VARS-216ENST00000428445 FASP25445 335 aa13.16□□□□□ -0.3
VARS-216ENST00000428445 POLR2IP36954 125 aaKnown RBP13.16□□□□□ -0.3
VARS-216ENST00000428445 ATP1B3P54709 279 aa13.16□□□□□ -0.3
VARS-216ENST00000428445 P2RX3P56373 397 aa13.16□□□□□ -0.3
VARS-216ENST00000428445 CDC42P60953 191 aa13.16□□□□□ -0.3
VARS-216ENST00000428445 SCN1BQ07699 218 aa13.16□□□□□ -0.3
VARS-216ENST00000428445 IL18R1Q13478 541 aa13.16□□□□□ -0.3
VARS-216ENST00000428445 ZNF146Q15072 292 aa13.16□□□□□ -0.3
VARS-216ENST00000428445 TP53I3Q53FA7 332 aa13.16□□□□□ -0.3
VARS-216ENST00000428445 OR52W1Q6IF63 320 aa13.16□□□□□ -0.3
VARS-216ENST00000428445 ZNF329Q86UD4 541 aa13.16□□□□□ -0.3
VARS-216ENST00000428445 OR10H4Q8NGA5 316 aa13.16□□□□□ -0.3
VARS-216ENST00000428445 OR8J1Q8NGP2 316 aa13.16□□□□□ -0.3
VARS-216ENST00000428445 RFKQ969G6 155 aa13.16□□□□□ -0.3
VARS-216ENST00000428445 RNF166Q96A37 237 aaPredicted RBP13.16□□□□□ -0.3
VARS-216ENST00000428445 RBM14Q96PK6 669 aaKnown RBP13.16□□□□□ -0.3
VARS-216ENST00000428445 SPACA5Q96QH8 159 aa13.16□□□□□ -0.3
VARS-216ENST00000428445 OSBPL10Q9BXB5 764 aa13.16□□□□□ -0.3
VARS-216ENST00000428445 GABARAPL1Q9H0R8 117 aa13.16□□□□□ -0.3
VARS-216ENST00000428445 LIN7BQ9HAP6 207 aa13.16□□□□□ -0.3
VARS-216ENST00000428445 RHOFQ9HBH0 211 aa13.16□□□□□ -0.3
VARS-216ENST00000428445 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.16□□□□□ -0.3
VARS-216ENST00000428445 HHLA2Q9UM44 414 aa13.16□□□□□ -0.3
VARS-216ENST00000428445 UBE2J1Q9Y385 318 aaPredicted RBP13.16□□□□□ -0.3
VARS-216ENST00000428445 LOC107986453A0A1B0GWG9 222 aa13.15□□□□□ -0.3
VARS-216ENST00000428445 OR2H2O95918 312 aa13.15□□□□□ -0.3
VARS-216ENST00000428445 IGLV1-47P01700 117 aa13.15□□□□□ -0.3
VARS-216ENST00000428445 IGHV3-7P01780 117 aa13.15□□□□□ -0.3
VARS-216ENST00000428445 ATP6V1E1P36543 226 aa13.15□□□□□ -0.3
VARS-216ENST00000428445 RASSF2P50749 326 aa13.15□□□□□ -0.3
VARS-216ENST00000428445 MTCP1P56278 107 aa13.15□□□□□ -0.3
VARS-216ENST00000428445 BDH1Q02338 343 aa13.15□□□□□ -0.3
VARS-216ENST00000428445 SPIN3Q5JUX0 258 aa13.15□□□□□ -0.3
VARS-216ENST00000428445 TMEM244Q5VVB8 128 aa13.15□□□□□ -0.3
VARS-216ENST00000428445 ETV3LQ6ZN32 361 aa13.15□□□□□ -0.3
VARS-216ENST00000428445 RTN4RL2Q86UN3 420 aa13.15□□□□□ -0.3
VARS-216ENST00000428445 LINC00482Q8N8I6 264 aa13.15□□□□□ -0.3
VARS-216ENST00000428445 OR4X2Q8NGF9 303 aa13.15□□□□□ -0.3
VARS-216ENST00000428445 CAPSLQ8WWF8 208 aa13.15□□□□□ -0.3
VARS-216ENST00000428445 TRUB1Q8WWH5 349 aaKnown RBP13.15□□□□□ -0.3
VARS-216ENST00000428445 FGGYQ96C11 551 aa13.15□□□□□ -0.3
VARS-216ENST00000428445 RCC1LQ96I51 464 aaKnown RBP13.15□□□□□ -0.3
VARS-216ENST00000428445 AKR1E2Q96JD6 320 aa13.15□□□□□ -0.3
VARS-216ENST00000428445 AP4S1Q9Y587 144 aa13.15□□□□□ -0.3
VARS-216ENST00000428445 TRBV2A0A0J9YWF9 115 aa13.14□□□□□ -0.31
VARS-216ENST00000428445 OR2F2O95006 317 aa13.14□□□□□ -0.31
VARS-216ENST00000428445 FCGR1AP12314 374 aa13.14□□□□□ -0.31
VARS-216ENST00000428445 ATF1P18846 271 aa13.14□□□□□ -0.31
VARS-216ENST00000428445 PRKACBP22694 351 aa13.14□□□□□ -0.31
VARS-216ENST00000428445 BRS3P32247 399 aa13.14□□□□□ -0.31
VARS-216ENST00000428445 OR3A4PP47883 348 aa13.14□□□□□ -0.31
VARS-216ENST00000428445 ARHGDIBP52566 201 aa13.14□□□□□ -0.31
VARS-216ENST00000428445 ZNF85Q03923 595 aa13.14□□□□□ -0.31
VARS-216ENST00000428445 RBM39Q14498 530 aaKnown RBP13.14□□□□□ -0.31
VARS-216ENST00000428445 KPNB1Q14974 876 aaKnown RBP13.14□□□□□ -0.31
VARS-216ENST00000428445 TPTE2P1Q5T6R2 138 aa13.14□□□□□ -0.31
VARS-216ENST00000428445 UTS2BQ765I0 119 aa13.14□□□□□ -0.31
VARS-216ENST00000428445 MRPL41Q8IXM3 137 aaKnown RBP13.14□□□□□ -0.31
VARS-216ENST00000428445 OR5D18Q8NGL1 313 aa13.14□□□□□ -0.31
VARS-216ENST00000428445 CORO2AQ92828 525 aa13.14□□□□□ -0.31
VARS-216ENST00000428445 CREB3L1Q96BA8 519 aa13.14□□□□□ -0.31
VARS-216ENST00000428445 NOL4LQ96MY1 436 aaPredicted RBP13.14□□□□□ -0.31
VARS-216ENST00000428445 ZNF649Q9BS31 505 aa13.14□□□□□ -0.31
VARS-216ENST00000428445 HMG20AQ9NP66 347 aa13.14□□□□□ -0.31
VARS-216ENST00000428445 LINC00527Q9UJ94 153 aa13.14□□□□□ -0.31
VARS-216ENST00000428445 GNG8Q9UK08 70 aa13.14□□□□□ -0.31
VARS-216ENST00000428445 TRGV10A0A0A0MS01 117 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms