RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 PRB2P02812 416 aaPredicted RBP13.94□□□□□ -0.18
DDR1-235ENST00000428153 MT-ND2P03891 347 aa13.94□□□□□ -0.18
DDR1-235ENST00000428153 OR3A1P47881 315 aa13.94□□□□□ -0.18
DDR1-235ENST00000428153 MTCP1P56278 107 aa13.94□□□□□ -0.18
DDR1-235ENST00000428153 PDZK1IP1Q13113 114 aa13.94□□□□□ -0.18
DDR1-235ENST00000428153 Q6ZS46 218 aa13.94□□□□□ -0.18
DDR1-235ENST00000428153 TRAPPC6BQ86SZ2 158 aa13.94□□□□□ -0.18
DDR1-235ENST00000428153 ABHD12Q8N2K0 398 aa13.94□□□□□ -0.18
DDR1-235ENST00000428153 TPRX1Q8N7U7 411 aa13.94□□□□□ -0.18
DDR1-235ENST00000428153 OR5AU1Q8NGC0 362 aa13.94□□□□□ -0.18
DDR1-235ENST00000428153 OR2G2Q8NGZ5 317 aa13.94□□□□□ -0.18
DDR1-235ENST00000428153 ADAT3Q96EY9 351 aaPredicted RBP13.94□□□□□ -0.18
DDR1-235ENST00000428153 MBOAT4Q96T53 435 aa13.94□□□□□ -0.18
DDR1-235ENST00000428153 COMMD4Q9H0A8 199 aa13.94□□□□□ -0.18
DDR1-235ENST00000428153 EXOSC4Q9NPD3 245 aaKnown RBP13.94□□□□□ -0.18
DDR1-235ENST00000428153 AURKAIP1Q9NWT8 199 aaPredicted RBP13.94□□□□□ -0.18
DDR1-235ENST00000428153 IL36RNQ9UBH0 155 aa13.94□□□□□ -0.18
DDR1-235ENST00000428153 AP4S1Q9Y587 144 aa13.94□□□□□ -0.18
DDR1-235ENST00000428153 LEUTXA8MZ59 168 aa13.93□□□□□ -0.18
DDR1-235ENST00000428153 PRKACAP17612 351 aa13.93□□□□□ -0.18
DDR1-235ENST00000428153 ATF1P18846 271 aa13.93□□□□□ -0.18
DDR1-235ENST00000428153 CD33P20138 364 aa13.93□□□□□ -0.18
DDR1-235ENST00000428153 BCL3P20749 454 aa13.93□□□□□ -0.18
DDR1-235ENST00000428153 KIR3DL2P43630 455 aa13.93□□□□□ -0.18
DDR1-235ENST00000428153 POU3F4P49335 361 aa13.93□□□□□ -0.18
DDR1-235ENST00000428153 RASSF2P50749 326 aa13.93□□□□□ -0.18
DDR1-235ENST00000428153 CCR9P51686 369 aa13.93□□□□□ -0.18
DDR1-235ENST00000428153 ZNF85Q03923 595 aa13.93□□□□□ -0.18
DDR1-235ENST00000428153 CHST4Q8NCG5 386 aa13.93□□□□□ -0.18
DDR1-235ENST00000428153 BCAS4Q8TDM0 211 aa13.93□□□□□ -0.18
DDR1-235ENST00000428153 CAPSLQ8WWF8 208 aa13.93□□□□□ -0.18
DDR1-235ENST00000428153 RNF166Q96A37 237 aaPredicted RBP13.93□□□□□ -0.18
DDR1-235ENST00000428153 EME1Q96AY2 570 aa13.93□□□□□ -0.18
DDR1-235ENST00000428153 OPALINQ96PE5 141 aa13.93□□□□□ -0.18
DDR1-235ENST00000428153 OR5M11Q96RB7 305 aa13.93□□□□□ -0.18
DDR1-235ENST00000428153 NEK6Q9HC98 313 aa13.93□□□□□ -0.18
DDR1-235ENST00000428153 GNG8Q9UK08 70 aa13.93□□□□□ -0.18
DDR1-235ENST00000428153 TSSC4Q9Y5U2 329 aaPredicted RBP13.93□□□□□ -0.18
DDR1-235ENST00000428153 A0A087X0M5 115 aa13.92□□□□□ -0.18
DDR1-235ENST00000428153 A0A1B0GX30 115 aa13.92□□□□□ -0.18
DDR1-235ENST00000428153 OOSP1A8MZH6 123 aa13.92□□□□□ -0.18
DDR1-235ENST00000428153 H3BSH0 61 aa13.92□□□□□ -0.18
DDR1-235ENST00000428153 M0QZK8 103 aa13.92□□□□□ -0.18
DDR1-235ENST00000428153 MMP23AO75900 390 aa13.92□□□□□ -0.18
DDR1-235ENST00000428153 KDM4BO94953 1096 aa13.92□□□□□ -0.18
DDR1-235ENST00000428153 OR2F2O95006 317 aa13.92□□□□□ -0.18
DDR1-235ENST00000428153 INMTO95050 263 aa13.92□□□□□ -0.18
DDR1-235ENST00000428153 DUS4LO95620 317 aaKnown RBP13.92□□□□□ -0.18
DDR1-235ENST00000428153 RPSAP08865 295 aaKnown RBP13.92□□□□□ -0.18
DDR1-235ENST00000428153 CEACAM3P40198 252 aa13.92□□□□□ -0.18
DDR1-235ENST00000428153 KIAA2026Q5HYC2 2103 aa13.92□□□□□ -0.18
DDR1-235ENST00000428153 SLC25A30Q5SVS4 291 aa13.92□□□□□ -0.18
DDR1-235ENST00000428153 FOXB2Q5VYV0 432 aa13.92□□□□□ -0.18
DDR1-235ENST00000428153 CCDC144NLQ6NUI1 221 aa13.92□□□□□ -0.18
DDR1-235ENST00000428153 SAXO1Q8IYX7 474 aa13.92□□□□□ -0.18
DDR1-235ENST00000428153 RBM14Q96PK6 669 aaKnown RBP13.92□□□□□ -0.18
DDR1-235ENST00000428153 APOL3O95236 402 aa13.91□□□□□ -0.18
DDR1-235ENST00000428153 OR2H2O95918 312 aa13.91□□□□□ -0.18
DDR1-235ENST00000428153 PF4V1P10720 104 aa13.91□□□□□ -0.18
DDR1-235ENST00000428153 ZNF20P17024 532 aa13.91□□□□□ -0.18
DDR1-235ENST00000428153 JUNBP17275 347 aaPredicted RBP13.91□□□□□ -0.18
DDR1-235ENST00000428153 CDK2P24941 298 aa13.91□□□□□ -0.18
DDR1-235ENST00000428153 DUSP1P28562 367 aa13.91□□□□□ -0.18
DDR1-235ENST00000428153 POLR2IP36954 125 aaKnown RBP13.91□□□□□ -0.18
DDR1-235ENST00000428153 SLC35A2P78381 396 aa13.91□□□□□ -0.18
DDR1-235ENST00000428153 BNIP1Q12981 228 aa13.91□□□□□ -0.18
DDR1-235ENST00000428153 TMEM95Q3KNT9 176 aa13.91□□□□□ -0.18
DDR1-235ENST00000428153 CENPVQ7Z7K6 275 aaPredicted RBP13.91□□□□□ -0.18
DDR1-235ENST00000428153 RDH10Q8IZV5 341 aa13.91□□□□□ -0.18
DDR1-235ENST00000428153 OR4X2Q8NGF9 303 aa13.91□□□□□ -0.18
DDR1-235ENST00000428153 STMN2Q93045 179 aa13.91□□□□□ -0.18
DDR1-235ENST00000428153 FGGYQ96C11 551 aa13.91□□□□□ -0.18
DDR1-235ENST00000428153 CENPNQ96H22 339 aaPredicted RBP13.91□□□□□ -0.18
DDR1-235ENST00000428153 RCC1LQ96I51 464 aaKnown RBP13.91□□□□□ -0.18
DDR1-235ENST00000428153 MYCBPQ99417 103 aaPredicted RBP13.91□□□□□ -0.18
DDR1-235ENST00000428153 FRRS1LQ9P0K9 344 aa13.91□□□□□ -0.18
DDR1-235ENST00000428153 HHLA2Q9UM44 414 aa13.91□□□□□ -0.18
DDR1-235ENST00000428153 GSTK1Q9Y2Q3 226 aa13.91□□□□□ -0.18
DDR1-235ENST00000428153 COL7A1Q02388 2944 aa13.91□□□□□ -0.18
DDR1-235ENST00000428153 J3QRE1 110 aa13.9□□□□□ -0.18
DDR1-235ENST00000428153 SLC16A6O15403 523 aa13.9□□□□□ -0.18
DDR1-235ENST00000428153 HLA-DRB5Q30154 266 aa13.9□□□□□ -0.18
DDR1-235ENST00000428153 TP53I3Q53FA7 332 aa13.9□□□□□ -0.18
DDR1-235ENST00000428153 AMIGO2Q86SJ2 522 aa13.9□□□□□ -0.18
DDR1-235ENST00000428153 SLC25A33Q9BSK2 321 aa13.9□□□□□ -0.18
DDR1-235ENST00000428153 PCDHB16Q9NRJ7 776 aa13.9□□□□□ -0.18
DDR1-235ENST00000428153 IGKV1-12A0A0C4DH73 117 aa13.89□□□□□ -0.19
DDR1-235ENST00000428153 TCRBV4S1A1TA0A5B7 111 aa13.89□□□□□ -0.19
DDR1-235ENST00000428153 ODAMA1E959 279 aa13.89□□□□□ -0.19
DDR1-235ENST00000428153 BUB1B-PAK6H3BSN5 160 aa13.89□□□□□ -0.19
DDR1-235ENST00000428153 SIRPB1O00241 398 aa13.89□□□□□ -0.19
DDR1-235ENST00000428153 CLIC3O95833 236 aa13.89□□□□□ -0.19
DDR1-235ENST00000428153 IGKV1D-12P01611 117 aa13.89□□□□□ -0.19
DDR1-235ENST00000428153 OCM2P0CE71 109 aa13.89□□□□□ -0.19
DDR1-235ENST00000428153 OCMP0CE72 109 aaPredicted RBP13.89□□□□□ -0.19
DDR1-235ENST00000428153 MNDAP41218 407 aa13.89□□□□□ -0.19
DDR1-235ENST00000428153 PTGFRP43088 359 aa13.89□□□□□ -0.19
DDR1-235ENST00000428153 PRRX1P54821 245 aa13.89□□□□□ -0.19
DDR1-235ENST00000428153 KPNB1Q14974 876 aaKnown RBP13.89□□□□□ -0.19
DDR1-235ENST00000428153 TCTEX1D4Q5JR98 221 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms