RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 SCGB3A2Q96PL1 93 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 KCNS3Q9BQ31 491 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 SCRT1Q9BWW7 348 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 ZNF717Q9BY31 904 aaPredicted RBP1.37□□□□□ -2.19
PTPRC-208ENST00000427110 TOLLIPQ9H0E2 274 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 CENPHQ9H3R5 247 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 TRABDQ9H4I3 376 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 C8orf33Q9H7E9 229 aaPredicted RBP1.37□□□□□ -2.19
PTPRC-208ENST00000427110 SAR1AQ9NR31 198 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 RHBDL2Q9NX52 303 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 NKIRAS1Q9NYS0 192 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 ADA2Q9NZK5 511 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 ARL2BPQ9Y2Y0 163 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 CBY1Q9Y3M2 126 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 USH1CQ9Y6N9 552 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 KIAA1671Q9BY89 1806 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 TRIOBPQ9H2D6 2365 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 OBSL1O75147 1896 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 ZNF106Q9H2Y7 1883 aaKnown RBP1.37□□□□□ -2.19
PTPRC-208ENST00000427110 CLUHO75153 1309 aa1.37□□□□□ -2.19
PTPRC-208ENST00000427110 ANKRD12Q6UB98 2062 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 PIKFYVEQ9Y2I7 2098 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 EXOC1LA0A1B0GW35 172 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 FAM159BA6NKW6 160 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 HACD1B0YJ81 288 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 H0YIV9 168 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 M0R1X1 148 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 TNFRSF11BO00300 401 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 PIRO00625 290 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 TAAR5O14804 337 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 BIRC5O15392 142 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 AKR7A2O43488 359 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 PLIN3O60664 434 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 DCTN3O75935 186 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 FARS2O95363 451 aaKnown RBP1.36□□□□□ -2.19
PTPRC-208ENST00000427110 ATP6V1G2O95670 118 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 SNAI1O95863 264 aaPredicted RBP1.36□□□□□ -2.19
PTPRC-208ENST00000427110 PTHP01270 115 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 CATP04040 527 aaKnown RBP1.36□□□□□ -2.19
PTPRC-208ENST00000427110 DCNP07585 359 aaKnown RBP1.36□□□□□ -2.19
PTPRC-208ENST00000427110 CXCL8P10145 99 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 KCNE1P15382 129 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 NQO1P15559 274 aaKnown RBP1.36□□□□□ -2.19
PTPRC-208ENST00000427110 GABRG2P18507 467 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 PMCHP20382 165 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 PSMB5P28074 263 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 MIPP30301 263 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 ALDH3A1P30838 453 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 SDC4P31431 198 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 CD70P32970 193 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 RPA3P35244 121 aaPredicted RBP1.36□□□□□ -2.19
PTPRC-208ENST00000427110 APLNRP35414 380 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 MYCNOSP40205 109 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 SLCO1A2P46721 670 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 PRLHRP49683 370 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 SERPINB9P50453 376 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 BCAP31P51572 246 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 UBE2E1P51965 193 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 RAB11AP62491 216 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 TFAMQ00059 246 aaKnown RBP1.36□□□□□ -2.19
PTPRC-208ENST00000427110 ZNF616Q08AN1 781 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 NAB1Q13506 487 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 PAFAH1B3Q15102 231 aaKnown RBP1.36□□□□□ -2.19
PTPRC-208ENST00000427110 TRIP13Q15645 432 aaPredicted RBP1.36□□□□□ -2.19
PTPRC-208ENST00000427110 TSC22D1Q15714 1073 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 RAB11BQ15907 218 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 SNCBQ16143 134 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 RPEL1Q2QD12 228 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 STEAP4Q687X5 459 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 H3F3CQ6NXT2 135 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 GUSBP11Q6P575 273 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 CD300LGQ6UXG3 332 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 WDR82Q6UXN9 313 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 UNQ9165/PRO28630Q6UXU0 137 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 Q6ZSR6 202 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 C3orf62Q6ZUJ4 267 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 FAM122BQ7Z309 247 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 RAB43Q86YS6 212 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 SLC30A8Q8IWU4 369 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 CMTM8Q8IZV2 173 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 LYPD1Q8N2G4 141 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 GATSQ8NAP1 163 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 FBXO36Q8NEA4 188 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 PROKR2Q8NFJ6 384 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 OR5T1Q8NG75 326 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 OR10W1Q8NGF6 305 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 PPTC7Q8NI37 304 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 ITFG1Q8TB96 612 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 TCP10LQ8TDR4 215 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 DCAKDQ8WVC6 231 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 C10orf82Q8WW14 230 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 DYDC1Q8WWB3 177 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 ASZ1Q8WWH4 475 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 RXFP2Q8WXD0 754 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 ZNF75CPQ92670 426 aaPredicted RBP1.36□□□□□ -2.19
PTPRC-208ENST00000427110 ISOC2Q96AB3 205 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 RCN3Q96D15 328 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 CERS2Q96G23 380 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 OLFM3Q96PB7 478 aa1.36□□□□□ -2.19
PTPRC-208ENST00000427110 OR4K3Q96R72 315 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms