RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 GINS3Q9BRX5 216 aa11.73□□□□□ -0.53
LRCH3-203ENST00000425562 NIPSNAP3BQ9BS92 247 aa11.73□□□□□ -0.53
LRCH3-203ENST00000425562 OPA3Q9H6K4 179 aa11.73□□□□□ -0.53
LRCH3-203ENST00000425562 FGF21Q9NSA1 209 aa11.73□□□□□ -0.53
LRCH3-203ENST00000425562 LILRA5A6NI73 299 aa11.73□□□□□ -0.53
LRCH3-203ENST00000425562 K7N7A8 449 aa11.73□□□□□ -0.53
LRCH3-203ENST00000425562 HMGB3O15347 200 aaKnown RBP11.73□□□□□ -0.53
LRCH3-203ENST00000425562 CD55P08174 381 aa11.73□□□□□ -0.53
LRCH3-203ENST00000425562 PATE4P0C8F1 98 aa11.73□□□□□ -0.53
LRCH3-203ENST00000425562 TMEM187Q14656 261 aa11.73□□□□□ -0.53
LRCH3-203ENST00000425562 GNMTQ14749 295 aa11.73□□□□□ -0.53
LRCH3-203ENST00000425562 SPSB3Q6PJ21 355 aa11.73□□□□□ -0.53
LRCH3-203ENST00000425562 CRIP3Q6Q6R5 217 aa11.73□□□□□ -0.53
LRCH3-203ENST00000425562 DEGS2Q6QHC5 323 aa11.73□□□□□ -0.53
LRCH3-203ENST00000425562 UEVLDQ8IX04 471 aa11.73□□□□□ -0.53
LRCH3-203ENST00000425562 YPEL4Q96NS1 127 aa11.73□□□□□ -0.53
LRCH3-203ENST00000425562 NAA60Q9H7X0 242 aa11.73□□□□□ -0.53
LRCH3-203ENST00000425562 B3GAT1Q9P2W7 334 aa11.73□□□□□ -0.53
LRCH3-203ENST00000425562 MMACHCQ9Y4U1 282 aa11.73□□□□□ -0.53
LRCH3-203ENST00000425562 TRIOBPQ9H2D6 2365 aa11.73□□□□□ -0.53
LRCH3-203ENST00000425562 COL4A2P08572 1712 aa11.73□□□□□ -0.53
LRCH3-203ENST00000425562 TSTD3H0UI37 97 aa11.73□□□□□ -0.53
LRCH3-203ENST00000425562 PMELP40967 661 aa11.73□□□□□ -0.53
LRCH3-203ENST00000425562 RNF4P78317 190 aa11.73□□□□□ -0.53
LRCH3-203ENST00000425562 ZNF154Q13106 437 aa11.73□□□□□ -0.53
LRCH3-203ENST00000425562 MALSU1Q96EH3 234 aa11.73□□□□□ -0.53
LRCH3-203ENST00000425562 LURAP1Q96LR2 239 aa11.73□□□□□ -0.53
LRCH3-203ENST00000425562 DOCK7Q96N67 2140 aa11.73□□□□□ -0.53
LRCH3-203ENST00000425562 IGHV1OR21-1A0A087WYE8 117 aa11.72□□□□□ -0.53
LRCH3-203ENST00000425562 VSTM2BA6NLU5 285 aa11.72□□□□□ -0.53
LRCH3-203ENST00000425562 OR2J2O76002 312 aa11.72□□□□□ -0.53
LRCH3-203ENST00000425562 TIAF1O95411 115 aa11.72□□□□□ -0.53
LRCH3-203ENST00000425562 CTSDP07339 412 aaPredicted RBP11.72□□□□□ -0.53
LRCH3-203ENST00000425562 SRP19P09132 144 aaKnown RBP11.72□□□□□ -0.53
LRCH3-203ENST00000425562 IL2RGP31785 369 aa11.72□□□□□ -0.53
LRCH3-203ENST00000425562 RAB1AP62820 205 aa11.72□□□□□ -0.53
LRCH3-203ENST00000425562 COL13A1Q5TAT6 717 aaPredicted RBP11.72□□□□□ -0.53
LRCH3-203ENST00000425562 HIST2H3PS2Q5TEC6 136 aa11.72□□□□□ -0.53
LRCH3-203ENST00000425562 SLC25A24Q6NUK1 477 aa11.72□□□□□ -0.53
LRCH3-203ENST00000425562 DPPA2Q7Z7J5 298 aa11.72□□□□□ -0.53
LRCH3-203ENST00000425562 OR5T1Q8NG75 326 aa11.72□□□□□ -0.53
LRCH3-203ENST00000425562 MVB12AQ96EY5 273 aa11.72□□□□□ -0.53
LRCH3-203ENST00000425562 FAM210BQ96KR6 192 aa11.72□□□□□ -0.53
LRCH3-203ENST00000425562 CPAMD8Q8IZJ3 1885 aa11.72□□□□□ -0.53
LRCH3-203ENST00000425562 A0A1W2PR77 199 aa11.72□□□□□ -0.53
LRCH3-203ENST00000425562 SLC31A2O15432 143 aa11.72□□□□□ -0.53
LRCH3-203ENST00000425562 GLRX2Q9NS18 164 aa11.72□□□□□ -0.53
LRCH3-203ENST00000425562 PPP4R1LQ9P1A2 415 aa11.72□□□□□ -0.53
LRCH3-203ENST00000425562 FOXD3Q9UJU5 478 aaPredicted RBP11.72□□□□□ -0.53
LRCH3-203ENST00000425562 SMCO3A2RU48 225 aa11.71□□□□□ -0.53
LRCH3-203ENST00000425562 G3V3Y1 287 aa11.71□□□□□ -0.53
LRCH3-203ENST00000425562 PI4KAP42356 2102 aa11.71□□□□□ -0.53
LRCH3-203ENST00000425562 DYNLT3P51808 116 aa11.71□□□□□ -0.53
LRCH3-203ENST00000425562 SSTP61278 116 aa11.71□□□□□ -0.53
LRCH3-203ENST00000425562 ICAM4Q14773 271 aa11.71□□□□□ -0.53
LRCH3-203ENST00000425562 OR8G1Q15617 311 aa11.71□□□□□ -0.53
LRCH3-203ENST00000425562 PRAMEF20Q5VT98 475 aa11.71□□□□□ -0.53
LRCH3-203ENST00000425562 STX12Q86Y82 276 aa11.71□□□□□ -0.53
LRCH3-203ENST00000425562 OR2C3Q8N628 320 aa11.71□□□□□ -0.53
LRCH3-203ENST00000425562 RBM24Q9BX46 236 aaKnown RBP11.71□□□□□ -0.53
LRCH3-203ENST00000425562 PLA2G3Q9NZ20 509 aa11.71□□□□□ -0.53
LRCH3-203ENST00000425562 GAB2Q9UQC2 676 aa11.71□□□□□ -0.53
LRCH3-203ENST00000425562 CHD3Q12873 2000 aaKnown RBP11.71□□□□□ -0.53
LRCH3-203ENST00000425562 ZNF43P17038 809 aa11.71□□□□□ -0.54
LRCH3-203ENST00000425562 CD27P26842 260 aa11.71□□□□□ -0.54
LRCH3-203ENST00000425562 DUSP1P28562 367 aa11.71□□□□□ -0.54
LRCH3-203ENST00000425562 CLDN17P56750 224 aa11.71□□□□□ -0.54
LRCH3-203ENST00000425562 HIKESHIQ53FT3 197 aa11.71□□□□□ -0.54
LRCH3-203ENST00000425562 REC114Q7Z4M0 266 aa11.71□□□□□ -0.54
LRCH3-203ENST00000425562 OR14L1PQ8NHC6 308 aa11.71□□□□□ -0.54
LRCH3-203ENST00000425562 TMEM234Q8WY98 164 aa11.71□□□□□ -0.54
LRCH3-203ENST00000425562 HIST1H2BLQ99880 126 aa11.71□□□□□ -0.54
LRCH3-203ENST00000425562 ANAPC10Q9UM13 185 aa11.71□□□□□ -0.54
LRCH3-203ENST00000425562 DOCK11Q5JSL3 2073 aa11.71□□□□□ -0.54
LRCH3-203ENST00000425562 LIPT2A6NK58 231 aa11.7□□□□□ -0.54
LRCH3-203ENST00000425562 LMO7DNF2Z398 122 aa11.7□□□□□ -0.54
LRCH3-203ENST00000425562 TERTO14746 1132 aaKnown RBP11.7□□□□□ -0.54
LRCH3-203ENST00000425562 GDF9O60383 454 aa11.7□□□□□ -0.54
LRCH3-203ENST00000425562 IGHG1P01857 330 aa11.7□□□□□ -0.54
LRCH3-203ENST00000425562 SNAI3Q3KNW1 292 aa11.7□□□□□ -0.54
LRCH3-203ENST00000425562 DOK3Q7L591 496 aa11.7□□□□□ -0.54
LRCH3-203ENST00000425562 LGI3Q8N145 548 aa11.7□□□□□ -0.54
LRCH3-203ENST00000425562 RHBDD1Q8TEB9 315 aa11.7□□□□□ -0.54
LRCH3-203ENST00000425562 FSCN3Q9NQT6 498 aa11.7□□□□□ -0.54
LRCH3-203ENST00000425562 P4HTMQ9NXG6 502 aa11.7□□□□□ -0.54
LRCH3-203ENST00000425562 ADAMTS9Q9P2N4 1935 aa11.7□□□□□ -0.54
LRCH3-203ENST00000425562 TNRC18O15417 2968 aaPredicted RBP11.7□□□□□ -0.54
LRCH3-203ENST00000425562 IGHMP01871 453 aa11.7□□□□□ -0.54
LRCH3-203ENST00000425562 NR2C1P13056 603 aa11.7□□□□□ -0.54
LRCH3-203ENST00000425562 GALNSP34059 522 aa11.7□□□□□ -0.54
LRCH3-203ENST00000425562 HNRNPKP61978 463 aaKnown RBP eCLIP11.7□□□□□ -0.547e-14■■■■□ 24.3
LRCH3-203ENST00000425562 PRSS8Q16651 343 aa11.7□□□□□ -0.54
LRCH3-203ENST00000425562 PLPP5Q8NEB5 264 aa11.7□□□□□ -0.54
LRCH3-203ENST00000425562 ZNF837Q96EG3 531 aaPredicted RBP11.7□□□□□ -0.54
LRCH3-203ENST00000425562 TVP23CQ96ET8 276 aa11.7□□□□□ -0.54
LRCH3-203ENST00000425562 BOD1Q96IK1 185 aa11.7□□□□□ -0.54
LRCH3-203ENST00000425562 ZNF665Q9H7R5 613 aa11.7□□□□□ -0.54
LRCH3-203ENST00000425562 CALHM2Q9HA72 323 aa11.7□□□□□ -0.54
LRCH3-203ENST00000425562 TRBV11-1A0A0K0K1C0 115 aa11.7□□□□□ -0.54
LRCH3-203ENST00000425562 A0A1B0GX78 115 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms