RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 OR5R1Q8NH85 324 aa10.35□□□□□ -0.75
SGCE-203ENST00000425444 PPP1R35Q8TAP8 253 aa10.35□□□□□ -0.75
SGCE-203ENST00000425444 CNIH3Q8TBE1 160 aa10.35□□□□□ -0.75
SGCE-203ENST00000425444 EXOSC4Q9NPD3 245 aaKnown RBP10.35□□□□□ -0.75
SGCE-203ENST00000425444 MRPS18AQ9NVS2 196 aaKnown RBP10.35□□□□□ -0.75
SGCE-203ENST00000425444 GSTK1Q9Y2Q3 226 aa10.35□□□□□ -0.75
SGCE-203ENST00000425444 RYR2Q92736 4967 aa10.34□□□□□ -0.75
SGCE-203ENST00000425444 hADV38S2A0JD32 116 aa10.34□□□□□ -0.75
SGCE-203ENST00000425444 TMEM82A0PJX8 343 aa10.34□□□□□ -0.75
SGCE-203ENST00000425444 SIRPB1O00241 398 aa10.34□□□□□ -0.75
SGCE-203ENST00000425444 MAGEB3O15480 346 aa10.34□□□□□ -0.75
SGCE-203ENST00000425444 MT-ND2P03891 347 aa10.34□□□□□ -0.75
SGCE-203ENST00000425444 CSF1P09603 554 aa10.34□□□□□ -0.75
SGCE-203ENST00000425444 LIMS3P0CW19 117 aa10.34□□□□□ -0.75
SGCE-203ENST00000425444 LIMS4P0CW20 117 aa10.34□□□□□ -0.75
SGCE-203ENST00000425444 DCKP27707 260 aa10.34□□□□□ -0.75
SGCE-203ENST00000425444 SOX2P48431 317 aa10.34□□□□□ -0.75
SGCE-203ENST00000425444 BMXP51813 675 aa10.34□□□□□ -0.75
SGCE-203ENST00000425444 GTF2A1P52655 376 aaPredicted RBP10.34□□□□□ -0.75
SGCE-203ENST00000425444 MED21Q13503 144 aa10.34□□□□□ -0.75
SGCE-203ENST00000425444 TMPRSS11AQ6ZMR5 421 aa10.34□□□□□ -0.75
SGCE-203ENST00000425444 DHRSXQ8N5I4 330 aa10.34□□□□□ -0.75
SGCE-203ENST00000425444 BEND2Q8NDZ0 799 aa10.34□□□□□ -0.75
SGCE-203ENST00000425444 OR13D1Q8NGV5 346 aa10.34□□□□□ -0.75
SGCE-203ENST00000425444 C17orf50Q8WW18 174 aa10.34□□□□□ -0.75
SGCE-203ENST00000425444 CPNE2Q96FN4 548 aaPredicted RBP10.34□□□□□ -0.75
SGCE-203ENST00000425444 ZNF714Q96N38 554 aa10.34□□□□□ -0.75
SGCE-203ENST00000425444 ZNF649Q9BS31 505 aa10.34□□□□□ -0.75
SGCE-203ENST00000425444 FGF20Q9NP95 211 aaPredicted RBP10.34□□□□□ -0.75
SGCE-203ENST00000425444 CHCHD3Q9NX63 227 aaKnown RBP10.34□□□□□ -0.75
SGCE-203ENST00000425444 H3BUX3 64 aa10.33□□□□□ -0.76
SGCE-203ENST00000425444 SH2D1BO14796 132 aa10.33□□□□□ -0.76
SGCE-203ENST00000425444 CLPXO76031 633 aa10.33□□□□□ -0.76
SGCE-203ENST00000425444 CD2P06729 351 aa10.33□□□□□ -0.76
SGCE-203ENST00000425444 ZNF728P0DKX0 622 aa10.33□□□□□ -0.76
SGCE-203ENST00000425444 TMEM225BP0DP42 221 aa10.33□□□□□ -0.76
SGCE-203ENST00000425444 ZNF44P15621 663 aa10.33□□□□□ -0.76
SGCE-203ENST00000425444 RAB3AP20336 220 aa10.33□□□□□ -0.76
SGCE-203ENST00000425444 ETV1P50549 477 aa10.33□□□□□ -0.76
SGCE-203ENST00000425444 MEF2CQ06413 473 aaPredicted RBP10.33□□□□□ -0.76
SGCE-203ENST00000425444 ZNF146Q15072 292 aa10.33□□□□□ -0.76
SGCE-203ENST00000425444 CDK5R1Q15078 307 aa10.33□□□□□ -0.76
SGCE-203ENST00000425444 LRRC75BQ2VPJ9 315 aa10.33□□□□□ -0.76
SGCE-203ENST00000425444 C11orf87Q6NUJ2 197 aa10.33□□□□□ -0.76
SGCE-203ENST00000425444 TRAPPC6BQ86SZ2 158 aa10.33□□□□□ -0.76
SGCE-203ENST00000425444 TPRX1Q8N7U7 411 aa10.33□□□□□ -0.76
SGCE-203ENST00000425444 OR52N4Q8NGI2 321 aa10.33□□□□□ -0.76
SGCE-203ENST00000425444 GPER1Q99527 375 aa10.33□□□□□ -0.76
SGCE-203ENST00000425444 SSX3Q99909 188 aa10.33□□□□□ -0.76
SGCE-203ENST00000425444 JAM3Q9BX67 310 aa10.33□□□□□ -0.76
SGCE-203ENST00000425444 FAM192AQ9GZU8 254 aa10.33□□□□□ -0.76
SGCE-203ENST00000425444 HMG20AQ9NP66 347 aa10.33□□□□□ -0.76
SGCE-203ENST00000425444 EXOSC1Q9Y3B2 195 aaKnown RBP10.33□□□□□ -0.76
SGCE-203ENST00000425444 TET2Q6N021 2002 aaPredicted RBP10.33□□□□□ -0.76
SGCE-203ENST00000425444 TENM2Q9NT68 2774 aa10.32□□□□□ -0.76
SGCE-203ENST00000425444 IGKV1-12A0A0C4DH73 117 aa10.32□□□□□ -0.76
SGCE-203ENST00000425444 C17orf98A8MV24 154 aa10.32□□□□□ -0.76
SGCE-203ENST00000425444 ANKRD65E5RJM6 399 aa10.32□□□□□ -0.76
SGCE-203ENST00000425444 MGST3O14880 152 aa10.32□□□□□ -0.76
SGCE-203ENST00000425444 PSPNO60542 156 aa10.32□□□□□ -0.76
SGCE-203ENST00000425444 KDM4BO94953 1096 aa10.32□□□□□ -0.76
SGCE-203ENST00000425444 IGKV1D-12P01611 117 aa10.32□□□□□ -0.76
SGCE-203ENST00000425444 RBP4P02753 201 aa10.32□□□□□ -0.76
SGCE-203ENST00000425444 ARG1P05089 322 aa10.32□□□□□ -0.76
SGCE-203ENST00000425444 IGHV1-8P0DP01 117 aa10.32□□□□□ -0.76
SGCE-203ENST00000425444 PAX6P26367 422 aa10.32□□□□□ -0.76
SGCE-203ENST00000425444 OR3A1P47881 315 aa10.32□□□□□ -0.76
SGCE-203ENST00000425444 SCN1BQ07699 218 aa10.32□□□□□ -0.76
SGCE-203ENST00000425444 DYNC1I2Q13409 638 aaKnown RBP10.32□□□□□ -0.76
SGCE-203ENST00000425444 IL18R1Q13478 541 aa10.32□□□□□ -0.76
SGCE-203ENST00000425444 KISS1Q15726 138 aa10.32□□□□□ -0.76
SGCE-203ENST00000425444 LY6EQ16553 131 aa10.32□□□□□ -0.76
SGCE-203ENST00000425444 CCDC58Q4VC31 144 aa10.32□□□□□ -0.76
SGCE-203ENST00000425444 OR2G6Q5TZ20 316 aa10.32□□□□□ -0.76
SGCE-203ENST00000425444 RPL22L1Q6P5R6 122 aaKnown RBP10.32□□□□□ -0.76
SGCE-203ENST00000425444 RNF144BQ7Z419 303 aa10.32□□□□□ -0.76
SGCE-203ENST00000425444 SAXO1Q8IYX7 474 aa10.32□□□□□ -0.76
SGCE-203ENST00000425444 C11orf42Q8N5U0 333 aa10.32□□□□□ -0.76
SGCE-203ENST00000425444 PARP16Q8N5Y8 322 aa10.32□□□□□ -0.76
SGCE-203ENST00000425444 OR4S1Q8NGB4 309 aa10.32□□□□□ -0.76
SGCE-203ENST00000425444 LINC01006Q8NI28 216 aa10.32□□□□□ -0.76
SGCE-203ENST00000425444 GPR148Q8TDV2 347 aa10.32□□□□□ -0.76
SGCE-203ENST00000425444 TMEM80Q96HE8 168 aa10.32□□□□□ -0.76
SGCE-203ENST00000425444 PPA2Q9H2U2 334 aa10.32□□□□□ -0.76
SGCE-203ENST00000425444 VCXQ9H320 206 aa10.32□□□□□ -0.76
SGCE-203ENST00000425444 RHOFQ9HBH0 211 aa10.32□□□□□ -0.76
SGCE-203ENST00000425444 TAS2R4Q9NYW5 299 aa10.32□□□□□ -0.76
SGCE-203ENST00000425444 DIMT1Q9UNQ2 313 aaKnown RBP10.32□□□□□ -0.76
SGCE-203ENST00000425444 LINC00312Q9Y6C7 94 aa10.32□□□□□ -0.76
SGCE-203ENST00000425444 FUOMA2VDF0 154 aa10.31□□□□□ -0.76
SGCE-203ENST00000425444 OR2H2O95918 312 aa10.31□□□□□ -0.76
SGCE-203ENST00000425444 OPN1MWP04001 364 aa10.31□□□□□ -0.76
SGCE-203ENST00000425444 OPN1MW2P0DN77 364 aa10.31□□□□□ -0.76
SGCE-203ENST00000425444 OPN1MW3P0DN78 364 aa10.31□□□□□ -0.76
SGCE-203ENST00000425444 TGFBR2P37173 567 aa10.31□□□□□ -0.76
SGCE-203ENST00000425444 CAPGP40121 348 aa10.31□□□□□ -0.76
SGCE-203ENST00000425444 DLX6P56179 175 aa10.31□□□□□ -0.76
SGCE-203ENST00000425444 P2RX3P56373 397 aa10.31□□□□□ -0.76
SGCE-203ENST00000425444 PROK1P58294 105 aa10.31□□□□□ -0.76
SGCE-203ENST00000425444 PLA1AQ53H76 456 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms