RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 OR1S2Q8NGQ3 325 aa9.95□□□□□ -0.82
UBR4-207ENST00000425413 RTN4IP1Q8WWV3 396 aaPredicted RBP9.95□□□□□ -0.82
UBR4-207ENST00000425413 EXTL1Q92935 676 aa9.95□□□□□ -0.82
UBR4-207ENST00000425413 CELA3BP08861 270 aa9.94□□□□□ -0.82
UBR4-207ENST00000425413 FUT3P21217 361 aa9.94□□□□□ -0.82
UBR4-207ENST00000425413 CLN3Q13286 438 aa9.94□□□□□ -0.82
UBR4-207ENST00000425413 ZNF273Q14593 569 aa9.94□□□□□ -0.82
UBR4-207ENST00000425413 RTL6Q6ICC9 239 aa9.94□□□□□ -0.82
UBR4-207ENST00000425413 ZDHHC23Q8IYP9 409 aa9.94□□□□□ -0.82
UBR4-207ENST00000425413 LHFPL5Q8TAF8 219 aa9.94□□□□□ -0.82
UBR4-207ENST00000425413 PIK3IP1Q96FE7 263 aa9.94□□□□□ -0.82
UBR4-207ENST00000425413 LINC00470Q9BZP3 86 aa9.94□□□□□ -0.82
UBR4-207ENST00000425413 ZNF286AQ9HBT8 521 aa9.94□□□□□ -0.82
UBR4-207ENST00000425413 MTCH1Q9NZJ7 389 aa9.94□□□□□ -0.82
UBR4-207ENST00000425413 ZNF391Q9UJN7 358 aa9.94□□□□□ -0.82
UBR4-207ENST00000425413 HSF4Q9ULV5 492 aa9.94□□□□□ -0.82
UBR4-207ENST00000425413 CD300LBA8K4G0 201 aa9.94□□□□□ -0.82
UBR4-207ENST00000425413 SLC33A1O00400 549 aaPredicted RBP9.94□□□□□ -0.82
UBR4-207ENST00000425413 HS3ST1O14792 307 aa9.94□□□□□ -0.82
UBR4-207ENST00000425413 IL18BPO95998 194 aa9.94□□□□□ -0.82
UBR4-207ENST00000425413 AADACP22760 399 aa9.94□□□□□ -0.82
UBR4-207ENST00000425413 CA6P23280 308 aa9.94□□□□□ -0.82
UBR4-207ENST00000425413 WNT5AP41221 380 aa9.94□□□□□ -0.82
UBR4-207ENST00000425413 GGNBP1Q5YKI7 109 aa9.94□□□□□ -0.82
UBR4-207ENST00000425413 COLCA1Q6ZS62 124 aa9.94□□□□□ -0.82
UBR4-207ENST00000425413 LYZL2Q7Z4W2 148 aa9.94□□□□□ -0.82
UBR4-207ENST00000425413 MDP1Q86V88 176 aa9.94□□□□□ -0.82
UBR4-207ENST00000425413 MYPOPQ86VE0 399 aaPredicted RBP9.94□□□□□ -0.82
UBR4-207ENST00000425413 POC1AQ8NBT0 407 aa9.94□□□□□ -0.82
UBR4-207ENST00000425413 WNT2BQ93097 391 aa9.94□□□□□ -0.82
UBR4-207ENST00000425413 SPSB4Q96A44 273 aa9.94□□□□□ -0.82
UBR4-207ENST00000425413 APOBEC3DQ96AK3 386 aaPredicted RBP9.94□□□□□ -0.82
UBR4-207ENST00000425413 POM121L2Q96KW2 1035 aa9.94□□□□□ -0.82
UBR4-207ENST00000425413 C1orf123Q9NWV4 160 aa9.94□□□□□ -0.82
UBR4-207ENST00000425413 PCDHB10Q9UN67 800 aa9.94□□□□□ -0.82
UBR4-207ENST00000425413 TRAV39A0A0B4J263 110 aa9.93□□□□□ -0.82
UBR4-207ENST00000425413 LYZL6O75951 148 aa9.93□□□□□ -0.82
UBR4-207ENST00000425413 TSPAN9O75954 239 aa9.93□□□□□ -0.82
UBR4-207ENST00000425413 CTSDP07339 412 aaPredicted RBP9.93□□□□□ -0.82
UBR4-207ENST00000425413 PRKACAP17612 351 aa9.93□□□□□ -0.82
UBR4-207ENST00000425413 RCC1P18754 421 aaPredicted RBP9.93□□□□□ -0.82
UBR4-207ENST00000425413 APLNRP35414 380 aa9.93□□□□□ -0.82
UBR4-207ENST00000425413 SOX8P57073 446 aa9.93□□□□□ -0.82
UBR4-207ENST00000425413 PAN3Q58A45 887 aaKnown RBP9.93□□□□□ -0.82
UBR4-207ENST00000425413 SPIN3Q5JUX0 258 aa9.93□□□□□ -0.82
UBR4-207ENST00000425413 ALKBH2Q6NS38 261 aa9.93□□□□□ -0.82
UBR4-207ENST00000425413 PRSS54Q6PEW0 395 aa9.93□□□□□ -0.82
UBR4-207ENST00000425413 ASCL4Q6XD76 172 aa9.93□□□□□ -0.82
UBR4-207ENST00000425413 P4HA3Q7Z4N8 544 aa9.93□□□□□ -0.82
UBR4-207ENST00000425413 ZFP62Q8NB50 900 aaPredicted RBP9.93□□□□□ -0.82
UBR4-207ENST00000425413 UBALD1Q8TB05 177 aa9.93□□□□□ -0.82
UBR4-207ENST00000425413 RDH5Q92781 318 aa9.93□□□□□ -0.82
UBR4-207ENST00000425413 HIST1H2AAQ96QV6 131 aa9.93□□□□□ -0.82
UBR4-207ENST00000425413 SELEP16581 610 aa9.93□□□□□ -0.82
UBR4-207ENST00000425413 WT1P19544 449 aaPredicted RBP9.93□□□□□ -0.82
UBR4-207ENST00000425413 NSUN5P2Q63ZY6 315 aa9.93□□□□□ -0.82
UBR4-207ENST00000425413 TFAP2EQ6VUC0 442 aa9.93□□□□□ -0.82
UBR4-207ENST00000425413 WDYHV1Q96HA8 205 aa9.93□□□□□ -0.82
UBR4-207ENST00000425413 PARD6AQ9NPB6 346 aa9.93□□□□□ -0.82
UBR4-207ENST00000425413 EDARQ9UNE0 448 aa9.93□□□□□ -0.82
UBR4-207ENST00000425413 PQLC2LA1A4F0 135 aa9.93□□□□□ -0.82
UBR4-207ENST00000425413 CRYM-AS1A6NIL9 109 aa9.93□□□□□ -0.82
UBR4-207ENST00000425413 FAM74A7A6NL05 159 aa9.93□□□□□ -0.82
UBR4-207ENST00000425413 TRIM77I1YAP6 450 aa9.93□□□□□ -0.82
UBR4-207ENST00000425413 SCTP09683 121 aa9.93□□□□□ -0.82
UBR4-207ENST00000425413 GLP1RP43220 463 aa9.93□□□□□ -0.82
UBR4-207ENST00000425413 IDH3GP51553 393 aaPredicted RBP9.93□□□□□ -0.82
UBR4-207ENST00000425413 ERVS71-1P61550 626 aa9.93□□□□□ -0.82
UBR4-207ENST00000425413 HERV-K104P61576 105 aa9.93□□□□□ -0.82
UBR4-207ENST00000425413 PPA1Q15181 289 aa9.93□□□□□ -0.82
UBR4-207ENST00000425413 RNPS1Q15287 305 aaKnown RBP9.93□□□□□ -0.82
UBR4-207ENST00000425413 FAM74A3Q4VXF1 159 aa9.93□□□□□ -0.82
UBR4-207ENST00000425413 FDCSPQ8NFU4 85 aa9.93□□□□□ -0.82
UBR4-207ENST00000425413 SECTM1Q8WVN6 248 aa9.93□□□□□ -0.82
UBR4-207ENST00000425413 PARP12Q9H0J9 701 aaKnown RBP9.93□□□□□ -0.82
UBR4-207ENST00000425413 SLC2A9Q9NRM0 540 aa9.93□□□□□ -0.82
UBR4-207ENST00000425413 ZNF724A8MTY0 619 aa9.92□□□□□ -0.82
UBR4-207ENST00000425413 TRAPPC2LH3BP13 241 aa9.92□□□□□ -0.82
UBR4-207ENST00000425413 RRP8O43159 456 aaKnown RBP9.92□□□□□ -0.82
UBR4-207ENST00000425413 PHF1O43189 567 aaPredicted RBP9.92□□□□□ -0.82
UBR4-207ENST00000425413 FBXO24O75426 580 aa9.92□□□□□ -0.82
UBR4-207ENST00000425413 CA11O75493 328 aa9.92□□□□□ -0.82
UBR4-207ENST00000425413 IFNA21P01568 189 aa9.92□□□□□ -0.82
UBR4-207ENST00000425413 FTH1P19P0C7X4 201 aa9.92□□□□□ -0.82
UBR4-207ENST00000425413 DTYMKP23919 212 aa9.92□□□□□ -0.82
UBR4-207ENST00000425413 SURF2Q15527 256 aaPredicted RBP9.92□□□□□ -0.82
UBR4-207ENST00000425413 RPL7L1Q6DKI1 246 aaKnown RBP9.92□□□□□ -0.82
UBR4-207ENST00000425413 BAP18Q8IXM2 172 aa9.92□□□□□ -0.82
UBR4-207ENST00000425413 CNEP1R1Q8N9A8 125 aa9.92□□□□□ -0.82
UBR4-207ENST00000425413 TMEM231Q9H6L2 316 aa9.92□□□□□ -0.82
UBR4-207ENST00000425413 BARX1Q9HBU1 254 aaPredicted RBP9.92□□□□□ -0.82
UBR4-207ENST00000425413 CYTL1Q9NRR1 136 aa9.92□□□□□ -0.82
UBR4-207ENST00000425413 RPL36A-HNRNPH2H7BZ11 118 aa9.92□□□□□ -0.82
UBR4-207ENST00000425413 LRP3O75074 770 aa9.92□□□□□ -0.82
UBR4-207ENST00000425413 RHBDL1O75783 438 aa9.92□□□□□ -0.82
UBR4-207ENST00000425413 TPT1P13693 172 aaKnown RBP9.92□□□□□ -0.82
UBR4-207ENST00000425413 ARR3P36575 388 aa9.92□□□□□ -0.82
UBR4-207ENST00000425413 HOXA4Q00056 320 aaPredicted RBP9.92□□□□□ -0.82
UBR4-207ENST00000425413 CEACAM21Q3KPI0 293 aa9.92□□□□□ -0.82
UBR4-207ENST00000425413 SLC30A7Q8NEW0 376 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms