RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 C1orf141Q5JVX7 400 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 C1orf220Q5T0J3 134 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 SDHAF4Q5VUM1 108 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 NKAIN2Q5VXU1 208 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 ENPP6Q6UWR7 440 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 BTNL3Q6UXE8 466 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 NDUFAF7Q7L592 441 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 S100A7AQ86SG5 101 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 KLHDC8AQ8IYD2 350 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 SDR9C7Q8NEX9 313 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 OR56A4Q8NGH8 313 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 OR52E4Q8NGH9 312 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 OR56B1Q8NGI3 324 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 OR51S1Q8NGJ8 323 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 OR9A4Q8NGU2 314 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 OR13D1Q8NGV5 346 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 FIBINQ8TAL6 211 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 RNASEH2CQ8TDP1 164 aaKnown RBP2.3□□□□□ -2.04
LINC01040-201ENST00000425048 CD300LFQ8TDQ1 290 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 GNPDA2Q8TDQ7 276 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 DCUN1D4Q92564 292 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 GHSRQ92847 366 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 CPNE2Q96FN4 548 aaPredicted RBP2.3□□□□□ -2.04
LINC01040-201ENST00000425048 C12orf66Q96MD2 445 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 CCDC115Q96NT0 180 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 MGLLQ99685 303 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 RBBP8Q99708 897 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 KLHDC3Q9BQ90 382 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 NRIP2Q9BQI9 281 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 FAAP24Q9BTP7 215 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 ACTR3CQ9C0K3 210 aaPredicted RBP2.3□□□□□ -2.04
LINC01040-201ENST00000425048 MFFQ9GZY8 342 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 OR10A4Q9H209 315 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 ABCG5Q9H222 651 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 LRRN3Q9H3W5 708 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 ZNF430Q9H8G1 570 aaPredicted RBP2.3□□□□□ -2.04
LINC01040-201ENST00000425048 ANKRA2Q9H9E1 313 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 C6orf50Q9HD87 102 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 APMAPQ9HDC9 416 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 ZNF302Q9NR11 478 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 ZNF226Q9NYT6 803 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 CALML5Q9NZT1 146 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 DOK5Q9P104 306 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 NAGKQ9UJ70 344 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 SCML2Q9UQR0 700 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 ZFP30Q9Y2G7 519 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 ROBO1Q9Y6N7 1651 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 COL11A1P12107 1806 aaPredicted RBP2.3□□□□□ -2.04
LINC01040-201ENST00000425048 SIP14410 1827 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 RALGAPA2Q2PPJ7 1873 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 SCN8AQ9UQD0 1980 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 CCDC88CQ9P219 2028 aa2.3□□□□□ -2.04
LINC01040-201ENST00000425048 NUP214P35658 2090 aaPredicted RBP2.29□□□□□ -2.04
LINC01040-201ENST00000425048 ANK1P16157 1881 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 NLRC5Q86WI3 1866 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 BRWD3Q6RI45 1802 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 TECPR2O15040 1411 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 TNS2Q63HR2 1409 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 A0A1B0GUH1 482 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 TMEM150BA6NC51 233 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 OR5H1A6NKK0 313 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 FAM183AA6NL82 134 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 APOC4-APOC2K7ER74 178 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 DNAJB6O75190 326 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 CST1P01037 141 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 IFNA21P01568 189 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 GZMBP10144 247 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 RPA2P15927 270 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 ZNF7P17097 686 aaPredicted RBP2.29□□□□□ -2.04
LINC01040-201ENST00000425048 IL1RNP18510 177 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 TPSB2P20231 275 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 KDELR1P24390 212 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 GABRR2P28476 465 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 CD1BP29016 333 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 SDC2P34741 201 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 GGT2P36268 569 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 GLP1RP43220 463 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 CAMLGP49069 296 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 STK19P49842 368 aaPredicted RBP2.29□□□□□ -2.04
LINC01040-201ENST00000425048 AKR1C2P52895 323 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 EMP2P54851 167 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 CTBP2P56545 445 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 NDUFA6P56556 154 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 UBE2G2P60604 165 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 RPS20P60866 119 aaKnown RBP2.29□□□□□ -2.04
LINC01040-201ENST00000425048 OSTNP61366 133 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 ARF6P62330 175 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 OGDHQ02218 1023 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 AKR1C1Q04828 323 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 PPP1R8Q12972 351 aaKnown RBP2.29□□□□□ -2.04
LINC01040-201ENST00000425048 TPBGQ13641 420 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 KLF5Q13887 457 aaPredicted RBP2.29□□□□□ -2.04
LINC01040-201ENST00000425048 ARL6IP1Q15041 203 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 SLC9A3R2Q15599 337 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 TPSAB1Q15661 275 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 ZBTB6Q15916 424 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 PSG3Q16557 428 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 SNRNP35Q16560 246 aaKnown RBP2.29□□□□□ -2.04
LINC01040-201ENST00000425048 ATP6V1FQ16864 119 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 FAM83EQ2M2I3 478 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms