RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 FAM58AQ8N1B3 248 aa12.97□□□□□ -0.33
COL18A1-205ENST00000423214 WIPF2Q8TF74 440 aaPredicted RBP12.97□□□□□ -0.33
COL18A1-205ENST00000423214 RFKQ969G6 155 aa12.97□□□□□ -0.33
COL18A1-205ENST00000423214 SLC29A1Q99808 456 aa12.97□□□□□ -0.33
COL18A1-205ENST00000423214 GAL3ST2Q9H3Q3 398 aa12.97□□□□□ -0.33
COL18A1-205ENST00000423214 S100A14Q9HCY8 104 aa12.97□□□□□ -0.33
COL18A1-205ENST00000423214 PCDHGB5Q9Y5G0 923 aa12.97□□□□□ -0.33
COL18A1-205ENST00000423214 SIRPB1O00241 398 aa12.96□□□□□ -0.33
COL18A1-205ENST00000423214 PF4P02776 101 aa12.96□□□□□ -0.33
COL18A1-205ENST00000423214 DUSP1P28562 367 aa12.96□□□□□ -0.33
COL18A1-205ENST00000423214 NPBWR2P48146 333 aa12.96□□□□□ -0.33
COL18A1-205ENST00000423214 P2RX3P56373 397 aa12.96□□□□□ -0.33
COL18A1-205ENST00000423214 BLCAPP62952 87 aa12.96□□□□□ -0.33
COL18A1-205ENST00000423214 ZNF85Q03923 595 aa12.96□□□□□ -0.33
COL18A1-205ENST00000423214 TMED1Q13445 227 aa12.96□□□□□ -0.33
COL18A1-205ENST00000423214 SPIN3Q5JUX0 258 aa12.96□□□□□ -0.33
COL18A1-205ENST00000423214 Q6ZS46 218 aa12.96□□□□□ -0.33
COL18A1-205ENST00000423214 LHFPL2Q6ZUX7 228 aa12.96□□□□□ -0.33
COL18A1-205ENST00000423214 C10orf67Q8IYJ2 551 aa12.96□□□□□ -0.33
COL18A1-205ENST00000423214 DNAAF1Q8NEP3 725 aa12.96□□□□□ -0.33
COL18A1-205ENST00000423214 OR5AU1Q8NGC0 362 aa12.96□□□□□ -0.33
COL18A1-205ENST00000423214 OR52N4Q8NGI2 321 aa12.96□□□□□ -0.33
COL18A1-205ENST00000423214 TRUB1Q8WWH5 349 aaKnown RBP12.96□□□□□ -0.33
COL18A1-205ENST00000423214 RNFT2Q96EX2 444 aa12.96□□□□□ -0.33
COL18A1-205ENST00000423214 MBOAT4Q96T53 435 aa12.96□□□□□ -0.33
COL18A1-205ENST00000423214 SEBOXQ9HB31 216 aaPredicted RBP12.96□□□□□ -0.33
COL18A1-205ENST00000423214 EXOSC4Q9NPD3 245 aaKnown RBP12.96□□□□□ -0.33
COL18A1-205ENST00000423214 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.96□□□□□ -0.33
COL18A1-205ENST00000423214 ZNF281Q9Y2X9 895 aa12.96□□□□□ -0.33
COL18A1-205ENST00000423214 UBE2J1Q9Y385 318 aaPredicted RBP12.96□□□□□ -0.33
COL18A1-205ENST00000423214 TRGV10A0A0A0MS01 117 aa12.95□□□□□ -0.34
COL18A1-205ENST00000423214 FUOMA2VDF0 154 aa12.95□□□□□ -0.34
COL18A1-205ENST00000423214 PSPNO60542 156 aa12.95□□□□□ -0.34
COL18A1-205ENST00000423214 BAG2O95816 211 aa12.95□□□□□ -0.34
COL18A1-205ENST00000423214 CALCBP10092 127 aa12.95□□□□□ -0.34
COL18A1-205ENST00000423214 PRKACBP22694 351 aa12.95□□□□□ -0.34
COL18A1-205ENST00000423214 BRS3P32247 399 aa12.95□□□□□ -0.34
COL18A1-205ENST00000423214 OR3A1P47881 315 aa12.95□□□□□ -0.34
COL18A1-205ENST00000423214 MTCP1P56278 107 aa12.95□□□□□ -0.34
COL18A1-205ENST00000423214 ZNF146Q15072 292 aa12.95□□□□□ -0.34
COL18A1-205ENST00000423214 KHDC1LQ5JSQ8 128 aa12.95□□□□□ -0.34
COL18A1-205ENST00000423214 PRAMEF5Q5TYX0 476 aa12.95□□□□□ -0.34
COL18A1-205ENST00000423214 OR52W1Q6IF63 320 aa12.95□□□□□ -0.34
COL18A1-205ENST00000423214 PRSS35Q8N3Z0 413 aa12.95□□□□□ -0.34
COL18A1-205ENST00000423214 OR4P4Q8NGL7 312 aa12.95□□□□□ -0.34
COL18A1-205ENST00000423214 ZNF596Q8TC21 504 aa12.95□□□□□ -0.34
COL18A1-205ENST00000423214 C9orf16Q9BUW7 83 aa12.95□□□□□ -0.34
COL18A1-205ENST00000423214 LIN7BQ9HAP6 207 aa12.95□□□□□ -0.34
COL18A1-205ENST00000423214 GSTK1Q9Y2Q3 226 aa12.95□□□□□ -0.34
COL18A1-205ENST00000423214 GMPPBQ9Y5P6 360 aa12.95□□□□□ -0.34
COL18A1-205ENST00000423214 E9PQ18 207 aa12.94□□□□□ -0.34
COL18A1-205ENST00000423214 ERP29P30040 261 aaKnown RBP12.94□□□□□ -0.34
COL18A1-205ENST00000423214 KIR3DL2P43630 455 aa12.94□□□□□ -0.34
COL18A1-205ENST00000423214 SNRPGP62308 76 aaKnown RBP12.94□□□□□ -0.34
COL18A1-205ENST00000423214 TMEM244Q5VVB8 128 aa12.94□□□□□ -0.34
COL18A1-205ENST00000423214 FOXB2Q5VYV0 432 aa12.94□□□□□ -0.34
COL18A1-205ENST00000423214 CENPVQ7Z7K6 275 aaPredicted RBP12.94□□□□□ -0.34
COL18A1-205ENST00000423214 RTN4RL2Q86UN3 420 aa12.94□□□□□ -0.34
COL18A1-205ENST00000423214 RDH10Q8IZV5 341 aa12.94□□□□□ -0.34
COL18A1-205ENST00000423214 ABHD12Q8N2K0 398 aa12.94□□□□□ -0.34
COL18A1-205ENST00000423214 PQLC1Q8N2U9 271 aa12.94□□□□□ -0.34
COL18A1-205ENST00000423214 OR4X2Q8NGF9 303 aa12.94□□□□□ -0.34
COL18A1-205ENST00000423214 STMN2Q93045 179 aa12.94□□□□□ -0.34
COL18A1-205ENST00000423214 RFT1Q96AA3 541 aa12.94□□□□□ -0.34
COL18A1-205ENST00000423214 ADAT3Q96EY9 351 aaPredicted RBP12.94□□□□□ -0.34
COL18A1-205ENST00000423214 SLC25A33Q9BSK2 321 aa12.94□□□□□ -0.34
COL18A1-205ENST00000423214 NEK6Q9HC98 313 aa12.94□□□□□ -0.34
COL18A1-205ENST00000423214 DPM3Q9P2X0 92 aa12.94□□□□□ -0.34
COL18A1-205ENST00000423214 DAPL1A0PJW8 107 aa12.93□□□□□ -0.34
COL18A1-205ENST00000423214 FAM172BPA6NC97 362 aa12.93□□□□□ -0.34
COL18A1-205ENST00000423214 FAM90A22PA8MWA6 464 aa12.93□□□□□ -0.34
COL18A1-205ENST00000423214 SH2D1BO14796 132 aa12.93□□□□□ -0.34
COL18A1-205ENST00000423214 MMP23AO75900 390 aa12.93□□□□□ -0.34
COL18A1-205ENST00000423214 IGLL1P15814 213 aa12.93□□□□□ -0.34
COL18A1-205ENST00000423214 ATF1P18846 271 aa12.93□□□□□ -0.34
COL18A1-205ENST00000423214 CDK2P24941 298 aa12.93□□□□□ -0.34
COL18A1-205ENST00000423214 CEACAM3P40198 252 aa12.93□□□□□ -0.34
COL18A1-205ENST00000423214 SLC35A2P78381 396 aa12.93□□□□□ -0.34
COL18A1-205ENST00000423214 MEDAGQ5VYS4 303 aa12.93□□□□□ -0.34
COL18A1-205ENST00000423214 UTS2BQ765I0 119 aa12.93□□□□□ -0.34
COL18A1-205ENST00000423214 RNF166Q96A37 237 aaPredicted RBP12.93□□□□□ -0.34
COL18A1-205ENST00000423214 SPSB1Q96BD6 273 aa12.93□□□□□ -0.34
COL18A1-205ENST00000423214 OPALINQ96PE5 141 aa12.93□□□□□ -0.34
COL18A1-205ENST00000423214 OCSTAMPQ9BR26 566 aa12.93□□□□□ -0.34
COL18A1-205ENST00000423214 HMG20AQ9NP66 347 aa12.93□□□□□ -0.34
COL18A1-205ENST00000423214 TSSC4Q9Y5U2 329 aaPredicted RBP12.93□□□□□ -0.34
COL18A1-205ENST00000423214 IGKV1-9A0A0C4DH69 117 aa12.92□□□□□ -0.34
COL18A1-205ENST00000423214 TCRBV4S1A1TA0A5B7 111 aa12.92□□□□□ -0.34
COL18A1-205ENST00000423214 LEUTXA8MZ59 168 aa12.92□□□□□ -0.34
COL18A1-205ENST00000423214 J3QRE1 110 aa12.92□□□□□ -0.34
COL18A1-205ENST00000423214 CLIC3O95833 236 aa12.92□□□□□ -0.34
COL18A1-205ENST00000423214 OR2H2O95918 312 aa12.92□□□□□ -0.34
COL18A1-205ENST00000423214 LPLP06858 475 aa12.92□□□□□ -0.34
COL18A1-205ENST00000423214 ZNF44P15621 663 aa12.92□□□□□ -0.34
COL18A1-205ENST00000423214 CD24P25063 80 aa12.92□□□□□ -0.34
COL18A1-205ENST00000423214 PTGFRP43088 359 aa12.92□□□□□ -0.34
COL18A1-205ENST00000423214 ISL1P61371 349 aa12.92□□□□□ -0.34
COL18A1-205ENST00000423214 CD83Q01151 205 aa12.92□□□□□ -0.34
COL18A1-205ENST00000423214 BDH1Q02338 343 aa12.92□□□□□ -0.34
COL18A1-205ENST00000423214 PDZK1IP1Q13113 114 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms