RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 DOCK11Q5JSL3 2073 aa14.12□□□□□ -0.15
COL7A1-202ENST00000422991 A0A0B4J203 849 aa14.12□□□□□ -0.15
COL7A1-202ENST00000422991 KIAA1324LA8MWY0 1029 aaPredicted RBP14.12□□□□□ -0.15
COL7A1-202ENST00000422991 DVL1O14640 695 aa14.12□□□□□ -0.15
COL7A1-202ENST00000422991 SH2D1BO14796 132 aa14.12□□□□□ -0.15
COL7A1-202ENST00000422991 LDLRAD4O15165 306 aa14.12□□□□□ -0.15
COL7A1-202ENST00000422991 ZNF737O75373 536 aa14.12□□□□□ -0.15
COL7A1-202ENST00000422991 OR2H2O95918 312 aa14.12□□□□□ -0.15
COL7A1-202ENST00000422991 CHRM2P08172 466 aa14.12□□□□□ -0.15
COL7A1-202ENST00000422991 IGHV4-31P0DP07 118 aa14.12□□□□□ -0.15
COL7A1-202ENST00000422991 COL10A1Q03692 680 aa14.12□□□□□ -0.15
COL7A1-202ENST00000422991 IKZF1Q13422 519 aa14.12□□□□□ -0.15
COL7A1-202ENST00000422991 WDR25Q64LD2 544 aaPredicted RBP14.12□□□□□ -0.15
COL7A1-202ENST00000422991 USP43Q70EL4 1123 aa14.12□□□□□ -0.15
COL7A1-202ENST00000422991 LINC00596Q86U02 117 aa14.12□□□□□ -0.15
COL7A1-202ENST00000422991 ZNRF1Q8ND25 227 aa14.12□□□□□ -0.15
COL7A1-202ENST00000422991 SLC25A46Q96AG3 418 aa14.12□□□□□ -0.15
COL7A1-202ENST00000422991 ISOC1Q96CN7 298 aa14.12□□□□□ -0.15
COL7A1-202ENST00000422991 Q96M66 194 aa14.12□□□□□ -0.15
COL7A1-202ENST00000422991 SSBP3Q9BWW4 388 aaPredicted RBP14.12□□□□□ -0.15
COL7A1-202ENST00000422991 TMEM59Q9BXS4 323 aa14.12□□□□□ -0.15
COL7A1-202ENST00000422991 DCSTAMPQ9H295 470 aa14.12□□□□□ -0.15
COL7A1-202ENST00000422991 IFT22Q9H7X7 185 aa14.12□□□□□ -0.15
COL7A1-202ENST00000422991 CLN8Q9UBY8 286 aa14.12□□□□□ -0.15
COL7A1-202ENST00000422991 ZFHX3Q15911 3703 aa14.12□□□□□ -0.15
COL7A1-202ENST00000422991 TMEM272A0A1B0GTI8 110 aa14.11□□□□□ -0.15
COL7A1-202ENST00000422991 H3BMQ9 156 aa14.11□□□□□ -0.15
COL7A1-202ENST00000422991 SIRPB1O00241 398 aa14.11□□□□□ -0.15
COL7A1-202ENST00000422991 GEMIN2O14893 280 aaKnown RBP14.11□□□□□ -0.15
COL7A1-202ENST00000422991 NDUFB3O43676 98 aa14.11□□□□□ -0.15
COL7A1-202ENST00000422991 NOL3O60936 208 aaKnown RBP14.11□□□□□ -0.15
COL7A1-202ENST00000422991 MPIG6BO95866 241 aa14.11□□□□□ -0.15
COL7A1-202ENST00000422991 GZMKP49863 264 aa14.11□□□□□ -0.15
COL7A1-202ENST00000422991 NPY4RP50391 375 aa14.11□□□□□ -0.15
COL7A1-202ENST00000422991 GNB2P62879 340 aa14.11□□□□□ -0.15
COL7A1-202ENST00000422991 RPS27AP62979 156 aaKnown RBP14.11□□□□□ -0.15
COL7A1-202ENST00000422991 SPCS2Q15005 226 aa14.11□□□□□ -0.15
COL7A1-202ENST00000422991 MPV17LQ2QL34 196 aa14.11□□□□□ -0.15
COL7A1-202ENST00000422991 C2orf76Q3KRA6 126 aa14.11□□□□□ -0.15
COL7A1-202ENST00000422991 LRRC10Q5BKY1 277 aa14.11□□□□□ -0.15
COL7A1-202ENST00000422991 BIVMQ86UB2 503 aa14.11□□□□□ -0.15
COL7A1-202ENST00000422991 CROCCP3Q8IVE0 287 aa14.11□□□□□ -0.15
COL7A1-202ENST00000422991 FGFRL1Q8N441 504 aa14.11□□□□□ -0.15
COL7A1-202ENST00000422991 ASCC1Q8N9N2 400 aaKnown RBP14.11□□□□□ -0.15
COL7A1-202ENST00000422991 CHST4Q8NCG5 386 aa14.11□□□□□ -0.15
COL7A1-202ENST00000422991 TMEM185AQ8NFB2 350 aa14.11□□□□□ -0.15
COL7A1-202ENST00000422991 SELENOIQ9C0D9 397 aa14.11□□□□□ -0.15
COL7A1-202ENST00000422991 ZNF581Q9P0T4 197 aa14.11□□□□□ -0.15
COL7A1-202ENST00000422991 TMEM82A0PJX8 343 aa14.1□□□□□ -0.15
COL7A1-202ENST00000422991 FAM90A10PA6NDY2 464 aa14.1□□□□□ -0.15
COL7A1-202ENST00000422991 FAM90A18PA6NE21 464 aa14.1□□□□□ -0.15
COL7A1-202ENST00000422991 FAM90A16PA6NEW6 464 aa14.1□□□□□ -0.15
COL7A1-202ENST00000422991 FAM90A20PA6NIJ5 464 aa14.1□□□□□ -0.15
COL7A1-202ENST00000422991 FAM90A8PA6NJQ4 464 aa14.1□□□□□ -0.15
COL7A1-202ENST00000422991 FAM90A7PA6NKC0 464 aa14.1□□□□□ -0.15
COL7A1-202ENST00000422991 FAM90A22PA8MWA6 464 aa14.1□□□□□ -0.15
COL7A1-202ENST00000422991 FAM90A12PA8MX19 464 aa14.1□□□□□ -0.15
COL7A1-202ENST00000422991 FAM90A5PA8MXJ8 464 aa14.1□□□□□ -0.15
COL7A1-202ENST00000422991 FAM90A23PA8MXZ1 464 aa14.1□□□□□ -0.15
COL7A1-202ENST00000422991 B4DSR2 109 aa14.1□□□□□ -0.15
COL7A1-202ENST00000422991 K7N7A8 449 aa14.1□□□□□ -0.15
COL7A1-202ENST00000422991 SLC33A1O00400 549 aaPredicted RBP14.1□□□□□ -0.15
COL7A1-202ENST00000422991 PHF1O43189 567 aaPredicted RBP14.1□□□□□ -0.15
COL7A1-202ENST00000422991 TMEM127O75204 238 aa14.1□□□□□ -0.15
COL7A1-202ENST00000422991 FOXH1O75593 365 aa14.1□□□□□ -0.15
COL7A1-202ENST00000422991 INHBBP09529 407 aa14.1□□□□□ -0.15
COL7A1-202ENST00000422991 FAM90A15PP0C7V4 464 aa14.1□□□□□ -0.15
COL7A1-202ENST00000422991 FAM90A13PP0C7W8 464 aa14.1□□□□□ -0.15
COL7A1-202ENST00000422991 FAM90A14PP0C7W9 464 aa14.1□□□□□ -0.15
COL7A1-202ENST00000422991 FAM90A24PP0C7X0 464 aa14.1□□□□□ -0.15
COL7A1-202ENST00000422991 ZNF44P15621 663 aa14.1□□□□□ -0.15
COL7A1-202ENST00000422991 LMO1P25800 156 aa14.1□□□□□ -0.15
COL7A1-202ENST00000422991 ZFP36P26651 326 aaKnown RBP14.1□□□□□ -0.15
COL7A1-202ENST00000422991 KRTAP1-1Q07627 177 aa14.1□□□□□ -0.15
COL7A1-202ENST00000422991 PDCD1Q15116 288 aa14.1□□□□□ -0.15
COL7A1-202ENST00000422991 TAF9Q16594 264 aa14.1□□□□□ -0.15
COL7A1-202ENST00000422991 IDNKQ5T6J7 187 aa14.1□□□□□ -0.15
COL7A1-202ENST00000422991 C17orf107Q6ZR85 190 aa14.1□□□□□ -0.15
COL7A1-202ENST00000422991 LINC01356Q8N9X3 169 aa14.1□□□□□ -0.15
COL7A1-202ENST00000422991 ST8SIA4Q92187 359 aa14.1□□□□□ -0.15
COL7A1-202ENST00000422991 MSI2Q96DH6 328 aaKnown RBP14.1□□□□□ -0.15
COL7A1-202ENST00000422991 TM2D1Q9BX74 207 aa14.1□□□□□ -0.15
COL7A1-202ENST00000422991 BARHL1Q9BZE3 327 aa14.1□□□□□ -0.15
COL7A1-202ENST00000422991 FAM234AQ9H0X4 552 aa14.1□□□□□ -0.15
COL7A1-202ENST00000422991 SLC25A10Q9UBX3 287 aaPredicted RBP14.1□□□□□ -0.15
COL7A1-202ENST00000422991 OR5V1Q9UGF6 321 aa14.1□□□□□ -0.15
COL7A1-202ENST00000422991 POLR3KQ9Y2Y1 108 aaPredicted RBP14.1□□□□□ -0.15
COL7A1-202ENST00000422991 NIPBLQ6KC79 2804 aaeCLIP14.1□□□□□ -0.15
COL7A1-202ENST00000422991 ABCA1O95477 2261 aa14.1□□□□□ -0.15
COL7A1-202ENST00000422991 TRAV24A0A0B4J272 114 aa14.09□□□□□ -0.15
COL7A1-202ENST00000422991 DEGS1O15121 323 aa14.09□□□□□ -0.15
COL7A1-202ENST00000422991 PSPNO60542 156 aa14.09□□□□□ -0.15
COL7A1-202ENST00000422991 OR7C1O76099 320 aaPredicted RBP14.09□□□□□ -0.15
COL7A1-202ENST00000422991 TK1P04183 234 aa14.09□□□□□ -0.15
COL7A1-202ENST00000422991 MSMBP08118 114 aa14.09□□□□□ -0.15
COL7A1-202ENST00000422991 SNRPBP14678 240 aaKnown RBP14.09□□□□□ -0.15
COL7A1-202ENST00000422991 GABRR1P24046 479 aa14.09□□□□□ -0.15
COL7A1-202ENST00000422991 OR3A1P47881 315 aa14.09□□□□□ -0.15
COL7A1-202ENST00000422991 SCAND1P57086 179 aa14.09□□□□□ -0.15
COL7A1-202ENST00000422991 LCN2P80188 198 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms