RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 FKBP6O75344 327 aa6.42□□□□□ -1.38
VIM-202ENST00000421459 OR2F2O95006 317 aa6.42□□□□□ -1.38
VIM-202ENST00000421459 OR2H2O95918 312 aa6.42□□□□□ -1.38
VIM-202ENST00000421459 IGKV1D-12P01611 117 aa6.42□□□□□ -1.38
VIM-202ENST00000421459 IGLV1-47P01700 117 aa6.42□□□□□ -1.38
VIM-202ENST00000421459 KIR3DL2P43630 455 aa6.42□□□□□ -1.38
VIM-202ENST00000421459 OR3A4PP47883 348 aa6.42□□□□□ -1.38
VIM-202ENST00000421459 P2RX3P56373 397 aa6.42□□□□□ -1.38
VIM-202ENST00000421459 BDH1Q02338 343 aa6.42□□□□□ -1.38
VIM-202ENST00000421459 SCN1BQ07699 218 aa6.42□□□□□ -1.38
VIM-202ENST00000421459 DIAPH2-AS1Q14236 149 aa6.42□□□□□ -1.38
VIM-202ENST00000421459 GK3PQ14409 553 aa6.42□□□□□ -1.38
VIM-202ENST00000421459 RBM39Q14498 530 aaKnown RBP6.42□□□□□ -1.38
VIM-202ENST00000421459 HNF4GQ14541 408 aa6.42□□□□□ -1.38
VIM-202ENST00000421459 TPTE2P1Q5T6R2 138 aa6.42□□□□□ -1.38
VIM-202ENST00000421459 LCNL1Q6ZST4 164 aa6.42□□□□□ -1.38
VIM-202ENST00000421459 C8orf86Q6ZUL3 223 aa6.42□□□□□ -1.38
VIM-202ENST00000421459 SPATA24Q86W54 205 aa6.42□□□□□ -1.38
VIM-202ENST00000421459 ARHGAP24Q8N264 748 aa6.42□□□□□ -1.38
VIM-202ENST00000421459 OR4X2Q8NGF9 303 aa6.42□□□□□ -1.38
VIM-202ENST00000421459 TFAP2CQ92754 450 aa6.42□□□□□ -1.38
VIM-202ENST00000421459 LEAP2Q969E1 77 aa6.42□□□□□ -1.38
VIM-202ENST00000421459 RNF166Q96A37 237 aaPredicted RBP6.42□□□□□ -1.38
VIM-202ENST00000421459 BORCS8Q96FH0 119 aa6.42□□□□□ -1.38
VIM-202ENST00000421459 WWC2-AS2Q96NR7 200 aa6.42□□□□□ -1.38
VIM-202ENST00000421459 SPACA5Q96QH8 159 aa6.42□□□□□ -1.38
VIM-202ENST00000421459 B9D2Q9BPU9 175 aa6.42□□□□□ -1.38
VIM-202ENST00000421459 MOB1AQ9H8S9 216 aa6.42□□□□□ -1.38
VIM-202ENST00000421459 PLEKHA1Q9HB21 404 aa6.42□□□□□ -1.38
VIM-202ENST00000421459 H2AFY2Q9P0M6 372 aaPredicted RBP6.42□□□□□ -1.38
VIM-202ENST00000421459 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.42□□□□□ -1.38
VIM-202ENST00000421459 GSTK1Q9Y2Q3 226 aa6.42□□□□□ -1.38
VIM-202ENST00000421459 LOC107986453A0A1B0GWG9 222 aa6.41□□□□□ -1.38
VIM-202ENST00000421459 PSMB11A5LHX3 300 aa6.41□□□□□ -1.38
VIM-202ENST00000421459 METTL15A6NJ78 407 aa6.41□□□□□ -1.38
VIM-202ENST00000421459 AQP12BA6NM10 295 aa6.41□□□□□ -1.38
VIM-202ENST00000421459 LEUTXA8MZ59 168 aa6.41□□□□□ -1.38
VIM-202ENST00000421459 BUB1B-PAK6H3BSN5 160 aa6.41□□□□□ -1.38
VIM-202ENST00000421459 MGST3O14880 152 aa6.41□□□□□ -1.38
VIM-202ENST00000421459 BRS3P32247 399 aa6.41□□□□□ -1.38
VIM-202ENST00000421459 POLR2IP36954 125 aaKnown RBP6.41□□□□□ -1.38
VIM-202ENST00000421459 THBS3P49746 956 aa6.41□□□□□ -1.38
VIM-202ENST00000421459 MTCP1P56278 107 aa6.41□□□□□ -1.38
VIM-202ENST00000421459 IL18R1Q13478 541 aa6.41□□□□□ -1.38
VIM-202ENST00000421459 ZNF146Q15072 292 aa6.41□□□□□ -1.38
VIM-202ENST00000421459 C17orf58Q2M2W7 97 aa6.41□□□□□ -1.38
VIM-202ENST00000421459 DNAL1Q4LDG9 190 aa6.41□□□□□ -1.38
VIM-202ENST00000421459 TP53I3Q53FA7 332 aa6.41□□□□□ -1.38
VIM-202ENST00000421459 SLX4IPQ5VYV7 408 aa6.41□□□□□ -1.38
VIM-202ENST00000421459 C12orf73Q69YU5 71 aa6.41□□□□□ -1.38
VIM-202ENST00000421459 FAHD1Q6P587 224 aa6.41□□□□□ -1.38
VIM-202ENST00000421459 C16orf82Q7Z2V1 217 aa6.41□□□□□ -1.38
VIM-202ENST00000421459 AQP12AQ8IXF9 295 aa6.41□□□□□ -1.38
VIM-202ENST00000421459 OSR2Q8N2R0 312 aa6.41□□□□□ -1.38
VIM-202ENST00000421459 OR5D18Q8NGL1 313 aa6.41□□□□□ -1.38
VIM-202ENST00000421459 TMEM163Q8TC26 289 aa6.41□□□□□ -1.38
VIM-202ENST00000421459 ITFG2Q969R8 447 aa6.41□□□□□ -1.38
VIM-202ENST00000421459 FGGYQ96C11 551 aa6.41□□□□□ -1.38
VIM-202ENST00000421459 COQ2Q96H96 371 aa6.41□□□□□ -1.38
VIM-202ENST00000421459 ASCL2Q99929 193 aa6.41□□□□□ -1.38
VIM-202ENST00000421459 TEX12Q9BXU0 123 aa6.41□□□□□ -1.38
VIM-202ENST00000421459 CHST5Q9GZS9 411 aa6.41□□□□□ -1.38
VIM-202ENST00000421459 PPIL3Q9H2H8 161 aaKnown RBP6.41□□□□□ -1.38
VIM-202ENST00000421459 HMG20AQ9NP66 347 aa6.41□□□□□ -1.38
VIM-202ENST00000421459 UBE2J1Q9Y385 318 aaPredicted RBP6.41□□□□□ -1.38
VIM-202ENST00000421459 STARD9Q9P2P6 4700 aa6.4□□□□□ -1.38
VIM-202ENST00000421459 DNAH1Q9P2D7 4330 aa6.4□□□□□ -1.38
VIM-202ENST00000421459 TRGV10A0A0A0MS01 117 aa6.4□□□□□ -1.38
VIM-202ENST00000421459 TRAV39A0A0B4J263 110 aa6.4□□□□□ -1.38
VIM-202ENST00000421459 TRBV2A0A0J9YWF9 115 aa6.4□□□□□ -1.38
VIM-202ENST00000421459 A0A1W2PPE3 182 aa6.4□□□□□ -1.38
VIM-202ENST00000421459 DHRS7CA6NNS2 312 aa6.4□□□□□ -1.38
VIM-202ENST00000421459 ZAR1LA6NP61 321 aa6.4□□□□□ -1.38
VIM-202ENST00000421459 NUDT19A8MXV4 375 aa6.4□□□□□ -1.38
VIM-202ENST00000421459 E9PQ18 207 aa6.4□□□□□ -1.38
VIM-202ENST00000421459 H3BUI4 141 aa6.4□□□□□ -1.38
VIM-202ENST00000421459 TOR1AO14656 332 aa6.4□□□□□ -1.38
VIM-202ENST00000421459 GYG2O15488 501 aa6.4□□□□□ -1.38
VIM-202ENST00000421459 GATBO75879 557 aaKnown RBP6.4□□□□□ -1.38
VIM-202ENST00000421459 DUS4LO95620 317 aaKnown RBP6.4□□□□□ -1.38
VIM-202ENST00000421459 CLIC3O95833 236 aa6.4□□□□□ -1.38
VIM-202ENST00000421459 KRT8P05787 483 aa6.4□□□□□ -1.38
VIM-202ENST00000421459 ATF1P18846 271 aa6.4□□□□□ -1.38
VIM-202ENST00000421459 NFYBP25208 207 aa6.4□□□□□ -1.38
VIM-202ENST00000421459 ERP29P30040 261 aaKnown RBP6.4□□□□□ -1.38
VIM-202ENST00000421459 RBP2P50120 134 aa6.4□□□□□ -1.38
VIM-202ENST00000421459 LUMP51884 338 aaPredicted RBP6.4□□□□□ -1.38
VIM-202ENST00000421459 ATP1B3P54709 279 aa6.4□□□□□ -1.38
VIM-202ENST00000421459 RAB25P57735 213 aa6.4□□□□□ -1.38
VIM-202ENST00000421459 ACTR3P61158 418 aa6.4□□□□□ -1.38
VIM-202ENST00000421459 RPL23AP62750 156 aaKnown RBP6.4□□□□□ -1.38
VIM-202ENST00000421459 PDZK1IP1Q13113 114 aa6.4□□□□□ -1.38
VIM-202ENST00000421459 KPNB1Q14974 876 aaKnown RBP6.4□□□□□ -1.38
VIM-202ENST00000421459 ATXN7L3Q14CW9 347 aaPredicted RBP6.4□□□□□ -1.38
VIM-202ENST00000421459 LTC4SQ16873 150 aa6.4□□□□□ -1.38
VIM-202ENST00000421459 HLA-DRB5Q30154 266 aa6.4□□□□□ -1.38
VIM-202ENST00000421459 NKAPLQ5M9Q1 402 aa6.4□□□□□ -1.38
VIM-202ENST00000421459 NXNL2Q5VZ03 156 aa6.4□□□□□ -1.38
VIM-202ENST00000421459 Q6P435 159 aa6.4□□□□□ -1.38
VIM-202ENST00000421459 HEPN1Q6WQI6 88 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms