RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 PSENENQ9NZ42 101 aa9.39□□□□□ -0.91
PTCH1-206ENST00000421141 CLEC18AA5D8T8 446 aa9.39□□□□□ -0.91
PTCH1-206ENST00000421141 ZNF785A8K8V0 405 aa9.39□□□□□ -0.91
PTCH1-206ENST00000421141 ASAH2BP0C7U1 165 aa9.39□□□□□ -0.91
PTCH1-206ENST00000421141 GP2P55259 537 aaKnown RBP9.39□□□□□ -0.91
PTCH1-206ENST00000421141 PDCD1Q15116 288 aa9.39□□□□□ -0.91
PTCH1-206ENST00000421141 TBR1Q16650 682 aa9.39□□□□□ -0.91
PTCH1-206ENST00000421141 CLEC18CQ8NCF0 446 aa9.39□□□□□ -0.91
PTCH1-206ENST00000421141 CTHRC1Q96CG8 243 aa9.39□□□□□ -0.91
PTCH1-206ENST00000421141 PIPOXQ9P0Z9 390 aa9.39□□□□□ -0.91
PTCH1-206ENST00000421141 SF3B6Q9Y3B4 125 aaKnown RBP9.39□□□□□ -0.91
PTCH1-206ENST00000421141 CLDN14O95500 239 aa9.39□□□□□ -0.91
PTCH1-206ENST00000421141 RBP4P02753 201 aa9.39□□□□□ -0.91
PTCH1-206ENST00000421141 SLA2Q9H6Q3 261 aa9.39□□□□□ -0.91
PTCH1-206ENST00000421141 NRARPQ7Z6K4 114 aa9.39□□□□□ -0.91
PTCH1-206ENST00000421141 RTN4IP1Q8WWV3 396 aaPredicted RBP9.39□□□□□ -0.91
PTCH1-206ENST00000421141 TINAGL1Q9GZM7 467 aaPredicted RBP9.39□□□□□ -0.91
PTCH1-206ENST00000421141 HRH4Q9H3N8 390 aa9.39□□□□□ -0.91
PTCH1-206ENST00000421141 CHCHD2Q9Y6H1 151 aaPredicted RBP9.39□□□□□ -0.91
PTCH1-206ENST00000421141 RFPL4AA6NLU0 287 aa9.39□□□□□ -0.91
PTCH1-206ENST00000421141 RFPL4AL1F8VTS6 287 aa9.39□□□□□ -0.91
PTCH1-206ENST00000421141 J3QT63 122 aa9.39□□□□□ -0.91
PTCH1-206ENST00000421141 SYNGR3O43761 229 aa9.39□□□□□ -0.91
PTCH1-206ENST00000421141 NTN1O95631 604 aa9.39□□□□□ -0.91
PTCH1-206ENST00000421141 MGST1P10620 155 aaKnown RBP9.39□□□□□ -0.91
PTCH1-206ENST00000421141 ACKR3P25106 362 aa9.39□□□□□ -0.91
PTCH1-206ENST00000421141 SLC35B1P78383 322 aa9.39□□□□□ -0.91
PTCH1-206ENST00000421141 ZPLD1Q8TCW7 415 aa9.39□□□□□ -0.91
PTCH1-206ENST00000421141 RNF167Q9H6Y7 350 aa9.39□□□□□ -0.91
PTCH1-206ENST00000421141 MRM2Q9UI43 246 aaKnown RBP9.39□□□□□ -0.91
PTCH1-206ENST00000421141 ZNF230Q9UIE0 474 aaPredicted RBP9.39□□□□□ -0.91
PTCH1-206ENST00000421141 DVL1O14640 695 aa9.39□□□□□ -0.91
PTCH1-206ENST00000421141 DVL1P1P54792 670 aaPredicted RBP9.39□□□□□ -0.91
PTCH1-206ENST00000421141 CHST5Q9GZS9 411 aa9.39□□□□□ -0.91
PTCH1-206ENST00000421141 COA4Q9NYJ1 87 aa9.39□□□□□ -0.91
PTCH1-206ENST00000421141 A0A1W2PRD5 423 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 A0A1W2PRF3 423 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 A0A1W2PRM7 423 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 RECKO95980 971 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 EVX1P49640 407 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 FLI1Q01543 452 aaPredicted RBP9.38□□□□□ -0.91
PTCH1-206ENST00000421141 C6orf201Q7Z4U5 140 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 FRZBQ92765 325 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 MRPS18CQ9Y3D5 142 aaKnown RBP9.38□□□□□ -0.91
PTCH1-206ENST00000421141 FAM157AC9JC47 383 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 E5RGE8 158 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 LINC00271P0C7V0 271 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 HABP2Q14520 560 aaPredicted RBP9.38□□□□□ -0.91
PTCH1-206ENST00000421141 ZNF529Q6P280 563 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 RNF133Q8WVZ7 376 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 RNASE6Q93091 150 aaKnown RBP9.38□□□□□ -0.91
PTCH1-206ENST00000421141 NSG2Q9Y328 171 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 OR3A1P47881 315 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 UBE2G1P62253 170 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 IGLV3-21P80748 117 aaPredicted RBP9.38□□□□□ -0.91
PTCH1-206ENST00000421141 MPV17LQ2QL34 196 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 MFSD4AQ8N468 514 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 PERPQ96FX8 193 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 ACY3Q96HD9 319 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 ZNF714Q96N38 554 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 TPPP3Q9BW30 176 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 COL25A1Q9BXS0 654 aaPredicted RBP9.38□□□□□ -0.91
PTCH1-206ENST00000421141 NPAP1Q9NZP6 1156 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 MED13Q9UHV7 2174 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 TRBV23-1A0A0A0MS06 115 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 LANCL1O43813 399 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 SEMG1P04279 462 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 IL11P20809 199 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 PSG4Q00888 419 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 LINC01560Q8TB33 94 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 MARCH1Q8TCQ1 289 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 SRXN1Q9BYN0 137 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 TMEM231Q9H6L2 316 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 TIMM9Q9Y5J7 89 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 LIMK1P53667 647 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 SLC25A30Q5SVS4 291 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 OR52L2PQ8NGH6 319 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 TERB2Q8NHR7 220 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 MSRB2Q9Y3D2 182 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 IGHV3-43A0A0B4J1X8 118 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 CRYZL1O95825 349 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 CD3DP04234 171 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 IGHV3-43DP0DP04 118 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 ELLP55199 621 aaPredicted RBP9.38□□□□□ -0.91
PTCH1-206ENST00000421141 KDF1Q8NAX2 398 aaPredicted RBP9.38□□□□□ -0.91
PTCH1-206ENST00000421141 IMMP1LQ96LU5 166 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 AAMDCQ9H7C9 122 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 TAF9BQ9HBM6 251 aa9.38□□□□□ -0.91
PTCH1-206ENST00000421141 SSX4O60224 188 aa9.37□□□□□ -0.91
PTCH1-206ENST00000421141 OR7C2O60412 319 aa9.37□□□□□ -0.91
PTCH1-206ENST00000421141 FAM106CPP0CH98 169 aa9.37□□□□□ -0.91
PTCH1-206ENST00000421141 IAPPP10997 89 aa9.37□□□□□ -0.91
PTCH1-206ENST00000421141 DGCR2P98153 550 aa9.37□□□□□ -0.91
PTCH1-206ENST00000421141 TMUB1Q9BVT8 246 aa9.37□□□□□ -0.91
PTCH1-206ENST00000421141 C11orf54Q9H0W9 315 aaPredicted RBP9.37□□□□□ -0.91
PTCH1-206ENST00000421141 FRRS1LQ9P0K9 344 aa9.37□□□□□ -0.91
PTCH1-206ENST00000421141 CLN5O75503 358 aa9.37□□□□□ -0.91
PTCH1-206ENST00000421141 UMODP07911 640 aa9.37□□□□□ -0.91
PTCH1-206ENST00000421141 HTR2BP41595 481 aa9.37□□□□□ -0.91
PTCH1-206ENST00000421141 PDZK1IP1Q13113 114 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms