RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 PRAMEF5Q5TYX0 476 aa13.41□□□□□ -0.26
UPF3AP3-201ENST00000420996 SSX6Q7RTT6 188 aa13.41□□□□□ -0.26
UPF3AP3-201ENST00000420996 OSR2Q8N2R0 312 aa13.41□□□□□ -0.26
UPF3AP3-201ENST00000420996 TCEANCQ8N8B7 351 aa13.41□□□□□ -0.26
UPF3AP3-201ENST00000420996 DNAAF1Q8NEP3 725 aa13.41□□□□□ -0.26
UPF3AP3-201ENST00000420996 TMEM163Q8TC26 289 aa13.41□□□□□ -0.26
UPF3AP3-201ENST00000420996 BCAS4Q8TDM0 211 aa13.41□□□□□ -0.26
UPF3AP3-201ENST00000420996 CORO2AQ92828 525 aa13.41□□□□□ -0.26
UPF3AP3-201ENST00000420996 C10orf35Q96D05 121 aa13.41□□□□□ -0.26
UPF3AP3-201ENST00000420996 THTPAQ9BU02 230 aa13.41□□□□□ -0.26
UPF3AP3-201ENST00000420996 ADI1Q9BV57 179 aa13.41□□□□□ -0.26
UPF3AP3-201ENST00000420996 TAS2R3Q9NYW6 316 aa13.41□□□□□ -0.26
UPF3AP3-201ENST00000420996 SH2D7A6NKC9 451 aaPredicted RBP13.4□□□□□ -0.26
UPF3AP3-201ENST00000420996 PRKACAP17612 351 aa13.4□□□□□ -0.26
UPF3AP3-201ENST00000420996 BCL3P20749 454 aa13.4□□□□□ -0.26
UPF3AP3-201ENST00000420996 ATP1B3P54709 279 aa13.4□□□□□ -0.26
UPF3AP3-201ENST00000420996 C9orf152Q5JTZ5 239 aa13.4□□□□□ -0.26
UPF3AP3-201ENST00000420996 GID4Q8IVV7 300 aa13.4□□□□□ -0.26
UPF3AP3-201ENST00000420996 MRPL41Q8IXM3 137 aaKnown RBP13.4□□□□□ -0.26
UPF3AP3-201ENST00000420996 OR51D1Q8NGF3 324 aa13.4□□□□□ -0.26
UPF3AP3-201ENST00000420996 PP6455Q8WZ26 134 aa13.4□□□□□ -0.26
UPF3AP3-201ENST00000420996 PCDHGB5Q9Y5G0 923 aa13.4□□□□□ -0.26
UPF3AP3-201ENST00000420996 RYR3Q15413 4870 aa13.4□□□□□ -0.26
UPF3AP3-201ENST00000420996 FUOMA2VDF0 154 aa13.39□□□□□ -0.27
UPF3AP3-201ENST00000420996 METTL15A6NJ78 407 aa13.39□□□□□ -0.27
UPF3AP3-201ENST00000420996 OOSP1A8MZH6 123 aa13.39□□□□□ -0.27
UPF3AP3-201ENST00000420996 LY6LH3BQJ8 138 aa13.39□□□□□ -0.27
UPF3AP3-201ENST00000420996 BUB1B-PAK6H3BSN5 160 aa13.39□□□□□ -0.27
UPF3AP3-201ENST00000420996 SH2D1BO14796 132 aa13.39□□□□□ -0.27
UPF3AP3-201ENST00000420996 FAM107AO95990 144 aa13.39□□□□□ -0.27
UPF3AP3-201ENST00000420996 DCTN2Q13561 401 aaKnown RBP13.39□□□□□ -0.27
UPF3AP3-201ENST00000420996 KPNB1Q14974 876 aaKnown RBP13.39□□□□□ -0.27
UPF3AP3-201ENST00000420996 HLA-DRB5Q30154 266 aa13.39□□□□□ -0.27
UPF3AP3-201ENST00000420996 TPTE2P1Q5T6R2 138 aa13.39□□□□□ -0.27
UPF3AP3-201ENST00000420996 ETV3LQ6ZN32 361 aa13.39□□□□□ -0.27
UPF3AP3-201ENST00000420996 SPATA24Q86W54 205 aa13.39□□□□□ -0.27
UPF3AP3-201ENST00000420996 TBX5Q99593 518 aa13.39□□□□□ -0.27
UPF3AP3-201ENST00000420996 MCRIP2Q9BUT9 160 aaKnown RBP13.39□□□□□ -0.27
UPF3AP3-201ENST00000420996 ZNF286AQ9HBT8 521 aa13.39□□□□□ -0.27
UPF3AP3-201ENST00000420996 HMG20AQ9NP66 347 aa13.39□□□□□ -0.27
UPF3AP3-201ENST00000420996 A0A1W2PQL4 384 aaPredicted RBP13.38□□□□□ -0.27
UPF3AP3-201ENST00000420996 TCRBV3S1A0A5B6 114 aa13.38□□□□□ -0.27
UPF3AP3-201ENST00000420996 PSMB11A5LHX3 300 aa13.38□□□□□ -0.27
UPF3AP3-201ENST00000420996 FAM172BPA6NC97 362 aa13.38□□□□□ -0.27
UPF3AP3-201ENST00000420996 SIRPB1O00241 398 aa13.38□□□□□ -0.27
UPF3AP3-201ENST00000420996 TOR1AO14656 332 aa13.38□□□□□ -0.27
UPF3AP3-201ENST00000420996 SULT1C4O75897 302 aa13.38□□□□□ -0.27
UPF3AP3-201ENST00000420996 OR2T7P0C7T2 308 aa13.38□□□□□ -0.27
UPF3AP3-201ENST00000420996 CALCBP10092 127 aa13.38□□□□□ -0.27
UPF3AP3-201ENST00000420996 GDNFP39905 211 aa13.38□□□□□ -0.27
UPF3AP3-201ENST00000420996 MNDAP41218 407 aa13.38□□□□□ -0.27
UPF3AP3-201ENST00000420996 GLIPR1P48060 266 aa13.38□□□□□ -0.27
UPF3AP3-201ENST00000420996 POU3F4P49335 361 aa13.38□□□□□ -0.27
UPF3AP3-201ENST00000420996 THBS3P49746 956 aa13.38□□□□□ -0.27
UPF3AP3-201ENST00000420996 PRRX1P54821 245 aa13.38□□□□□ -0.27
UPF3AP3-201ENST00000420996 SNU13P55769 128 aaKnown RBP13.38□□□□□ -0.27
UPF3AP3-201ENST00000420996 MTCP1P56278 107 aa13.38□□□□□ -0.27
UPF3AP3-201ENST00000420996 C12orf73Q69YU5 71 aa13.38□□□□□ -0.27
UPF3AP3-201ENST00000420996 CCDC144NLQ6NUI1 221 aa13.38□□□□□ -0.27
UPF3AP3-201ENST00000420996 IL4I1Q96RQ9 567 aa13.38□□□□□ -0.27
UPF3AP3-201ENST00000420996 ZNF649Q9BS31 505 aa13.38□□□□□ -0.27
UPF3AP3-201ENST00000420996 EXOSC4Q9NPD3 245 aaKnown RBP13.38□□□□□ -0.27
UPF3AP3-201ENST00000420996 WARS2Q9UGM6 360 aaKnown RBP13.38□□□□□ -0.27
UPF3AP3-201ENST00000420996 A0A087X0M5 115 aa13.37□□□□□ -0.27
UPF3AP3-201ENST00000420996 IGKV1-9A0A0C4DH69 117 aa13.37□□□□□ -0.27
UPF3AP3-201ENST00000420996 LOC107986453A0A1B0GWG9 222 aa13.37□□□□□ -0.27
UPF3AP3-201ENST00000420996 A0A1B0GX30 115 aa13.37□□□□□ -0.27
UPF3AP3-201ENST00000420996 ZAR1LA6NP61 321 aa13.37□□□□□ -0.27
UPF3AP3-201ENST00000420996 OR2H2O95918 312 aa13.37□□□□□ -0.27
UPF3AP3-201ENST00000420996 FAM106CPP0CH98 169 aa13.37□□□□□ -0.27
UPF3AP3-201ENST00000420996 PRKACBP22694 351 aa13.37□□□□□ -0.27
UPF3AP3-201ENST00000420996 LMO1P25800 156 aa13.37□□□□□ -0.27
UPF3AP3-201ENST00000420996 EPHA2P29317 976 aa13.37□□□□□ -0.27
UPF3AP3-201ENST00000420996 RPL23AP62750 156 aaKnown RBP13.37□□□□□ -0.27
UPF3AP3-201ENST00000420996 AESQ08117 197 aa13.37□□□□□ -0.27
UPF3AP3-201ENST00000420996 PDZK1IP1Q13113 114 aa13.37□□□□□ -0.27
UPF3AP3-201ENST00000420996 FLOT2Q14254 428 aa13.37□□□□□ -0.27
UPF3AP3-201ENST00000420996 ZNF329Q86UD4 541 aa13.37□□□□□ -0.27
UPF3AP3-201ENST00000420996 THNSL2Q86YJ6 484 aa13.37□□□□□ -0.27
UPF3AP3-201ENST00000420996 PRSS35Q8N3Z0 413 aa13.37□□□□□ -0.27
UPF3AP3-201ENST00000420996 OR4D6Q8NGJ1 314 aa13.37□□□□□ -0.27
UPF3AP3-201ENST00000420996 ADAT3Q96EY9 351 aaPredicted RBP13.37□□□□□ -0.27
UPF3AP3-201ENST00000420996 ZMAT5Q9UDW3 170 aaKnown RBP13.37□□□□□ -0.27
UPF3AP3-201ENST00000420996 GSTK1Q9Y2Q3 226 aa13.37□□□□□ -0.27
UPF3AP3-201ENST00000420996 MOB4Q9Y3A3 225 aa13.37□□□□□ -0.27
UPF3AP3-201ENST00000420996 HSPE1-MOB4S4R3N1 261 aa13.37□□□□□ -0.27
UPF3AP3-201ENST00000420996 DNAH9Q9NYC9 4486 aa13.37□□□□□ -0.27
UPF3AP3-201ENST00000420996 TENM3Q9P273 2699 aa13.36□□□□□ -0.27
UPF3AP3-201ENST00000420996 ODAMA1E959 279 aa13.36□□□□□ -0.27
UPF3AP3-201ENST00000420996 MITFO75030 526 aaPredicted RBP13.36□□□□□ -0.27
UPF3AP3-201ENST00000420996 CSN2P05814 226 aa13.36□□□□□ -0.27
UPF3AP3-201ENST00000420996 UBCP0CG48 685 aaKnown RBP13.36□□□□□ -0.27
UPF3AP3-201ENST00000420996 ATF1P18846 271 aa13.36□□□□□ -0.27
UPF3AP3-201ENST00000420996 SLC6A1P30531 599 aa13.36□□□□□ -0.27
UPF3AP3-201ENST00000420996 PTGFRP43088 359 aa13.36□□□□□ -0.27
UPF3AP3-201ENST00000420996 UNQ9370/PRO34162Q6UXP9 181 aa13.36□□□□□ -0.27
UPF3AP3-201ENST00000420996 LHFPL2Q6ZUX7 228 aa13.36□□□□□ -0.27
UPF3AP3-201ENST00000420996 UTS2BQ765I0 119 aa13.36□□□□□ -0.27
UPF3AP3-201ENST00000420996 RDH10Q8IZV5 341 aa13.36□□□□□ -0.27
UPF3AP3-201ENST00000420996 COMMD4Q9H0A8 199 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms