RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 FAM168AQ92567 244 aa10.43□□□□□ -0.74
TMEM53-206ENST00000420706 SDSLQ96GA7 329 aa10.43□□□□□ -0.74
TMEM53-206ENST00000420706 CCL13Q99616 98 aa10.43□□□□□ -0.74
TMEM53-206ENST00000420706 DNTTIP1Q9H147 329 aa10.43□□□□□ -0.74
TMEM53-206ENST00000420706 ZNF665Q9H7R5 613 aa10.43□□□□□ -0.74
TMEM53-206ENST00000420706 IFT22Q9H7X7 185 aa10.43□□□□□ -0.74
TMEM53-206ENST00000420706 DIABLOQ9NR28 239 aa10.43□□□□□ -0.74
TMEM53-206ENST00000420706 ADAM30Q9UKF2 790 aa10.43□□□□□ -0.74
TMEM53-206ENST00000420706 MAB21L2Q9Y586 359 aa10.43□□□□□ -0.74
TMEM53-206ENST00000420706 A0A0A6YYH2 397 aa10.42□□□□□ -0.74
TMEM53-206ENST00000420706 TRAV24A0A0B4J272 114 aa10.42□□□□□ -0.74
TMEM53-206ENST00000420706 ISPDA4D126 451 aa10.42□□□□□ -0.74
TMEM53-206ENST00000420706 A6NJ64 397 aa10.42□□□□□ -0.74
TMEM53-206ENST00000420706 VWC2LB2RUY7 222 aa10.42□□□□□ -0.74
TMEM53-206ENST00000420706 SIRPB1O00241 398 aa10.42□□□□□ -0.74
TMEM53-206ENST00000420706 XRCC3O43542 346 aa10.42□□□□□ -0.74
TMEM53-206ENST00000420706 OR7C1O76099 320 aaPredicted RBP10.42□□□□□ -0.74
TMEM53-206ENST00000420706 ZNF44P15621 663 aa10.42□□□□□ -0.74
TMEM53-206ENST00000420706 FUT3P21217 361 aa10.42□□□□□ -0.74
TMEM53-206ENST00000420706 CDK2P24941 298 aa10.42□□□□□ -0.74
TMEM53-206ENST00000420706 DSCR9P59020 149 aa10.42□□□□□ -0.74
TMEM53-206ENST00000420706 COL10A1Q03692 680 aa10.42□□□□□ -0.74
TMEM53-206ENST00000420706 CLEC12BQ2HXU8 276 aa10.42□□□□□ -0.74
TMEM53-206ENST00000420706 PLAC9Q5JTB6 97 aa10.42□□□□□ -0.74
TMEM53-206ENST00000420706 ATAD3CQ5T2N8 411 aa10.42□□□□□ -0.74
TMEM53-206ENST00000420706 RAB12Q6IQ22 244 aa10.42□□□□□ -0.74
TMEM53-206ENST00000420706 CLEC2AQ6UVW9 174 aa10.42□□□□□ -0.74
TMEM53-206ENST00000420706 DCDC5Q6ZRR9 648 aa10.42□□□□□ -0.74
TMEM53-206ENST00000420706 OR4M1Q8NGD0 313 aa10.42□□□□□ -0.74
TMEM53-206ENST00000420706 DIRAS2Q96HU8 199 aa10.42□□□□□ -0.74
TMEM53-206ENST00000420706 CYYR1Q96J86 154 aa10.42□□□□□ -0.74
TMEM53-206ENST00000420706 WDFY2Q96P53 400 aa10.42□□□□□ -0.74
TMEM53-206ENST00000420706 GAFA1Q96PS6 74 aa10.42□□□□□ -0.74
TMEM53-206ENST00000420706 NEDD4LQ96PU5 975 aa10.42□□□□□ -0.74
TMEM53-206ENST00000420706 NUDT16L1Q9BRJ7 211 aaKnown RBP10.42□□□□□ -0.74
TMEM53-206ENST00000420706 PECRQ9BY49 303 aa10.42□□□□□ -0.74
TMEM53-206ENST00000420706 BPESC1Q9GZL8 116 aa10.42□□□□□ -0.74
TMEM53-206ENST00000420706 RCC2Q9P258 522 aaKnown RBP10.42□□□□□ -0.74
TMEM53-206ENST00000420706 KAAG1Q9UBP8 84 aa10.42□□□□□ -0.74
TMEM53-206ENST00000420706 EXTL2Q9UBQ6 330 aa10.42□□□□□ -0.74
TMEM53-206ENST00000420706 TRAV18A0A075B6X5 111 aa10.41□□□□□ -0.74
TMEM53-206ENST00000420706 A0A1B0GW55 424 aa10.41□□□□□ -0.74
TMEM53-206ENST00000420706 TMEM82A0PJX8 343 aa10.41□□□□□ -0.74
TMEM53-206ENST00000420706 H3BUI4 141 aa10.41□□□□□ -0.74
TMEM53-206ENST00000420706 SLC33A1O00400 549 aaPredicted RBP10.41□□□□□ -0.74
TMEM53-206ENST00000420706 SIGLEC5O15389 551 aa10.41□□□□□ -0.74
TMEM53-206ENST00000420706 PDCD6O75340 191 aa10.41□□□□□ -0.74
TMEM53-206ENST00000420706 ZNF737O75373 536 aa10.41□□□□□ -0.74
TMEM53-206ENST00000420706 SCGNO76038 276 aa10.41□□□□□ -0.74
TMEM53-206ENST00000420706 DUX4L2P0CJ85 424 aa10.41□□□□□ -0.74
TMEM53-206ENST00000420706 DUX4L3P0CJ86 424 aa10.41□□□□□ -0.74
TMEM53-206ENST00000420706 DUX4L4P0CJ87 422 aa10.41□□□□□ -0.74
TMEM53-206ENST00000420706 DUX4L5P0CJ88 424 aa10.41□□□□□ -0.74
TMEM53-206ENST00000420706 DUX4L6P0CJ89 424 aa10.41□□□□□ -0.74
TMEM53-206ENST00000420706 DUX4L7P0CJ90 424 aa10.41□□□□□ -0.74
TMEM53-206ENST00000420706 CHATP28329 748 aa10.41□□□□□ -0.74
TMEM53-206ENST00000420706 ZNF260Q3ZCT1 412 aa10.41□□□□□ -0.74
TMEM53-206ENST00000420706 NKAPLQ5M9Q1 402 aa10.41□□□□□ -0.74
TMEM53-206ENST00000420706 CNIH2Q6PI25 160 aa10.41□□□□□ -0.74
TMEM53-206ENST00000420706 BRICD5Q6PL45 260 aa10.41□□□□□ -0.74
TMEM53-206ENST00000420706 DUX4L9Q6RFH8 374 aaPredicted RBP10.41□□□□□ -0.74
TMEM53-206ENST00000420706 PRSS57Q6UWY2 283 aa10.41□□□□□ -0.74
TMEM53-206ENST00000420706 LINC00299Q6ZSB3 139 aa10.41□□□□□ -0.74
TMEM53-206ENST00000420706 C6orf201Q7Z4U5 140 aa10.41□□□□□ -0.74
TMEM53-206ENST00000420706 CCDC190Q86UF4 302 aa10.41□□□□□ -0.74
TMEM53-206ENST00000420706 RTN4RL2Q86UN3 420 aa10.41□□□□□ -0.74
TMEM53-206ENST00000420706 IZUMO1Q8IYV9 350 aa10.41□□□□□ -0.74
TMEM53-206ENST00000420706 ZNF561Q8N587 486 aa10.41□□□□□ -0.74
TMEM53-206ENST00000420706 SUMF2Q8NBJ7 301 aa10.41□□□□□ -0.74
TMEM53-206ENST00000420706 CHST4Q8NCG5 386 aa10.41□□□□□ -0.74
TMEM53-206ENST00000420706 PHF21AQ96BD5 680 aa10.41□□□□□ -0.74
TMEM53-206ENST00000420706 MED30Q96HR3 178 aa10.41□□□□□ -0.74
TMEM53-206ENST00000420706 ARHGAP5-AS1Q96IT6 56 aa10.41□□□□□ -0.74
TMEM53-206ENST00000420706 SNX22Q96L94 193 aa10.41□□□□□ -0.74
TMEM53-206ENST00000420706 SOSTQ9BQB4 213 aa10.41□□□□□ -0.74
TMEM53-206ENST00000420706 PIMREGQ9BSJ6 248 aa10.41□□□□□ -0.74
TMEM53-206ENST00000420706 SHARPINQ9H0F6 387 aa10.41□□□□□ -0.74
TMEM53-206ENST00000420706 SPACA1Q9HBV2 294 aa10.41□□□□□ -0.74
TMEM53-206ENST00000420706 PLEKHJ1Q9NW61 149 aa10.41□□□□□ -0.74
TMEM53-206ENST00000420706 DUX4Q9UBX2 424 aa10.41□□□□□ -0.74
TMEM53-206ENST00000420706 HSF4Q9ULV5 492 aa10.41□□□□□ -0.74
TMEM53-206ENST00000420706 ARID1AO14497 2285 aa10.4□□□□□ -0.74
TMEM53-206ENST00000420706 SETXQ7Z333 2677 aaKnown RBP10.4□□□□□ -0.74
TMEM53-206ENST00000420706 IGHV4-30-2A0A087WSY4 118 aa10.4□□□□□ -0.74
TMEM53-206ENST00000420706 CEACAM18A8MTB9 384 aa10.4□□□□□ -0.74
TMEM53-206ENST00000420706 ADAM20O43506 726 aa10.4□□□□□ -0.74
TMEM53-206ENST00000420706 PSPNO60542 156 aa10.4□□□□□ -0.74
TMEM53-206ENST00000420706 HLA-DQB1P01920 261 aa10.4□□□□□ -0.74
TMEM53-206ENST00000420706 GLAP06280 429 aa10.4□□□□□ -0.74
TMEM53-206ENST00000420706 WNT2P09544 360 aa10.4□□□□□ -0.74
TMEM53-206ENST00000420706 NR4A2P43354 598 aa10.4□□□□□ -0.74
TMEM53-206ENST00000420706 CDNFQ49AH0 187 aa10.4□□□□□ -0.74
TMEM53-206ENST00000420706 C17orf107Q6ZR85 190 aa10.4□□□□□ -0.74
TMEM53-206ENST00000420706 SLC36A1Q7Z2H8 476 aa10.4□□□□□ -0.74
TMEM53-206ENST00000420706 BPIFB2Q8N4F0 458 aa10.4□□□□□ -0.74
TMEM53-206ENST00000420706 SPICQ8N5J4 248 aa10.4□□□□□ -0.74
TMEM53-206ENST00000420706 FAM216BQ8N7L0 139 aa10.4□□□□□ -0.74
TMEM53-206ENST00000420706 ZNRF1Q8ND25 227 aa10.4□□□□□ -0.74
TMEM53-206ENST00000420706 OR4S1Q8NGB4 309 aa10.4□□□□□ -0.74
TMEM53-206ENST00000420706 RAB3CQ96E17 227 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms