RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 TSPAN15O95858 294 aa20.48■□□□□ 0.87
VEGFA-208ENST00000417285 DUSP1P28562 367 aa20.48■□□□□ 0.87
VEGFA-208ENST00000417285 ERP29P30040 261 aaKnown RBP20.48■□□□□ 0.87
VEGFA-208ENST00000417285 LPCAT4Q643R3 524 aa20.48■□□□□ 0.87
VEGFA-208ENST00000417285 OR5AK2Q8NH90 309 aa20.48■□□□□ 0.87
VEGFA-208ENST00000417285 RPS4Y2Q8TD47 263 aa20.48■□□□□ 0.87
VEGFA-208ENST00000417285 APH1BQ8WW43 257 aa20.48■□□□□ 0.87
VEGFA-208ENST00000417285 ZNF649Q9BS31 505 aa20.48■□□□□ 0.87
VEGFA-208ENST00000417285 CHST6Q9GZX3 395 aa20.48■□□□□ 0.87
VEGFA-208ENST00000417285 RHOFQ9HBH0 211 aa20.48■□□□□ 0.87
VEGFA-208ENST00000417285 HMG20AQ9NP66 347 aa20.48■□□□□ 0.87
VEGFA-208ENST00000417285 PCDHGB5Q9Y5G0 923 aa20.48■□□□□ 0.87
VEGFA-208ENST00000417285 H3BUI4 141 aa20.47■□□□□ 0.87
VEGFA-208ENST00000417285 SH2D1BO14796 132 aa20.47■□□□□ 0.87
VEGFA-208ENST00000417285 ZFPL1O95159 310 aa20.47■□□□□ 0.87
VEGFA-208ENST00000417285 CALCBP10092 127 aa20.47■□□□□ 0.87
VEGFA-208ENST00000417285 DYNLT3P51808 116 aa20.47■□□□□ 0.87
VEGFA-208ENST00000417285 SNU13P55769 128 aaKnown RBP20.47■□□□□ 0.87
VEGFA-208ENST00000417285 DYNC1I2Q13409 638 aaKnown RBP20.47■□□□□ 0.87
VEGFA-208ENST00000417285 FAM189A2Q15884 450 aa20.47■□□□□ 0.87
VEGFA-208ENST00000417285 SSX2Q16385 188 aa20.47■□□□□ 0.87
VEGFA-208ENST00000417285 MINOS1Q5TGZ0 78 aa20.47■□□□□ 0.87
VEGFA-208ENST00000417285 SERPINA12Q8IW75 414 aa20.47■□□□□ 0.87
VEGFA-208ENST00000417285 DYNAPQ8N1N2 210 aa20.47■□□□□ 0.87
VEGFA-208ENST00000417285 OR52N4Q8NGI2 321 aa20.47■□□□□ 0.87
VEGFA-208ENST00000417285 OR5D14Q8NGL3 314 aa20.47■□□□□ 0.87
VEGFA-208ENST00000417285 CFHR4Q92496 578 aa20.47■□□□□ 0.87
VEGFA-208ENST00000417285 SPACA5Q96QH8 159 aa20.47■□□□□ 0.87
VEGFA-208ENST00000417285 EXOSC4Q9NPD3 245 aaKnown RBP20.47■□□□□ 0.87
VEGFA-208ENST00000417285 DHDHQ9UQ10 334 aa20.47■□□□□ 0.87
VEGFA-208ENST00000417285 TCF19Q9Y242 345 aa20.47■□□□□ 0.87
VEGFA-208ENST00000417285 GSTK1Q9Y2Q3 226 aa20.47■□□□□ 0.87
VEGFA-208ENST00000417285 MINOS1-NBL1R4GNA1 71 aa20.47■□□□□ 0.87
VEGFA-208ENST00000417285 MEX3AA1L020 520 aaKnown RBP20.46■□□□□ 0.87
VEGFA-208ENST00000417285 CHST1O43916 411 aa20.46■□□□□ 0.87
VEGFA-208ENST00000417285 PSPNO60542 156 aa20.46■□□□□ 0.87
VEGFA-208ENST00000417285 KDM4BO94953 1096 aa20.46■□□□□ 0.87
VEGFA-208ENST00000417285 ALX3O95076 343 aa20.46■□□□□ 0.87
VEGFA-208ENST00000417285 HCKP08631 526 aa20.46■□□□□ 0.87
VEGFA-208ENST00000417285 RAB13P51153 203 aa20.46■□□□□ 0.87
VEGFA-208ENST00000417285 SAXO1Q8IYX7 474 aa20.46■□□□□ 0.87
VEGFA-208ENST00000417285 TSEN15Q8WW01 171 aaKnown RBP20.46■□□□□ 0.87
VEGFA-208ENST00000417285 UBE2J1Q9Y385 318 aaPredicted RBP20.46■□□□□ 0.87
VEGFA-208ENST00000417285 SESN1Q9Y6P5 492 aa20.46■□□□□ 0.87
VEGFA-208ENST00000417285 FUOMA2VDF0 154 aa20.45■□□□□ 0.86
VEGFA-208ENST00000417285 E9PI62 339 aa20.45■□□□□ 0.86
VEGFA-208ENST00000417285 TCF23Q7RTU1 214 aa20.45■□□□□ 0.86
VEGFA-208ENST00000417285 PARP16Q8N5Y8 322 aa20.45■□□□□ 0.86
VEGFA-208ENST00000417285 KLHDC1Q8N7A1 406 aa20.45■□□□□ 0.86
VEGFA-208ENST00000417285 TPRX1Q8N7U7 411 aa20.45■□□□□ 0.86
VEGFA-208ENST00000417285 OR4S1Q8NGB4 309 aa20.45■□□□□ 0.86
VEGFA-208ENST00000417285 OR5D18Q8NGL1 313 aa20.45■□□□□ 0.86
VEGFA-208ENST00000417285 NKX3-1Q99801 234 aaPredicted RBP20.45■□□□□ 0.86
VEGFA-208ENST00000417285 PDCD1LG2Q9BQ51 273 aa20.45■□□□□ 0.86
VEGFA-208ENST00000417285 JAM3Q9BX67 310 aa20.45■□□□□ 0.86
VEGFA-208ENST00000417285 IGKV1-12A0A0C4DH73 117 aa20.44■□□□□ 0.86
VEGFA-208ENST00000417285 A6NDX4 124 aa20.44■□□□□ 0.86
VEGFA-208ENST00000417285 SIRPB1O00241 398 aa20.44■□□□□ 0.86
VEGFA-208ENST00000417285 SULT1B1O43704 296 aa20.44■□□□□ 0.86
VEGFA-208ENST00000417285 IGKV1D-12P01611 117 aa20.44■□□□□ 0.86
VEGFA-208ENST00000417285 P2RX3P56373 397 aa20.44■□□□□ 0.86
VEGFA-208ENST00000417285 PLA1AQ53H76 456 aa20.44■□□□□ 0.86
VEGFA-208ENST00000417285 Q8N2B8 174 aa20.44■□□□□ 0.86
VEGFA-208ENST00000417285 CPNE2Q96FN4 548 aaPredicted RBP20.44■□□□□ 0.86
VEGFA-208ENST00000417285 TMEM133Q9H2Q1 129 aa20.44■□□□□ 0.86
VEGFA-208ENST00000417285 FGF20Q9NP95 211 aaPredicted RBP20.44■□□□□ 0.86
VEGFA-208ENST00000417285 FOXJ3Q9UPW0 622 aa20.44■□□□□ 0.86
VEGFA-208ENST00000417285 IRGMA1A4Y4 181 aa20.43■□□□□ 0.86
VEGFA-208ENST00000417285 WBP4O75554 376 aaKnown RBP20.43■□□□□ 0.86
VEGFA-208ENST00000417285 OR2H2O95918 312 aa20.43■□□□□ 0.86
VEGFA-208ENST00000417285 LIMS3P0CW19 117 aa20.43■□□□□ 0.86
VEGFA-208ENST00000417285 LIMS4P0CW20 117 aa20.43■□□□□ 0.86
VEGFA-208ENST00000417285 LMO1P25800 156 aa20.43■□□□□ 0.86
VEGFA-208ENST00000417285 DCKP27707 260 aa20.43■□□□□ 0.86
VEGFA-208ENST00000417285 OR3A1P47881 315 aa20.43■□□□□ 0.86
VEGFA-208ENST00000417285 KISS1Q15726 138 aa20.43■□□□□ 0.86
VEGFA-208ENST00000417285 SMN1Q16637 294 aaKnown RBP20.43■□□□□ 0.86
VEGFA-208ENST00000417285 OR52W1Q6IF63 320 aa20.43■□□□□ 0.86
VEGFA-208ENST00000417285 CCBE1Q6UXH8 406 aaPredicted RBP20.43■□□□□ 0.86
VEGFA-208ENST00000417285 RNF144BQ7Z419 303 aa20.43■□□□□ 0.86
VEGFA-208ENST00000417285 TRAPPC6BQ86SZ2 158 aa20.43■□□□□ 0.86
VEGFA-208ENST00000417285 CLEC7AQ9BXN2 247 aa20.43■□□□□ 0.86
VEGFA-208ENST00000417285 PRSS22Q9GZN4 317 aa20.43■□□□□ 0.86
VEGFA-208ENST00000417285 C8orf4Q9NR00 106 aa20.43■□□□□ 0.86
VEGFA-208ENST00000417285 IGHV2-26A0A0B4J1V2 119 aa20.42■□□□□ 0.86
VEGFA-208ENST00000417285 MEGF11A6BM72 1044 aa20.42■□□□□ 0.86
VEGFA-208ENST00000417285 TMEM225BP0DP42 221 aa20.42■□□□□ 0.86
VEGFA-208ENST00000417285 VSIG10L2P0DP72 767 aa20.42■□□□□ 0.86
VEGFA-208ENST00000417285 LDLRAD2Q5SZI1 272 aa20.42■□□□□ 0.86
VEGFA-208ENST00000417285 ZNF691Q5VV52 312 aa20.42■□□□□ 0.86
VEGFA-208ENST00000417285 CORO2AQ92828 525 aa20.42■□□□□ 0.86
VEGFA-208ENST00000417285 GAL3ST2Q9H3Q3 398 aa20.42■□□□□ 0.86
VEGFA-208ENST00000417285 HILPDAQ9Y5L2 63 aa20.42■□□□□ 0.86
VEGFA-208ENST00000417285 TRGV10A0A0A0MS01 117 aa20.41■□□□□ 0.86
VEGFA-208ENST00000417285 MAGEB3O15480 346 aa20.41■□□□□ 0.86
VEGFA-208ENST00000417285 ZNF44P15621 663 aa20.41■□□□□ 0.86
VEGFA-208ENST00000417285 IL18R1Q13478 541 aa20.41■□□□□ 0.86
VEGFA-208ENST00000417285 CCDC58Q4VC31 144 aa20.41■□□□□ 0.86
VEGFA-208ENST00000417285 TTC23Q5W5X9 447 aa20.41■□□□□ 0.86
VEGFA-208ENST00000417285 TMPRSS11AQ6ZMR5 421 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms