RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 EXOSC1Q9Y3B2 195 aaKnown RBP12.71□□□□□ -0.37
ITGB1-204ENST00000417122 PCDHGB5Q9Y5G0 923 aa12.71□□□□□ -0.37
ITGB1-204ENST00000417122 ANKRD65E5RJM6 399 aa12.7□□□□□ -0.38
ITGB1-204ENST00000417122 H3BUX3 64 aa12.7□□□□□ -0.38
ITGB1-204ENST00000417122 MGST3O14880 152 aa12.7□□□□□ -0.38
ITGB1-204ENST00000417122 CASQ2O14958 399 aaPredicted RBP12.7□□□□□ -0.38
ITGB1-204ENST00000417122 OR2H2O95918 312 aa12.7□□□□□ -0.38
ITGB1-204ENST00000417122 IGHV1-8P0DP01 117 aa12.7□□□□□ -0.38
ITGB1-204ENST00000417122 TMEM225BP0DP42 221 aa12.7□□□□□ -0.38
ITGB1-204ENST00000417122 RAB3AP20336 220 aa12.7□□□□□ -0.38
ITGB1-204ENST00000417122 CAPGP40121 348 aa12.7□□□□□ -0.38
ITGB1-204ENST00000417122 OR3A1P47881 315 aa12.7□□□□□ -0.38
ITGB1-204ENST00000417122 ZP1P60852 638 aa12.7□□□□□ -0.38
ITGB1-204ENST00000417122 MED21Q13503 144 aa12.7□□□□□ -0.38
ITGB1-204ENST00000417122 LRRC75BQ2VPJ9 315 aa12.7□□□□□ -0.38
ITGB1-204ENST00000417122 Q6ZSV7 163 aa12.7□□□□□ -0.38
ITGB1-204ENST00000417122 OR13D1Q8NGV5 346 aa12.7□□□□□ -0.38
ITGB1-204ENST00000417122 LINC01006Q8NI28 216 aa12.7□□□□□ -0.38
ITGB1-204ENST00000417122 RPS4Y2Q8TD47 263 aa12.7□□□□□ -0.38
ITGB1-204ENST00000417122 WFDC12Q8WWY7 111 aa12.7□□□□□ -0.38
ITGB1-204ENST00000417122 CPNE2Q96FN4 548 aaPredicted RBP12.7□□□□□ -0.38
ITGB1-204ENST00000417122 ZNF696Q9H7X3 374 aa12.7□□□□□ -0.38
ITGB1-204ENST00000417122 CHCHD3Q9NX63 227 aaKnown RBP12.7□□□□□ -0.38
ITGB1-204ENST00000417122 BABAM2Q9NXR7 383 aa12.7□□□□□ -0.38
ITGB1-204ENST00000417122 CLEC2DQ9UHP7 191 aa12.7□□□□□ -0.38
ITGB1-204ENST00000417122 RNF114Q9Y508 228 aa12.7□□□□□ -0.38
ITGB1-204ENST00000417122 LINC00312Q9Y6C7 94 aa12.7□□□□□ -0.38
ITGB1-204ENST00000417122 HSPE1-MOB4S4R3N1 261 aa12.7□□□□□ -0.38
ITGB1-204ENST00000417122 MAGEB3O15480 346 aa12.69□□□□□ -0.38
ITGB1-204ENST00000417122 OGG1O15527 345 aa12.69□□□□□ -0.38
ITGB1-204ENST00000417122 ARG1P05089 322 aa12.69□□□□□ -0.38
ITGB1-204ENST00000417122 CD2P06729 351 aa12.69□□□□□ -0.38
ITGB1-204ENST00000417122 ZNF44P15621 663 aa12.69□□□□□ -0.38
ITGB1-204ENST00000417122 LMO1P25800 156 aa12.69□□□□□ -0.38
ITGB1-204ENST00000417122 PAX6P26367 422 aa12.69□□□□□ -0.38
ITGB1-204ENST00000417122 ERP29P30040 261 aaKnown RBP12.69□□□□□ -0.38
ITGB1-204ENST00000417122 TGFBR2P37173 567 aa12.69□□□□□ -0.38
ITGB1-204ENST00000417122 SCN1BQ07699 218 aa12.69□□□□□ -0.38
ITGB1-204ENST00000417122 PRR31Q5SQ13 230 aa12.69□□□□□ -0.38
ITGB1-204ENST00000417122 ZNF529Q6P280 563 aa12.69□□□□□ -0.38
ITGB1-204ENST00000417122 C8orf59Q8N0T1 100 aaPredicted RBP12.69□□□□□ -0.38
ITGB1-204ENST00000417122 OR51A2Q8NGJ7 313 aa12.69□□□□□ -0.38
ITGB1-204ENST00000417122 GGHQ92820 318 aa12.69□□□□□ -0.38
ITGB1-204ENST00000417122 TMEM106AQ96A25 262 aa12.69□□□□□ -0.38
ITGB1-204ENST00000417122 GPER1Q99527 375 aa12.69□□□□□ -0.38
ITGB1-204ENST00000417122 TAS2R4Q9NYW5 299 aa12.69□□□□□ -0.38
ITGB1-204ENST00000417122 SIRT4Q9Y6E7 314 aaPredicted RBP12.69□□□□□ -0.38
ITGB1-204ENST00000417122 FAM90A8PA6NJQ4 464 aa12.68□□□□□ -0.38
ITGB1-204ENST00000417122 GNAO1P09471 354 aa12.68□□□□□ -0.38
ITGB1-204ENST00000417122 P2RX3P56373 397 aa12.68□□□□□ -0.38
ITGB1-204ENST00000417122 SRSF4Q08170 494 aaKnown RBP12.68□□□□□ -0.38
ITGB1-204ENST00000417122 ST3GAL4Q11206 333 aa12.68□□□□□ -0.38
ITGB1-204ENST00000417122 LY6EQ16553 131 aa12.68□□□□□ -0.38
ITGB1-204ENST00000417122 AANATQ16613 207 aa12.68□□□□□ -0.38
ITGB1-204ENST00000417122 ASPHD2Q6ICH7 369 aa12.68□□□□□ -0.38
ITGB1-204ENST00000417122 LHFPL4Q7Z7J7 247 aa12.68□□□□□ -0.38
ITGB1-204ENST00000417122 TRAPPC6BQ86SZ2 158 aa12.68□□□□□ -0.38
ITGB1-204ENST00000417122 SATL1Q86VE3 508 aa12.68□□□□□ -0.38
ITGB1-204ENST00000417122 PXT1Q8NFP0 134 aa12.68□□□□□ -0.38
ITGB1-204ENST00000417122 OR11H6Q8NGC7 330 aa12.68□□□□□ -0.38
ITGB1-204ENST00000417122 OR52N1Q8NH53 320 aa12.68□□□□□ -0.38
ITGB1-204ENST00000417122 SMIM19Q96E16 107 aa12.68□□□□□ -0.38
ITGB1-204ENST00000417122 PPA2Q9H2U2 334 aa12.68□□□□□ -0.38
ITGB1-204ENST00000417122 C16orf95Q9H693 158 aa12.68□□□□□ -0.38
ITGB1-204ENST00000417122 ZNF281Q9Y2X9 895 aa12.68□□□□□ -0.38
ITGB1-204ENST00000417122 UBE2J1Q9Y385 318 aaPredicted RBP12.68□□□□□ -0.38
ITGB1-204ENST00000417122 TBL2Q9Y4P3 447 aaKnown RBP12.68□□□□□ -0.38
ITGB1-204ENST00000417122 A0A0G2JK05 382 aa12.67□□□□□ -0.38
ITGB1-204ENST00000417122 FUOMA2VDF0 154 aa12.67□□□□□ -0.38
ITGB1-204ENST00000417122 ODF3BA8MYP8 253 aa12.67□□□□□ -0.38
ITGB1-204ENST00000417122 GABRPO00591 440 aa12.67□□□□□ -0.38
ITGB1-204ENST00000417122 DEGS1O15121 323 aa12.67□□□□□ -0.38
ITGB1-204ENST00000417122 TSPAN9O75954 239 aa12.67□□□□□ -0.38
ITGB1-204ENST00000417122 LALBAP00709 142 aa12.67□□□□□ -0.38
ITGB1-204ENST00000417122 MTNR1BP49286 362 aa12.67□□□□□ -0.38
ITGB1-204ENST00000417122 AESQ08117 197 aa12.67□□□□□ -0.38
ITGB1-204ENST00000417122 ZNF626Q68DY1 528 aa12.67□□□□□ -0.38
ITGB1-204ENST00000417122 Q6P435 159 aa12.67□□□□□ -0.38
ITGB1-204ENST00000417122 BRICD5Q6PL45 260 aa12.67□□□□□ -0.38
ITGB1-204ENST00000417122 CHST4Q8NCG5 386 aa12.67□□□□□ -0.38
ITGB1-204ENST00000417122 TNFAIP8L1Q8WVP5 186 aa12.67□□□□□ -0.38
ITGB1-204ENST00000417122 VCXQ9H320 206 aa12.67□□□□□ -0.38
ITGB1-204ENST00000417122 CNOT2Q9NZN8 540 aaKnown RBP12.67□□□□□ -0.38
ITGB1-204ENST00000417122 SESN1Q9Y6P5 492 aa12.67□□□□□ -0.38
ITGB1-204ENST00000417122 TRGV10A0A0A0MS01 117 aa12.66□□□□□ -0.38
ITGB1-204ENST00000417122 EFCAB10A6NFE3 127 aa12.66□□□□□ -0.38
ITGB1-204ENST00000417122 SLC33A1O00400 549 aaPredicted RBP12.66□□□□□ -0.38
ITGB1-204ENST00000417122 CLPXO76031 633 aa12.66□□□□□ -0.38
ITGB1-204ENST00000417122 ALDOBP05062 364 aa12.66□□□□□ -0.38
ITGB1-204ENST00000417122 CSN2P05814 226 aa12.66□□□□□ -0.38
ITGB1-204ENST00000417122 GLIPR1P48060 266 aa12.66□□□□□ -0.38
ITGB1-204ENST00000417122 PROK1P58294 105 aa12.66□□□□□ -0.38
ITGB1-204ENST00000417122 DYNC1I2Q13409 638 aaKnown RBP12.66□□□□□ -0.38
ITGB1-204ENST00000417122 DMKNQ6E0U4 476 aaPredicted RBP12.66□□□□□ -0.38
ITGB1-204ENST00000417122 ELP2Q6IA86 826 aa12.66□□□□□ -0.38
ITGB1-204ENST00000417122 LAIR2Q6ISS4 152 aa12.66□□□□□ -0.38
ITGB1-204ENST00000417122 DYNAPQ8N1N2 210 aa12.66□□□□□ -0.38
ITGB1-204ENST00000417122 ZNF485Q8NCK3 441 aa12.66□□□□□ -0.38
ITGB1-204ENST00000417122 OR13C5Q8NGS8 318 aa12.66□□□□□ -0.38
ITGB1-204ENST00000417122 CORO2AQ92828 525 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms