RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 KLHDC1Q8N7A1 406 aa10.51□□□□□ -0.73
LINC00339-202ENST00000416769 SPERTQ8NA61 448 aa10.51□□□□□ -0.73
LINC00339-202ENST00000416769 OR1M1Q8NGA1 313 aa10.51□□□□□ -0.73
LINC00339-202ENST00000416769 OR5D14Q8NGL3 314 aa10.51□□□□□ -0.73
LINC00339-202ENST00000416769 OR13C5Q8NGS8 318 aa10.51□□□□□ -0.73
LINC00339-202ENST00000416769 H1FXQ92522 213 aaKnown RBP10.51□□□□□ -0.73
LINC00339-202ENST00000416769 TMEM106AQ96A25 262 aa10.51□□□□□ -0.73
LINC00339-202ENST00000416769 ADAT3Q96EY9 351 aaPredicted RBP10.51□□□□□ -0.73
LINC00339-202ENST00000416769 DCTN5Q9BTE1 182 aa10.51□□□□□ -0.73
LINC00339-202ENST00000416769 PLEKHA1Q9HB21 404 aa10.51□□□□□ -0.73
LINC00339-202ENST00000416769 ABCB9Q9NP78 766 aa10.51□□□□□ -0.73
LINC00339-202ENST00000416769 STUB1Q9UNE7 303 aa10.51□□□□□ -0.73
LINC00339-202ENST00000416769 SSR3Q9UNL2 185 aa10.51□□□□□ -0.73
LINC00339-202ENST00000416769 NOP16Q9Y3C1 178 aaKnown RBP10.51□□□□□ -0.73
LINC00339-202ENST00000416769 RHBDD3Q9Y3P4 386 aa10.51□□□□□ -0.73
LINC00339-202ENST00000416769 A6NIN4 97 aa10.5□□□□□ -0.73
LINC00339-202ENST00000416769 ZNF850A8MQ14 1090 aa10.5□□□□□ -0.73
LINC00339-202ENST00000416769 GABRPO00591 440 aa10.5□□□□□ -0.73
LINC00339-202ENST00000416769 CDIPTO14735 213 aa10.5□□□□□ -0.73
LINC00339-202ENST00000416769 NDUFA2O43678 99 aa10.5□□□□□ -0.73
LINC00339-202ENST00000416769 ECDO95905 644 aaPredicted RBP10.5□□□□□ -0.73
LINC00339-202ENST00000416769 NRASP01111 189 aa10.5□□□□□ -0.73
LINC00339-202ENST00000416769 FGF9P31371 208 aaPredicted RBP10.5□□□□□ -0.73
LINC00339-202ENST00000416769 GNALP38405 381 aa10.5□□□□□ -0.73
LINC00339-202ENST00000416769 ERVFRD-1P60508 538 aa10.5□□□□□ -0.73
LINC00339-202ENST00000416769 HABP2Q14520 560 aaPredicted RBP10.5□□□□□ -0.73
LINC00339-202ENST00000416769 TIMM50Q3ZCQ8 353 aa10.5□□□□□ -0.73
LINC00339-202ENST00000416769 STUMQ69YW2 141 aa10.5□□□□□ -0.73
LINC00339-202ENST00000416769 METAP1DQ6UB28 335 aaPredicted RBP10.5□□□□□ -0.73
LINC00339-202ENST00000416769 MOB3CQ70IA8 216 aa10.5□□□□□ -0.73
LINC00339-202ENST00000416769 UTS2BQ765I0 119 aa10.5□□□□□ -0.73
LINC00339-202ENST00000416769 RPL3LQ92901 407 aaKnown RBP10.5□□□□□ -0.73
LINC00339-202ENST00000416769 GAFA1Q96PS6 74 aa10.5□□□□□ -0.73
LINC00339-202ENST00000416769 DERL3Q96Q80 235 aa10.5□□□□□ -0.73
LINC00339-202ENST00000416769 HIST1H2AAQ96QV6 131 aa10.5□□□□□ -0.73
LINC00339-202ENST00000416769 OR14A2Q96R54 314 aa10.5□□□□□ -0.73
LINC00339-202ENST00000416769 CHST5Q9GZS9 411 aa10.5□□□□□ -0.73
LINC00339-202ENST00000416769 ZCCHC4Q9H5U6 513 aa10.5□□□□□ -0.73
LINC00339-202ENST00000416769 BTBD17A6NE02 478 aa10.49□□□□□ -0.73
LINC00339-202ENST00000416769 UCHL1P09936 223 aa10.49□□□□□ -0.73
LINC00339-202ENST00000416769 IGFBP3P17936 291 aaPredicted RBP10.49□□□□□ -0.73
LINC00339-202ENST00000416769 ATF1P18846 271 aa10.49□□□□□ -0.73
LINC00339-202ENST00000416769 GADD45AP24522 165 aa10.49□□□□□ -0.73
LINC00339-202ENST00000416769 MZT1Q08AG7 82 aa10.49□□□□□ -0.73
LINC00339-202ENST00000416769 PRDX4Q13162 271 aa10.49□□□□□ -0.73
LINC00339-202ENST00000416769 BLMHQ13867 455 aa10.49□□□□□ -0.73
LINC00339-202ENST00000416769 MICBQ29980 383 aa10.49□□□□□ -0.73
LINC00339-202ENST00000416769 CEACAM21Q3KPI0 293 aa10.49□□□□□ -0.73
LINC00339-202ENST00000416769 DMRTC1Q5HYR2 192 aa10.49□□□□□ -0.73
LINC00339-202ENST00000416769 ZNF529Q6P280 563 aa10.49□□□□□ -0.73
LINC00339-202ENST00000416769 ANKRD13BQ86YJ7 626 aa10.49□□□□□ -0.73
LINC00339-202ENST00000416769 OR5A2Q8NGI9 324 aa10.49□□□□□ -0.73
LINC00339-202ENST00000416769 OR8S1Q8NH09 359 aa10.49□□□□□ -0.73
LINC00339-202ENST00000416769 MRAPQ8TCY5 172 aa10.49□□□□□ -0.73
LINC00339-202ENST00000416769 CFHR4Q92496 578 aa10.49□□□□□ -0.73
LINC00339-202ENST00000416769 FUNDC2Q9BWH2 189 aa10.49□□□□□ -0.73
LINC00339-202ENST00000416769 PAPOLGQ9BWT3 736 aaKnown RBP10.49□□□□□ -0.73
LINC00339-202ENST00000416769 OR51E2Q9H255 320 aa10.49□□□□□ -0.73
LINC00339-202ENST00000416769 NEK6Q9HC98 313 aa10.49□□□□□ -0.73
LINC00339-202ENST00000416769 FBLN5Q9UBX5 448 aa10.49□□□□□ -0.73
LINC00339-202ENST00000416769 GSTK1Q9Y2Q3 226 aa10.49□□□□□ -0.73
LINC00339-202ENST00000416769 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.48□□□□□ -0.73
LINC00339-202ENST00000416769 A0A1W2PPK0 400 aa10.48□□□□□ -0.73
LINC00339-202ENST00000416769 ANXA2P2A6NMY6 339 aa10.48□□□□□ -0.73
LINC00339-202ENST00000416769 AKR7A2O43488 359 aa10.48□□□□□ -0.73
LINC00339-202ENST00000416769 NDUFB3O43676 98 aa10.48□□□□□ -0.73
LINC00339-202ENST00000416769 ARL6IP5O75915 188 aa10.48□□□□□ -0.73
LINC00339-202ENST00000416769 PAHP00439 452 aa10.48□□□□□ -0.73
LINC00339-202ENST00000416769 ALDOBP05062 364 aa10.48□□□□□ -0.73
LINC00339-202ENST00000416769 VSIG10L2P0DP72 767 aa10.48□□□□□ -0.73
LINC00339-202ENST00000416769 SRMP19623 302 aa10.48□□□□□ -0.73
LINC00339-202ENST00000416769 FSTP19883 344 aa10.48□□□□□ -0.73
LINC00339-202ENST00000416769 INSL4Q14641 139 aa10.48□□□□□ -0.73
LINC00339-202ENST00000416769 UBE2V2Q15819 145 aa10.48□□□□□ -0.73
LINC00339-202ENST00000416769 NSUN5P1Q3KNT7 163 aa10.48□□□□□ -0.73
LINC00339-202ENST00000416769 HSD17B12Q53GQ0 312 aa10.48□□□□□ -0.73
LINC00339-202ENST00000416769 CRIP3Q6Q6R5 217 aa10.48□□□□□ -0.73
LINC00339-202ENST00000416769 Q6ZTK2 550 aa10.48□□□□□ -0.73
LINC00339-202ENST00000416769 ZDHHC23Q8IYP9 409 aa10.48□□□□□ -0.73
LINC00339-202ENST00000416769 C8orf46Q8TAG6 207 aa10.48□□□□□ -0.73
LINC00339-202ENST00000416769 OR5P3Q8WZ94 311 aa10.48□□□□□ -0.73
LINC00339-202ENST00000416769 SSX3Q99909 188 aa10.48□□□□□ -0.73
LINC00339-202ENST00000416769 MICU1Q9BPX6 476 aa10.48□□□□□ -0.73
LINC00339-202ENST00000416769 PPIL3Q9H2H8 161 aaKnown RBP10.48□□□□□ -0.73
LINC00339-202ENST00000416769 EXOSC4Q9NPD3 245 aaKnown RBP10.48□□□□□ -0.73
LINC00339-202ENST00000416769 GPR173Q9NS66 373 aa10.48□□□□□ -0.73
LINC00339-202ENST00000416769 C14orf119Q9NWQ9 140 aa10.48□□□□□ -0.73
LINC00339-202ENST00000416769 AURKAIP1Q9NWT8 199 aaPredicted RBP10.48□□□□□ -0.73
LINC00339-202ENST00000416769 TXNL4BQ9NX01 149 aaKnown RBP10.48□□□□□ -0.73
LINC00339-202ENST00000416769 CKLFQ9UBR5 152 aa10.48□□□□□ -0.73
LINC00339-202ENST00000416769 SLC7A11Q9UPY5 501 aa10.48□□□□□ -0.73
LINC00339-202ENST00000416769 IGKV1-9A0A0C4DH69 117 aa10.47□□□□□ -0.73
LINC00339-202ENST00000416769 SULT1B1O43704 296 aa10.47□□□□□ -0.73
LINC00339-202ENST00000416769 AIREO43918 545 aa10.47□□□□□ -0.73
LINC00339-202ENST00000416769 CD28P10747 220 aa10.47□□□□□ -0.73
LINC00339-202ENST00000416769 MUC1P15941 1255 aaPredicted RBP10.47□□□□□ -0.73
LINC00339-202ENST00000416769 RAB3AP20336 220 aa10.47□□□□□ -0.73
LINC00339-202ENST00000416769 PRKACBP22694 351 aa10.47□□□□□ -0.73
LINC00339-202ENST00000416769 BMXP51813 675 aa10.47□□□□□ -0.73
LINC00339-202ENST00000416769 FUT6P51993 359 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms