RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 PF4V1P10720 104 aa11.56□□□□□ -0.56
PAF1-202ENST00000416728 FCGR1AP12314 374 aa11.56□□□□□ -0.56
PAF1-202ENST00000416728 ZNF20P17024 532 aa11.56□□□□□ -0.56
PAF1-202ENST00000416728 ATF1P18846 271 aa11.56□□□□□ -0.56
PAF1-202ENST00000416728 CD33P20138 364 aa11.56□□□□□ -0.56
PAF1-202ENST00000416728 BRS3P32247 399 aa11.56□□□□□ -0.56
PAF1-202ENST00000416728 ARHGDIBP52566 201 aa11.56□□□□□ -0.56
PAF1-202ENST00000416728 ISL1P61371 349 aa11.56□□□□□ -0.56
PAF1-202ENST00000416728 CD83Q01151 205 aa11.56□□□□□ -0.56
PAF1-202ENST00000416728 ZNF85Q03923 595 aa11.56□□□□□ -0.56
PAF1-202ENST00000416728 PRAMEF5Q5TYX0 476 aa11.56□□□□□ -0.56
PAF1-202ENST00000416728 TMEM244Q5VVB8 128 aa11.56□□□□□ -0.56
PAF1-202ENST00000416728 OR52W1Q6IF63 320 aa11.56□□□□□ -0.56
PAF1-202ENST00000416728 LHFPL2Q6ZUX7 228 aa11.56□□□□□ -0.56
PAF1-202ENST00000416728 UTS2BQ765I0 119 aa11.56□□□□□ -0.56
PAF1-202ENST00000416728 ABHD12Q8N2K0 398 aa11.56□□□□□ -0.56
PAF1-202ENST00000416728 ZNF596Q8TC21 504 aa11.56□□□□□ -0.56
PAF1-202ENST00000416728 STMN2Q93045 179 aa11.56□□□□□ -0.56
PAF1-202ENST00000416728 EME1Q96AY2 570 aa11.56□□□□□ -0.56
PAF1-202ENST00000416728 SPSB1Q96BD6 273 aa11.56□□□□□ -0.56
PAF1-202ENST00000416728 GABARAPL3Q9BY60 117 aa11.56□□□□□ -0.56
PAF1-202ENST00000416728 LIN7BQ9HAP6 207 aa11.56□□□□□ -0.56
PAF1-202ENST00000416728 EXOSC4Q9NPD3 245 aaKnown RBP11.56□□□□□ -0.56
PAF1-202ENST00000416728 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.56□□□□□ -0.56
PAF1-202ENST00000416728 DPM3Q9P2X0 92 aa11.56□□□□□ -0.56
PAF1-202ENST00000416728 FUOMA2VDF0 154 aa11.55□□□□□ -0.56
PAF1-202ENST00000416728 SH2D1BO14796 132 aa11.55□□□□□ -0.56
PAF1-202ENST00000416728 CDK2P24941 298 aa11.55□□□□□ -0.56
PAF1-202ENST00000416728 CD24P25063 80 aa11.55□□□□□ -0.56
PAF1-202ENST00000416728 BDH1Q02338 343 aa11.55□□□□□ -0.56
PAF1-202ENST00000416728 PDZK1IP1Q13113 114 aa11.55□□□□□ -0.56
PAF1-202ENST00000416728 FOXB2Q5VYV0 432 aa11.55□□□□□ -0.56
PAF1-202ENST00000416728 CENPVQ7Z7K6 275 aaPredicted RBP11.55□□□□□ -0.56
PAF1-202ENST00000416728 RTN4RL2Q86UN3 420 aa11.55□□□□□ -0.56
PAF1-202ENST00000416728 WFDC9Q8NEX5 89 aa11.55□□□□□ -0.56
PAF1-202ENST00000416728 OR2G2Q8NGZ5 317 aa11.55□□□□□ -0.56
PAF1-202ENST00000416728 FGGYQ96C11 551 aa11.55□□□□□ -0.56
PAF1-202ENST00000416728 OPALINQ96PE5 141 aa11.55□□□□□ -0.56
PAF1-202ENST00000416728 HMG20AQ9NP66 347 aa11.55□□□□□ -0.56
PAF1-202ENST00000416728 GSTK1Q9Y2Q3 226 aa11.55□□□□□ -0.56
PAF1-202ENST00000416728 PCDHGB5Q9Y5G0 923 aa11.55□□□□□ -0.56
PAF1-202ENST00000416728 LEUTXA8MZ59 168 aa11.54□□□□□ -0.56
PAF1-202ENST00000416728 OR2H2O95918 312 aa11.54□□□□□ -0.56
PAF1-202ENST00000416728 PF4P02776 101 aa11.54□□□□□ -0.56
PAF1-202ENST00000416728 IGLL1P15814 213 aa11.54□□□□□ -0.56
PAF1-202ENST00000416728 KPNB1Q14974 876 aaKnown RBP11.54□□□□□ -0.56
PAF1-202ENST00000416728 BAIAP2L2Q6UXY1 529 aa11.54□□□□□ -0.56
PAF1-202ENST00000416728 HEPN1Q6WQI6 88 aa11.54□□□□□ -0.56
PAF1-202ENST00000416728 CCDC121Q6ZUS5 278 aa11.54□□□□□ -0.56
PAF1-202ENST00000416728 RNF166Q96A37 237 aaPredicted RBP11.54□□□□□ -0.56
PAF1-202ENST00000416728 RFT1Q96AA3 541 aa11.54□□□□□ -0.56
PAF1-202ENST00000416728 SLC25A33Q9BSK2 321 aa11.54□□□□□ -0.56
PAF1-202ENST00000416728 TAS2R3Q9NYW6 316 aa11.54□□□□□ -0.56
PAF1-202ENST00000416728 OAZ3Q9UMX2 235 aa11.54□□□□□ -0.56
PAF1-202ENST00000416728 TCRBV4S1A1TA0A5B7 111 aa11.54□□□□□ -0.56
PAF1-202ENST00000416728 FAM172BPA6NC97 362 aa11.54□□□□□ -0.56
PAF1-202ENST00000416728 ISG15P05161 165 aa11.54□□□□□ -0.56
PAF1-202ENST00000416728 LPLP06858 475 aa11.54□□□□□ -0.56
PAF1-202ENST00000416728 ZNF44P15621 663 aa11.54□□□□□ -0.56
PAF1-202ENST00000416728 CEACAM3P40198 252 aa11.54□□□□□ -0.56
PAF1-202ENST00000416728 GLIPR1P48060 266 aa11.54□□□□□ -0.56
PAF1-202ENST00000416728 AESQ08117 197 aa11.54□□□□□ -0.56
PAF1-202ENST00000416728 ABCA11PQ4W5N1 156 aa11.54□□□□□ -0.56
PAF1-202ENST00000416728 C1orf146Q5VVC0 180 aa11.54□□□□□ -0.56
PAF1-202ENST00000416728 KCTD20Q7Z5Y7 419 aa11.54□□□□□ -0.56
PAF1-202ENST00000416728 OR4X2Q8NGF9 303 aa11.54□□□□□ -0.56
PAF1-202ENST00000416728 CORO2AQ92828 525 aa11.54□□□□□ -0.56
PAF1-202ENST00000416728 CREB3L1Q96BA8 519 aa11.54□□□□□ -0.56
PAF1-202ENST00000416728 MBOAT4Q96T53 435 aa11.54□□□□□ -0.56
PAF1-202ENST00000416728 NEK6Q9HC98 313 aa11.54□□□□□ -0.56
PAF1-202ENST00000416728 IMPAD1Q9NX62 359 aa11.54□□□□□ -0.56
PAF1-202ENST00000416728 FRRS1LQ9P0K9 344 aa11.54□□□□□ -0.56
PAF1-202ENST00000416728 HHLA2Q9UM44 414 aa11.54□□□□□ -0.56
PAF1-202ENST00000416728 TSSC4Q9Y5U2 329 aaPredicted RBP11.54□□□□□ -0.56
PAF1-202ENST00000416728 IGKV1-12A0A0C4DH73 117 aa11.53□□□□□ -0.56
PAF1-202ENST00000416728 DAPL1A0PJW8 107 aa11.53□□□□□ -0.56
PAF1-202ENST00000416728 ODAMA1E959 279 aa11.53□□□□□ -0.56
PAF1-202ENST00000416728 TOR1AO14656 332 aa11.53□□□□□ -0.56
PAF1-202ENST00000416728 SLC16A6O15403 523 aa11.53□□□□□ -0.56
PAF1-202ENST00000416728 KDM4BO94953 1096 aa11.53□□□□□ -0.56
PAF1-202ENST00000416728 OR2F2O95006 317 aa11.53□□□□□ -0.56
PAF1-202ENST00000416728 IGKV1D-12P01611 117 aa11.53□□□□□ -0.56
PAF1-202ENST00000416728 IGLV1-47P01700 117 aa11.53□□□□□ -0.56
PAF1-202ENST00000416728 LMO1P25800 156 aa11.53□□□□□ -0.56
PAF1-202ENST00000416728 CD34P28906 385 aa11.53□□□□□ -0.56
PAF1-202ENST00000416728 PTGFRP43088 359 aa11.53□□□□□ -0.56
PAF1-202ENST00000416728 RASSF2P50749 326 aa11.53□□□□□ -0.56
PAF1-202ENST00000416728 NANOS3P60323 173 aaKnown RBP11.53□□□□□ -0.56
PAF1-202ENST00000416728 SCN1BQ07699 218 aa11.53□□□□□ -0.56
PAF1-202ENST00000416728 BNIP1Q12981 228 aa11.53□□□□□ -0.56
PAF1-202ENST00000416728 TCTEX1D4Q5JR98 221 aa11.53□□□□□ -0.56
PAF1-202ENST00000416728 FDX2Q6P4F2 183 aa11.53□□□□□ -0.56
PAF1-202ENST00000416728 OR4D6Q8NGJ1 314 aa11.53□□□□□ -0.56
PAF1-202ENST00000416728 OR5D18Q8NGL1 313 aa11.53□□□□□ -0.56
PAF1-202ENST00000416728 OR13C3Q8NGS6 347 aa11.53□□□□□ -0.56
PAF1-202ENST00000416728 OR13C9Q8NGT0 318 aa11.53□□□□□ -0.56
PAF1-202ENST00000416728 CENPNQ96H22 339 aaPredicted RBP11.53□□□□□ -0.56
PAF1-202ENST00000416728 SPACA5Q96QH8 159 aa11.53□□□□□ -0.56
PAF1-202ENST00000416728 OSBPL10Q9BXB5 764 aa11.53□□□□□ -0.56
PAF1-202ENST00000416728 COMMD4Q9H0A8 199 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms