RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 MT-ND2P03891 347 aa12.17□□□□□ -0.46
UBXN4-203ENST00000416538 PRKACBP22694 351 aa12.17□□□□□ -0.46
UBXN4-203ENST00000416538 KIR2DS4P43632 304 aa12.17□□□□□ -0.46
UBXN4-203ENST00000416538 P2RX3P56373 397 aa12.17□□□□□ -0.46
UBXN4-203ENST00000416538 MEF2CQ06413 473 aaPredicted RBP12.17□□□□□ -0.46
UBXN4-203ENST00000416538 IL18R1Q13478 541 aa12.17□□□□□ -0.46
UBXN4-203ENST00000416538 FAM189A2Q15884 450 aa12.17□□□□□ -0.46
UBXN4-203ENST00000416538 SSX2Q16385 188 aa12.17□□□□□ -0.46
UBXN4-203ENST00000416538 SMN1Q16637 294 aaKnown RBP12.17□□□□□ -0.46
UBXN4-203ENST00000416538 SPIN3Q5JUX0 258 aa12.17□□□□□ -0.46
UBXN4-203ENST00000416538 XAF1Q6GPH4 301 aa12.17□□□□□ -0.46
UBXN4-203ENST00000416538 Q6ZS46 218 aa12.17□□□□□ -0.46
UBXN4-203ENST00000416538 SYS1Q8N2H4 156 aa12.17□□□□□ -0.46
UBXN4-203ENST00000416538 KLHDC1Q8N7A1 406 aa12.17□□□□□ -0.46
UBXN4-203ENST00000416538 OR4C13Q8NGP0 309 aa12.17□□□□□ -0.46
UBXN4-203ENST00000416538 COQ2Q96H96 371 aa12.17□□□□□ -0.46
UBXN4-203ENST00000416538 PDCD1LG2Q9BQ51 273 aa12.17□□□□□ -0.46
UBXN4-203ENST00000416538 COMMD4Q9H0A8 199 aa12.17□□□□□ -0.46
UBXN4-203ENST00000416538 SERTAD4Q9NUC0 356 aa12.17□□□□□ -0.46
UBXN4-203ENST00000416538 GSTK1Q9Y2Q3 226 aa12.17□□□□□ -0.46
UBXN4-203ENST00000416538 SESN1Q9Y6P5 492 aa12.17□□□□□ -0.46
UBXN4-203ENST00000416538 NOTCH3Q9UM47 2321 aa12.16□□□□□ -0.46
UBXN4-203ENST00000416538 hADV38S2A0JD32 116 aa12.16□□□□□ -0.46
UBXN4-203ENST00000416538 FAM172BPA6NC97 362 aa12.16□□□□□ -0.46
UBXN4-203ENST00000416538 MGST3O14880 152 aa12.16□□□□□ -0.46
UBXN4-203ENST00000416538 LIMS3P0CW19 117 aa12.16□□□□□ -0.46
UBXN4-203ENST00000416538 LIMS4P0CW20 117 aa12.16□□□□□ -0.46
UBXN4-203ENST00000416538 PEX2P28328 305 aa12.16□□□□□ -0.46
UBXN4-203ENST00000416538 GTF2A1P52655 376 aaPredicted RBP12.16□□□□□ -0.46
UBXN4-203ENST00000416538 LGALS4P56470 323 aa12.16□□□□□ -0.46
UBXN4-203ENST00000416538 HERPUD1Q15011 391 aa12.16□□□□□ -0.46
UBXN4-203ENST00000416538 PRAMEF5Q5TYX0 476 aa12.16□□□□□ -0.46
UBXN4-203ENST00000416538 LPCAT4Q643R3 524 aa12.16□□□□□ -0.46
UBXN4-203ENST00000416538 Q6P435 159 aa12.16□□□□□ -0.46
UBXN4-203ENST00000416538 C1QL4Q86Z23 238 aa12.16□□□□□ -0.46
UBXN4-203ENST00000416538 ZNF676Q8N7Q3 588 aa12.16□□□□□ -0.46
UBXN4-203ENST00000416538 OR51A2Q8NGJ7 313 aa12.16□□□□□ -0.46
UBXN4-203ENST00000416538 OR4P4Q8NGL7 312 aa12.16□□□□□ -0.46
UBXN4-203ENST00000416538 OR13D1Q8NGV5 346 aa12.16□□□□□ -0.46
UBXN4-203ENST00000416538 CFHR4Q92496 578 aa12.16□□□□□ -0.46
UBXN4-203ENST00000416538 C9orf16Q9BUW7 83 aa12.16□□□□□ -0.46
UBXN4-203ENST00000416538 FAM118AQ9NWS6 357 aa12.16□□□□□ -0.46
UBXN4-203ENST00000416538 LOC100130705A0A1B0GUX0 176 aa12.15□□□□□ -0.46
UBXN4-203ENST00000416538 GLIPR1P48060 266 aa12.15□□□□□ -0.46
UBXN4-203ENST00000416538 DYNC1I2Q13409 638 aaKnown RBP12.15□□□□□ -0.46
UBXN4-203ENST00000416538 CDK5R1Q15078 307 aa12.15□□□□□ -0.46
UBXN4-203ENST00000416538 TMEM95Q3KNT9 176 aa12.15□□□□□ -0.46
UBXN4-203ENST00000416538 LIAT1Q6ZQX7 453 aa12.15□□□□□ -0.46
UBXN4-203ENST00000416538 Q8N2B8 174 aa12.15□□□□□ -0.46
UBXN4-203ENST00000416538 FAM110DQ8TAY7 271 aaPredicted RBP12.15□□□□□ -0.46
UBXN4-203ENST00000416538 RPS4Y2Q8TD47 263 aa12.15□□□□□ -0.46
UBXN4-203ENST00000416538 WIPF2Q8TF74 440 aaPredicted RBP12.15□□□□□ -0.46
UBXN4-203ENST00000416538 FOXRED1Q96CU9 486 aaPredicted RBP12.15□□□□□ -0.46
UBXN4-203ENST00000416538 NPFFR1Q9GZQ6 430 aa12.15□□□□□ -0.46
UBXN4-203ENST00000416538 PPIL3Q9H2H8 161 aaKnown RBP12.15□□□□□ -0.46
UBXN4-203ENST00000416538 TMEM133Q9H2Q1 129 aa12.15□□□□□ -0.46
UBXN4-203ENST00000416538 ZCCHC4Q9H5U6 513 aa12.15□□□□□ -0.46
UBXN4-203ENST00000416538 EXOSC4Q9NPD3 245 aaKnown RBP12.15□□□□□ -0.46
UBXN4-203ENST00000416538 MRPS18AQ9NVS2 196 aaKnown RBP12.15□□□□□ -0.46
UBXN4-203ENST00000416538 ZNF581Q9P0T4 197 aa12.15□□□□□ -0.46
UBXN4-203ENST00000416538 HILPDAQ9Y5L2 63 aa12.15□□□□□ -0.46
UBXN4-203ENST00000416538 SLC33A1O00400 549 aaPredicted RBP12.14□□□□□ -0.47
UBXN4-203ENST00000416538 CLIC3O95833 236 aa12.14□□□□□ -0.47
UBXN4-203ENST00000416538 LMO1P25800 156 aa12.14□□□□□ -0.47
UBXN4-203ENST00000416538 ERP29P30040 261 aaKnown RBP12.14□□□□□ -0.47
UBXN4-203ENST00000416538 AESQ08117 197 aa12.14□□□□□ -0.47
UBXN4-203ENST00000416538 RAB40BQ12829 278 aa12.14□□□□□ -0.47
UBXN4-203ENST00000416538 ATXN7L3Q14CW9 347 aaPredicted RBP12.14□□□□□ -0.47
UBXN4-203ENST00000416538 C2orf68Q2NKX9 166 aa12.14□□□□□ -0.47
UBXN4-203ENST00000416538 ZNF529Q6P280 563 aa12.14□□□□□ -0.47
UBXN4-203ENST00000416538 ZBTB49Q6ZSB9 765 aa12.14□□□□□ -0.47
UBXN4-203ENST00000416538 LYG1Q8N1E2 194 aa12.14□□□□□ -0.47
UBXN4-203ENST00000416538 PARP16Q8N5Y8 322 aa12.14□□□□□ -0.47
UBXN4-203ENST00000416538 OR2T6Q8NHC8 308 aa12.14□□□□□ -0.47
UBXN4-203ENST00000416538 MALSU1Q96EH3 234 aa12.14□□□□□ -0.47
UBXN4-203ENST00000416538 CDCA4Q9BXL8 241 aa12.14□□□□□ -0.47
UBXN4-203ENST00000416538 RAB18Q9NP72 206 aa12.14□□□□□ -0.47
UBXN4-203ENST00000416538 TMEM212A6NML5 194 aa12.13□□□□□ -0.47
UBXN4-203ENST00000416538 SNTNA6NMZ2 147 aa12.13□□□□□ -0.47
UBXN4-203ENST00000416538 GABRPO00591 440 aa12.13□□□□□ -0.47
UBXN4-203ENST00000416538 SULT1B1O43704 296 aa12.13□□□□□ -0.47
UBXN4-203ENST00000416538 FADS2O95864 444 aaKnown RBP12.13□□□□□ -0.47
UBXN4-203ENST00000416538 CYB5AP00167 134 aa12.13□□□□□ -0.47
UBXN4-203ENST00000416538 VSIG10L2P0DP72 767 aa12.13□□□□□ -0.47
UBXN4-203ENST00000416538 DYNLT3P51808 116 aa12.13□□□□□ -0.47
UBXN4-203ENST00000416538 KISS1Q15726 138 aa12.13□□□□□ -0.47
UBXN4-203ENST00000416538 ZSCAN26Q16670 478 aa12.13□□□□□ -0.47
UBXN4-203ENST00000416538 OR2G6Q5TZ20 316 aa12.13□□□□□ -0.47
UBXN4-203ENST00000416538 TRAPPC6BQ86SZ2 158 aa12.13□□□□□ -0.47
UBXN4-203ENST00000416538 C10orf67Q8IYJ2 551 aa12.13□□□□□ -0.47
UBXN4-203ENST00000416538 SAXO1Q8IYX7 474 aa12.13□□□□□ -0.47
UBXN4-203ENST00000416538 OR5AK2Q8NH90 309 aa12.13□□□□□ -0.47
UBXN4-203ENST00000416538 CNIH3Q8TBE1 160 aa12.13□□□□□ -0.47
UBXN4-203ENST00000416538 JAM3Q9BX67 310 aa12.13□□□□□ -0.47
UBXN4-203ENST00000416538 CLEC7AQ9BXN2 247 aa12.13□□□□□ -0.47
UBXN4-203ENST00000416538 ZNF286AQ9HBT8 521 aa12.13□□□□□ -0.47
UBXN4-203ENST00000416538 NEK6Q9HC98 313 aa12.13□□□□□ -0.47
UBXN4-203ENST00000416538 INPP5EQ9NRR6 644 aa12.13□□□□□ -0.47
UBXN4-203ENST00000416538 ING3Q9NXR8 418 aa12.13□□□□□ -0.47
UBXN4-203ENST00000416538 TAS2R4Q9NYW5 299 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms