RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 GLRX2Q9NS18 164 aa8.5□□□□□ -1.05
SS18-203ENST00000415083 ZMAT5Q9UDW3 170 aaKnown RBP8.5□□□□□ -1.05
SS18-203ENST00000415083 KMT2EQ8IZD2 1858 aa8.5□□□□□ -1.05
SS18-203ENST00000415083 PRRC2CQ9Y520 2896 aaKnown RBP8.5□□□□□ -1.05
SS18-203ENST00000415083 A0A087WZY1 265 aa8.5□□□□□ -1.05
SS18-203ENST00000415083 IGKV1D-13A0A0B4J2D9 117 aa8.5□□□□□ -1.05
SS18-203ENST00000415083 NKX2-6A6NCS4 301 aa8.5□□□□□ -1.05
SS18-203ENST00000415083 IGKV1-13P0DP09 117 aa8.5□□□□□ -1.05
SS18-203ENST00000415083 RAB5BP61020 215 aa8.5□□□□□ -1.05
SS18-203ENST00000415083 GUK1Q16774 197 aa8.5□□□□□ -1.05
SS18-203ENST00000415083 ADAM5Q6NVV9 412 aa8.5□□□□□ -1.05
SS18-203ENST00000415083 NECAP2Q9NVZ3 263 aa8.5□□□□□ -1.05
SS18-203ENST00000415083 ZNF850A8MQ14 1090 aa8.49□□□□□ -1.05
SS18-203ENST00000415083 ZNF724A8MTY0 619 aa8.49□□□□□ -1.05
SS18-203ENST00000415083 IGHV2-5P01817 119 aa8.49□□□□□ -1.05
SS18-203ENST00000415083 NQO2P16083 231 aa8.49□□□□□ -1.05
SS18-203ENST00000415083 MLF1P58340 268 aa8.49□□□□□ -1.05
SS18-203ENST00000415083 RAC1P63000 192 aa8.49□□□□□ -1.05
SS18-203ENST00000415083 ZNF616Q08AN1 781 aa8.49□□□□□ -1.05
SS18-203ENST00000415083 RSU1Q15404 277 aa8.49□□□□□ -1.05
SS18-203ENST00000415083 BOD1Q96IK1 185 aa8.49□□□□□ -1.05
SS18-203ENST00000415083 WDR54Q9H977 334 aa8.49□□□□□ -1.05
SS18-203ENST00000415083 SEBOXQ9HB31 216 aaPredicted RBP8.49□□□□□ -1.05
SS18-203ENST00000415083 C1orf196B1AJZ1 125 aa8.49□□□□□ -1.05
SS18-203ENST00000415083 PROB1E7EW31 1015 aa8.49□□□□□ -1.05
SS18-203ENST00000415083 UBE2CO00762 179 aa8.49□□□□□ -1.05
SS18-203ENST00000415083 GPR137BO60478 399 aa8.49□□□□□ -1.05
SS18-203ENST00000415083 S100A9P06702 114 aaKnown RBP8.49□□□□□ -1.05
SS18-203ENST00000415083 CST2P09228 141 aa8.49□□□□□ -1.05
SS18-203ENST00000415083 SEC11BP0C7V7 166 aa8.49□□□□□ -1.05
SS18-203ENST00000415083 PTAFRP25105 342 aa8.49□□□□□ -1.05
SS18-203ENST00000415083 RPS18P62269 152 aaKnown RBP8.49□□□□□ -1.05
SS18-203ENST00000415083 OR8B8Q15620 311 aa8.49□□□□□ -1.05
SS18-203ENST00000415083 HLA-BQ31612 363 aa8.49□□□□□ -1.05
SS18-203ENST00000415083 OSR2Q8N2R0 312 aa8.49□□□□□ -1.05
SS18-203ENST00000415083 AGBL5Q8NDL9 886 aa8.49□□□□□ -1.05
SS18-203ENST00000415083 SPSB1Q96BD6 273 aa8.49□□□□□ -1.05
SS18-203ENST00000415083 ZNF845Q96IR2 970 aaPredicted RBP8.49□□□□□ -1.05
SS18-203ENST00000415083 SMCO4Q9NRQ5 59 aa8.49□□□□□ -1.05
SS18-203ENST00000415083 ST3GAL6Q9Y274 331 aa8.49□□□□□ -1.05
SS18-203ENST00000415083 A0A1W2PPE2 198 aa8.48□□□□□ -1.05
SS18-203ENST00000415083 FAM24AA6NFZ4 105 aa8.48□□□□□ -1.05
SS18-203ENST00000415083 E5RGE8 158 aa8.48□□□□□ -1.05
SS18-203ENST00000415083 TLX3O43711 291 aaPredicted RBP8.48□□□□□ -1.05
SS18-203ENST00000415083 NRASP01111 189 aa8.48□□□□□ -1.05
SS18-203ENST00000415083 OR8U8P0C7N1 319 aa8.48□□□□□ -1.05
SS18-203ENST00000415083 ZNF14P17017 642 aaPredicted RBP8.48□□□□□ -1.05
SS18-203ENST00000415083 C20orf204Q6ZNR8 217 aa8.48□□□□□ -1.05
SS18-203ENST00000415083 FAM24BQ8N5W8 94 aa8.48□□□□□ -1.05
SS18-203ENST00000415083 C15orf54Q8N8G6 183 aa8.48□□□□□ -1.05
SS18-203ENST00000415083 HSD17B11Q8NBQ5 300 aa8.48□□□□□ -1.05
SS18-203ENST00000415083 SIGLEC12Q96PQ1 595 aa8.48□□□□□ -1.05
SS18-203ENST00000415083 OR2H1Q9GZK4 316 aa8.48□□□□□ -1.05
SS18-203ENST00000415083 SPACA1Q9HBV2 294 aa8.48□□□□□ -1.05
SS18-203ENST00000415083 C19orf12Q9NSK7 152 aa8.48□□□□□ -1.05
SS18-203ENST00000415083 NSG2Q9Y328 171 aa8.48□□□□□ -1.05
SS18-203ENST00000415083 IFITM10A6NMD0 228 aa8.48□□□□□ -1.05
SS18-203ENST00000415083 PPIHO43447 177 aaKnown RBP8.48□□□□□ -1.05
SS18-203ENST00000415083 RGS19P49795 217 aa8.48□□□□□ -1.05
SS18-203ENST00000415083 RBP2P50120 134 aa8.48□□□□□ -1.05
SS18-203ENST00000415083 RBM11P57052 281 aaKnown RBP8.48□□□□□ -1.05
SS18-203ENST00000415083 POLR2GP62487 172 aaKnown RBP eCLIP8.48□□□□□ -1.05
SS18-203ENST00000415083 ABLIM2Q6H8Q1 611 aa8.48□□□□□ -1.05
SS18-203ENST00000415083 SPTSSAQ969W0 71 aa8.48□□□□□ -1.05
SS18-203ENST00000415083 TAAR9Q96RI9 348 aa8.48□□□□□ -1.05
SS18-203ENST00000415083 BCL2L14Q9BZR8 327 aa8.48□□□□□ -1.05
SS18-203ENST00000415083 PLEKHA2Q9HB19 425 aa8.48□□□□□ -1.05
SS18-203ENST00000415083 IL36GQ9NZH8 169 aa8.48□□□□□ -1.05
SS18-203ENST00000415083 MIOXQ9UGB7 285 aa8.48□□□□□ -1.05
SS18-203ENST00000415083 PTRH2Q9Y3E5 179 aaKnown RBP8.48□□□□□ -1.05
SS18-203ENST00000415083 POMT1Q9Y6A1 747 aa8.48□□□□□ -1.05
SS18-203ENST00000415083 A0A0G2JRQ6 117 aa8.48□□□□□ -1.05
SS18-203ENST00000415083 TP53I11O14683 189 aa8.48□□□□□ -1.05
SS18-203ENST00000415083 GPR37O15354 613 aa8.48□□□□□ -1.05
SS18-203ENST00000415083 EIF1BO60739 113 aaKnown RBP8.48□□□□□ -1.05
SS18-203ENST00000415083 LCATP04180 440 aa8.48□□□□□ -1.05
SS18-203ENST00000415083 IFNA4P05014 189 aa8.48□□□□□ -1.05
SS18-203ENST00000415083 FBP1P09467 338 aa8.48□□□□□ -1.05
SS18-203ENST00000415083 ECI1P42126 302 aa8.48□□□□□ -1.05
SS18-203ENST00000415083 EWSR1Q01844 656 aaKnown RBP eCLIP8.48□□□□□ -1.05
SS18-203ENST00000415083 FAM189A2Q15884 450 aa8.48□□□□□ -1.05
SS18-203ENST00000415083 CXorf66Q5JRM2 361 aaPredicted RBP8.48□□□□□ -1.05
SS18-203ENST00000415083 NCMAPQ5T1S8 102 aa8.48□□□□□ -1.05
SS18-203ENST00000415083 ZNF818PQ6ZRF7 136 aa8.48□□□□□ -1.05
SS18-203ENST00000415083 TDHQ8IZJ6 230 aa8.48□□□□□ -1.05
SS18-203ENST00000415083 CD300LFQ8TDQ1 290 aa8.48□□□□□ -1.05
SS18-203ENST00000415083 ABHD3Q8WU67 409 aa8.48□□□□□ -1.05
SS18-203ENST00000415083 PRRG4Q9BZD6 226 aa8.48□□□□□ -1.05
SS18-203ENST00000415083 EIF5A2Q9GZV4 153 aaKnown RBP8.48□□□□□ -1.05
SS18-203ENST00000415083 MEMO1Q9Y316 297 aa8.48□□□□□ -1.05
SS18-203ENST00000415083 PATE3B3GLJ2 98 aa8.47□□□□□ -1.05
SS18-203ENST00000415083 VAMP5O95183 116 aa8.47□□□□□ -1.05
SS18-203ENST00000415083 IGHV3-9P01782 118 aa8.47□□□□□ -1.05
SS18-203ENST00000415083 SCTP09683 121 aa8.47□□□□□ -1.05
SS18-203ENST00000415083 ITGA3P26006 1051 aa8.47□□□□□ -1.05
SS18-203ENST00000415083 FKBP2P26885 142 aaKnown RBP8.47□□□□□ -1.05
SS18-203ENST00000415083 PAX9P55771 341 aa8.47□□□□□ -1.05
SS18-203ENST00000415083 EXT1Q16394 746 aa8.47□□□□□ -1.05
SS18-203ENST00000415083 ZNF100Q8IYN0 542 aa8.47□□□□□ -1.05
SS18-203ENST00000415083 Q8NFD4 153 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms