RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 LYNX1G3V0Z9 82 aa11.93□□□□□ -0.5
SF3B1-204ENST00000414963 MFNGO00587 321 aa11.93□□□□□ -0.5
SF3B1-204ENST00000414963 CTDSPLO15194 276 aa11.93□□□□□ -0.5
SF3B1-204ENST00000414963 NDUFA2O43678 99 aa11.93□□□□□ -0.5
SF3B1-204ENST00000414963 NDUFS7O75251 213 aa11.93□□□□□ -0.5
SF3B1-204ENST00000414963 OR7C1O76099 320 aaPredicted RBP11.93□□□□□ -0.5
SF3B1-204ENST00000414963 LY6HO94772 140 aa11.93□□□□□ -0.5
SF3B1-204ENST00000414963 OR2H2O95918 312 aa11.93□□□□□ -0.5
SF3B1-204ENST00000414963 IGHV4-39P01824 125 aa11.93□□□□□ -0.5
SF3B1-204ENST00000414963 LYNX1P0DP58 116 aa11.93□□□□□ -0.5
SF3B1-204ENST00000414963 DUSP1P28562 367 aa11.93□□□□□ -0.5
SF3B1-204ENST00000414963 GMFBP60983 142 aa11.93□□□□□ -0.5
SF3B1-204ENST00000414963 IKZF1Q13422 519 aa11.93□□□□□ -0.5
SF3B1-204ENST00000414963 ZNF846Q147U1 533 aa11.93□□□□□ -0.5
SF3B1-204ENST00000414963 KCNJ8Q15842 424 aa11.93□□□□□ -0.5
SF3B1-204ENST00000414963 ZNF79Q15937 498 aa11.93□□□□□ -0.5
SF3B1-204ENST00000414963 CDNFQ49AH0 187 aa11.93□□□□□ -0.5
SF3B1-204ENST00000414963 HIST2H2BCQ6DN03 193 aa11.93□□□□□ -0.5
SF3B1-204ENST00000414963 DNM1P46Q6ZS02 220 aa11.93□□□□□ -0.5
SF3B1-204ENST00000414963 CD177Q8N6Q3 437 aa11.93□□□□□ -0.5
SF3B1-204ENST00000414963 OR4M2Q8NGB6 313 aa11.93□□□□□ -0.5
SF3B1-204ENST00000414963 ST8SIA4Q92187 359 aa11.93□□□□□ -0.5
SF3B1-204ENST00000414963 SDSLQ96GA7 329 aa11.93□□□□□ -0.5
SF3B1-204ENST00000414963 ARHGAP5-AS1Q96IT6 56 aa11.93□□□□□ -0.5
SF3B1-204ENST00000414963 PECRQ9BY49 303 aa11.93□□□□□ -0.5
SF3B1-204ENST00000414963 GSX2Q9BZM3 304 aa11.93□□□□□ -0.5
SF3B1-204ENST00000414963 WDR12Q9GZL7 423 aaKnown RBP11.93□□□□□ -0.5
SF3B1-204ENST00000414963 TMEM165Q9HC07 324 aa11.93□□□□□ -0.5
SF3B1-204ENST00000414963 ZNF581Q9P0T4 197 aa11.93□□□□□ -0.5
SF3B1-204ENST00000414963 KCNK7Q9Y2U2 307 aa11.93□□□□□ -0.5
SF3B1-204ENST00000414963 DYSFO75923 2080 aa11.93□□□□□ -0.5
SF3B1-204ENST00000414963 TANC2Q9HCD6 1990 aa11.92□□□□□ -0.5
SF3B1-204ENST00000414963 IGHV3OR15-7A0A075B7D8 119 aa11.92□□□□□ -0.5
SF3B1-204ENST00000414963 SERPINE3A8MV23 424 aa11.92□□□□□ -0.5
SF3B1-204ENST00000414963 SLC33A1O00400 549 aaPredicted RBP11.92□□□□□ -0.5
SF3B1-204ENST00000414963 IGHV2-70P01814 119 aa11.92□□□□□ -0.5
SF3B1-204ENST00000414963 AMY2BP19961 511 aa11.92□□□□□ -0.5
SF3B1-204ENST00000414963 GIFP27352 417 aa11.92□□□□□ -0.5
SF3B1-204ENST00000414963 CD40LGP29965 261 aa11.92□□□□□ -0.5
SF3B1-204ENST00000414963 PPP5CP53041 499 aa11.92□□□□□ -0.5
SF3B1-204ENST00000414963 SNU13P55769 128 aaKnown RBP11.92□□□□□ -0.5
SF3B1-204ENST00000414963 BTG1P62324 171 aa11.92□□□□□ -0.5
SF3B1-204ENST00000414963 MRPS10P82664 201 aaKnown RBP11.92□□□□□ -0.5
SF3B1-204ENST00000414963 IL18Q14116 193 aa11.92□□□□□ -0.5
SF3B1-204ENST00000414963 ZMYND11Q15326 602 aa11.92□□□□□ -0.5
SF3B1-204ENST00000414963 PNLIPRP3Q17RR3 467 aa11.92□□□□□ -0.5
SF3B1-204ENST00000414963 HACD4Q5VWC8 232 aa11.92□□□□□ -0.5
SF3B1-204ENST00000414963 SHEQ5VZ18 495 aa11.92□□□□□ -0.5
SF3B1-204ENST00000414963 SFRP4Q6FHJ7 346 aaPredicted RBP11.92□□□□□ -0.5
SF3B1-204ENST00000414963 C6orf201Q7Z4U5 140 aa11.92□□□□□ -0.5
SF3B1-204ENST00000414963 PEG10Q86TG7 708 aaKnown RBP11.92□□□□□ -0.5
SF3B1-204ENST00000414963 IZUMO1Q8IYV9 350 aa11.92□□□□□ -0.5
SF3B1-204ENST00000414963 GDPD1Q8N9F7 314 aa11.92□□□□□ -0.5
SF3B1-204ENST00000414963 DTX3Q8N9I9 347 aa11.92□□□□□ -0.5
SF3B1-204ENST00000414963 OR5T2Q8NGG2 359 aa11.92□□□□□ -0.5
SF3B1-204ENST00000414963 NRGNQ92686 78 aa11.92□□□□□ -0.5
SF3B1-204ENST00000414963 PLEKHJ1Q9NW61 149 aa11.92□□□□□ -0.5
SF3B1-204ENST00000414963 MRPS7Q9Y2R9 242 aaKnown RBP11.92□□□□□ -0.5
SF3B1-204ENST00000414963 SPG11Q96JI7 2443 aa11.92□□□□□ -0.5
SF3B1-204ENST00000414963 AKAP6Q13023 2319 aa11.91□□□□□ -0.5
SF3B1-204ENST00000414963 SULT1C2O00338 296 aa11.91□□□□□ -0.5
SF3B1-204ENST00000414963 GSTZ1O43708 216 aaPredicted RBP11.91□□□□□ -0.5
SF3B1-204ENST00000414963 ZNF737O75373 536 aa11.91□□□□□ -0.5
SF3B1-204ENST00000414963 ZNF205O95201 554 aa11.91□□□□□ -0.5
SF3B1-204ENST00000414963 ZNF44P15621 663 aa11.91□□□□□ -0.5
SF3B1-204ENST00000414963 GNB3P16520 340 aa11.91□□□□□ -0.5
SF3B1-204ENST00000414963 MDH2P40926 338 aaKnown RBP11.91□□□□□ -0.5
SF3B1-204ENST00000414963 PAX5Q02548 391 aa11.91□□□□□ -0.5
SF3B1-204ENST00000414963 SCN1BQ07699 218 aa11.91□□□□□ -0.5
SF3B1-204ENST00000414963 RBM39Q14498 530 aaKnown RBP11.91□□□□□ -0.5
SF3B1-204ENST00000414963 PDCD1Q15116 288 aa11.91□□□□□ -0.5
SF3B1-204ENST00000414963 ZNF788Q6ZQV5 615 aa11.91□□□□□ -0.5
SF3B1-204ENST00000414963 ZNF561Q8N587 486 aa11.91□□□□□ -0.5
SF3B1-204ENST00000414963 SUMF2Q8NBJ7 301 aa11.91□□□□□ -0.5
SF3B1-204ENST00000414963 DEFB108BQ8NET1 73 aa11.91□□□□□ -0.5
SF3B1-204ENST00000414963 RAB1CQ92928 201 aa11.91□□□□□ -0.5
SF3B1-204ENST00000414963 MBD6Q96DN6 1003 aa11.91□□□□□ -0.5
SF3B1-204ENST00000414963 TIMD4Q96H15 378 aa11.91□□□□□ -0.5
SF3B1-204ENST00000414963 FAAP24Q9BTP7 215 aa11.91□□□□□ -0.5
SF3B1-204ENST00000414963 DPCDQ9BVM2 203 aaPredicted RBP11.91□□□□□ -0.5
SF3B1-204ENST00000414963 SRRQ9GZT4 340 aa11.91□□□□□ -0.5
SF3B1-204ENST00000414963 SCPEP1Q9HB40 452 aa11.91□□□□□ -0.5
SF3B1-204ENST00000414963 BEX4Q9NWD9 120 aaPredicted RBP11.91□□□□□ -0.5
SF3B1-204ENST00000414963 KAAG1Q9UBP8 84 aa11.91□□□□□ -0.5
SF3B1-204ENST00000414963 OR14J1Q9UGF5 321 aa11.91□□□□□ -0.5
SF3B1-204ENST00000414963 USF3Q68DE3 2245 aa11.91□□□□□ -0.5
SF3B1-204ENST00000414963 UNC79Q9P2D8 2635 aa11.9□□□□□ -0.5
SF3B1-204ENST00000414963 POM121CA8CG34 1229 aa11.9□□□□□ -0.5
SF3B1-204ENST00000414963 MCRIP1C9JLW8 97 aa11.9□□□□□ -0.5
SF3B1-204ENST00000414963 GABARAPH6UMI1 98 aa11.9□□□□□ -0.5
SF3B1-204ENST00000414963 PRSS3P35030 304 aa11.9□□□□□ -0.5
SF3B1-204ENST00000414963 KCNJ3P48549 501 aa11.9□□□□□ -0.5
SF3B1-204ENST00000414963 ATP5J2P56134 94 aa11.9□□□□□ -0.5
SF3B1-204ENST00000414963 COL10A1Q03692 680 aa11.9□□□□□ -0.5
SF3B1-204ENST00000414963 TMEM155Q4W5P6 130 aa11.9□□□□□ -0.5
SF3B1-204ENST00000414963 NKAPLQ5M9Q1 402 aa11.9□□□□□ -0.5
SF3B1-204ENST00000414963 ATAD3CQ5T2N8 411 aa11.9□□□□□ -0.5
SF3B1-204ENST00000414963 DCDC5Q6ZRR9 648 aa11.9□□□□□ -0.5
SF3B1-204ENST00000414963 RTN4RL2Q86UN3 420 aa11.9□□□□□ -0.5
SF3B1-204ENST00000414963 SNX29P2Q8IUI4 249 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms