RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 MPPED2Q15777 294 aa13.23□□□□□ -0.29
SHMT2-202ENST00000414700 PLCXD3Q63HM9 321 aa13.23□□□□□ -0.29
SHMT2-202ENST00000414700 MOB3CQ70IA8 216 aa13.23□□□□□ -0.29
SHMT2-202ENST00000414700 CSNK2A3Q8NEV1 391 aa13.23□□□□□ -0.29
SHMT2-202ENST00000414700 NUP37Q8NFH4 326 aa13.23□□□□□ -0.29
SHMT2-202ENST00000414700 NARS2Q96I59 477 aaKnown RBP13.23□□□□□ -0.29
SHMT2-202ENST00000414700 MFFQ9GZY8 342 aa13.23□□□□□ -0.29
SHMT2-202ENST00000414700 KCNK15Q9H427 330 aa13.23□□□□□ -0.29
SHMT2-202ENST00000414700 AKAP6Q13023 2319 aa13.23□□□□□ -0.29
SHMT2-202ENST00000414700 CHD3Q12873 2000 aaKnown RBP13.23□□□□□ -0.29
SHMT2-202ENST00000414700 IGKV1-27A0A075B6S5 117 aa13.23□□□□□ -0.29
SHMT2-202ENST00000414700 IQCF6A8MYZ5 107 aa13.23□□□□□ -0.29
SHMT2-202ENST00000414700 LINC00587B1AMM8 73 aa13.23□□□□□ -0.29
SHMT2-202ENST00000414700 CST4P01036 141 aa13.23□□□□□ -0.29
SHMT2-202ENST00000414700 MGMTP16455 207 aa13.23□□□□□ -0.29
SHMT2-202ENST00000414700 LOXP28300 417 aaPredicted RBP13.23□□□□□ -0.29
SHMT2-202ENST00000414700 OR4D6Q8NGJ1 314 aa13.23□□□□□ -0.29
SHMT2-202ENST00000414700 OR5D18Q8NGL1 313 aa13.23□□□□□ -0.29
SHMT2-202ENST00000414700 SYNPRQ8TBG9 265 aa13.23□□□□□ -0.29
SHMT2-202ENST00000414700 GTF3AQ92664 365 aaKnown RBP13.23□□□□□ -0.29
SHMT2-202ENST00000414700 GCDHQ92947 438 aaPredicted RBP13.23□□□□□ -0.29
SHMT2-202ENST00000414700 MRPL37Q9BZE1 423 aaKnown RBP13.23□□□□□ -0.29
SHMT2-202ENST00000414700 CNTD2Q9H8S5 307 aa13.23□□□□□ -0.29
SHMT2-202ENST00000414700 MSL2Q9HCI7 577 aa13.23□□□□□ -0.29
SHMT2-202ENST00000414700 ATP23Q9Y6H3 246 aa13.23□□□□□ -0.29
SHMT2-202ENST00000414700 FAM230AA0A1W2PPH8 454 aa13.22□□□□□ -0.29
SHMT2-202ENST00000414700 DISC1C4P0D8 188 aa13.22□□□□□ -0.29
SHMT2-202ENST00000414700 H0YL77 283 aa13.22□□□□□ -0.29
SHMT2-202ENST00000414700 KITLGP21583 273 aa13.22□□□□□ -0.29
SHMT2-202ENST00000414700 ZNF93P35789 620 aaPredicted RBP13.22□□□□□ -0.29
SHMT2-202ENST00000414700 ARHGDIBP52566 201 aa13.22□□□□□ -0.29
SHMT2-202ENST00000414700 KISS1Q15726 138 aa13.22□□□□□ -0.29
SHMT2-202ENST00000414700 BEX5Q5H9J7 111 aa13.22□□□□□ -0.29
SHMT2-202ENST00000414700 FAM166AQ6J272 317 aa13.22□□□□□ -0.29
SHMT2-202ENST00000414700 Q6ZR03 302 aa13.22□□□□□ -0.29
SHMT2-202ENST00000414700 SLC36A1Q7Z2H8 476 aa13.22□□□□□ -0.29
SHMT2-202ENST00000414700 SVBPQ8N300 66 aa13.22□□□□□ -0.29
SHMT2-202ENST00000414700 OR52B4Q8NGK2 314 aa13.22□□□□□ -0.29
SHMT2-202ENST00000414700 PIK3IP1Q96FE7 263 aa13.22□□□□□ -0.29
SHMT2-202ENST00000414700 TSNAXQ99598 290 aaKnown RBP13.22□□□□□ -0.29
SHMT2-202ENST00000414700 ARFGEF3Q5TH69 2177 aa13.22□□□□□ -0.29
SHMT2-202ENST00000414700 MEGF11A6BM72 1044 aa13.22□□□□□ -0.29
SHMT2-202ENST00000414700 ANKRD30BLA7E2S9 258 aa13.22□□□□□ -0.29
SHMT2-202ENST00000414700 GOSR2O14653 212 aa13.22□□□□□ -0.29
SHMT2-202ENST00000414700 TIMM8AO60220 97 aaPredicted RBP13.22□□□□□ -0.29
SHMT2-202ENST00000414700 CD3EP07766 207 aa13.22□□□□□ -0.29
SHMT2-202ENST00000414700 VSIG10L2P0DP72 767 aa13.22□□□□□ -0.29
SHMT2-202ENST00000414700 CD37P11049 281 aa13.22□□□□□ -0.29
SHMT2-202ENST00000414700 PRF1P14222 555 aa13.22□□□□□ -0.29
SHMT2-202ENST00000414700 PLA2G2AP14555 144 aa13.22□□□□□ -0.29
SHMT2-202ENST00000414700 TUBG1P23258 451 aa13.22□□□□□ -0.29
SHMT2-202ENST00000414700 ART1P52961 327 aa13.22□□□□□ -0.29
SHMT2-202ENST00000414700 GLT8D1Q68CQ7 371 aa13.22□□□□□ -0.29
SHMT2-202ENST00000414700 ZNF600Q6ZNG1 722 aa13.22□□□□□ -0.29
SHMT2-202ENST00000414700 NKAIN3Q8N8D7 197 aa13.22□□□□□ -0.29
SHMT2-202ENST00000414700 OR2AK2Q8NG84 335 aa13.22□□□□□ -0.29
SHMT2-202ENST00000414700 OR10AD1Q8NGE0 317 aa13.22□□□□□ -0.29
SHMT2-202ENST00000414700 SLC25A38Q96DW6 304 aa13.22□□□□□ -0.29
SHMT2-202ENST00000414700 TUBG2Q9NRH3 451 aa13.22□□□□□ -0.29
SHMT2-202ENST00000414700 GCN1Q92616 2671 aaKnown RBP13.21□□□□□ -0.29
SHMT2-202ENST00000414700 IGLV3-9A0A075B6K5 115 aa13.21□□□□□ -0.29
SHMT2-202ENST00000414700 IGHV3-64DA0A0J9YX35 117 aa13.21□□□□□ -0.29
SHMT2-202ENST00000414700 E7EQL1 145 aa13.21□□□□□ -0.29
SHMT2-202ENST00000414700 SLC17A2O00624 439 aa13.21□□□□□ -0.29
SHMT2-202ENST00000414700 MLNRO43193 412 aa13.21□□□□□ -0.29
SHMT2-202ENST00000414700 SNAPINO95295 136 aa13.21□□□□□ -0.29
SHMT2-202ENST00000414700 IGHV3-13P01766 116 aa13.21□□□□□ -0.29
SHMT2-202ENST00000414700 OR3A4PP47883 348 aa13.21□□□□□ -0.29
SHMT2-202ENST00000414700 GPM6AP51674 278 aa13.21□□□□□ -0.29
SHMT2-202ENST00000414700 KLF3P57682 345 aaPredicted RBP13.21□□□□□ -0.29
SHMT2-202ENST00000414700 PLA2G7Q13093 441 aa13.21□□□□□ -0.29
SHMT2-202ENST00000414700 ADIPOQQ15848 244 aa13.21□□□□□ -0.29
SHMT2-202ENST00000414700 C2orf68Q2NKX9 166 aa13.21□□□□□ -0.29
SHMT2-202ENST00000414700 ELP2Q6IA86 826 aa13.21□□□□□ -0.29
SHMT2-202ENST00000414700 LDLRAD3Q86YD5 345 aa13.21□□□□□ -0.29
SHMT2-202ENST00000414700 C1orf174Q8IYL3 243 aa13.21□□□□□ -0.29
SHMT2-202ENST00000414700 ZDHHC23Q8IYP9 409 aa13.21□□□□□ -0.29
SHMT2-202ENST00000414700 C12orf45Q8N5I9 185 aaPredicted RBP13.21□□□□□ -0.29
SHMT2-202ENST00000414700 OR8G5Q8NG78 346 aa13.21□□□□□ -0.29
SHMT2-202ENST00000414700 SFT2D1Q8WV19 159 aa13.21□□□□□ -0.29
SHMT2-202ENST00000414700 SLC25A28Q96A46 364 aa13.21□□□□□ -0.29
SHMT2-202ENST00000414700 KLK11Q9UBX7 282 aa13.21□□□□□ -0.29
SHMT2-202ENST00000414700 EDARQ9UNE0 448 aa13.21□□□□□ -0.29
SHMT2-202ENST00000414700 CELSR2Q9HCU4 2923 aa13.21□□□□□ -0.29
SHMT2-202ENST00000414700 FOSL1P15407 271 aa13.2□□□□□ -0.3
SHMT2-202ENST00000414700 SELEP16581 610 aa13.2□□□□□ -0.3
SHMT2-202ENST00000414700 PTH2RP49190 550 aa13.2□□□□□ -0.3
SHMT2-202ENST00000414700 CNN3Q15417 329 aaKnown RBP13.2□□□□□ -0.3
SHMT2-202ENST00000414700 SWI5Q1ZZU3 235 aa13.2□□□□□ -0.3
SHMT2-202ENST00000414700 CEACAM21Q3KPI0 293 aa13.2□□□□□ -0.3
SHMT2-202ENST00000414700 DHRS7BQ6IAN0 325 aaPredicted RBP13.2□□□□□ -0.3
SHMT2-202ENST00000414700 FAAP20Q6NZ36 180 aa13.2□□□□□ -0.3
SHMT2-202ENST00000414700 C1QL2Q7Z5L3 287 aa13.2□□□□□ -0.3
SHMT2-202ENST00000414700 PUSL1Q8N0Z8 303 aaKnown RBP13.2□□□□□ -0.3
SHMT2-202ENST00000414700 DMBX1Q8NFW5 382 aa13.2□□□□□ -0.3
SHMT2-202ENST00000414700 OR51D1Q8NGF3 324 aa13.2□□□□□ -0.3
SHMT2-202ENST00000414700 MRPL24Q96A35 216 aaKnown RBP13.2□□□□□ -0.3
SHMT2-202ENST00000414700 STEAP1Q9UHE8 339 aa13.2□□□□□ -0.3
SHMT2-202ENST00000414700 RNF115Q9Y4L5 304 aa13.2□□□□□ -0.3
SHMT2-202ENST00000414700 RAB19A4D1S5 217 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms