RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 OR52H1Q8NGJ2 320 aa8.5□□□□□ -1.05
DDB1-202ENST00000414411 APOBEC3DQ96AK3 386 aaPredicted RBP8.5□□□□□ -1.05
DDB1-202ENST00000414411 TMEM59Q9BXS4 323 aa8.5□□□□□ -1.05
DDB1-202ENST00000414411 KCNN3Q9UGI6 736 aa8.5□□□□□ -1.05
DDB1-202ENST00000414411 ANAPC10Q9UM13 185 aa8.5□□□□□ -1.05
DDB1-202ENST00000414411 PLEKHA6Q9Y2H5 1048 aa8.5□□□□□ -1.05
DDB1-202ENST00000414411 AKAP6Q13023 2319 aa8.5□□□□□ -1.05
DDB1-202ENST00000414411 FXYD6-FXYD2A0A087WZ82 144 aa8.5□□□□□ -1.05
DDB1-202ENST00000414411 A1L4Q6 167 aa8.5□□□□□ -1.05
DDB1-202ENST00000414411 DHRS3O75911 302 aa8.5□□□□□ -1.05
DDB1-202ENST00000414411 HLA-AP01891 365 aaKnown RBP8.5□□□□□ -1.05
DDB1-202ENST00000414411 PRF1P14222 555 aa8.5□□□□□ -1.05
DDB1-202ENST00000414411 HIST1H1DP16402 221 aaKnown RBP8.5□□□□□ -1.05
DDB1-202ENST00000414411 S100A11P31949 105 aa8.5□□□□□ -1.05
DDB1-202ENST00000414411 THBS4P35443 961 aa8.5□□□□□ -1.05
DDB1-202ENST00000414411 FAM189A2Q15884 450 aa8.5□□□□□ -1.05
DDB1-202ENST00000414411 PLAC9Q5JTB6 97 aa8.5□□□□□ -1.05
DDB1-202ENST00000414411 CLVS2Q5SYC1 327 aa8.5□□□□□ -1.05
DDB1-202ENST00000414411 LPCAT3Q6P1A2 487 aa8.5□□□□□ -1.05
DDB1-202ENST00000414411 Q6ZSR3 168 aa8.5□□□□□ -1.05
DDB1-202ENST00000414411 RFPL4BQ6ZWI9 263 aa8.5□□□□□ -1.05
DDB1-202ENST00000414411 SLC25A42Q86VD7 318 aa8.5□□□□□ -1.05
DDB1-202ENST00000414411 C1orf174Q8IYL3 243 aa8.5□□□□□ -1.05
DDB1-202ENST00000414411 NUP37Q8NFH4 326 aa8.5□□□□□ -1.05
DDB1-202ENST00000414411 OR5M8Q8NGP6 311 aa8.5□□□□□ -1.05
DDB1-202ENST00000414411 SPSB4Q96A44 273 aa8.5□□□□□ -1.05
DDB1-202ENST00000414411 SGK3Q96BR1 496 aa8.5□□□□□ -1.05
DDB1-202ENST00000414411 RAB3CQ96E17 227 aa8.5□□□□□ -1.05
DDB1-202ENST00000414411 GPER1Q99527 375 aa8.5□□□□□ -1.05
DDB1-202ENST00000414411 GSX2Q9BZM3 304 aa8.5□□□□□ -1.05
DDB1-202ENST00000414411 FXYD6Q9H0Q3 95 aa8.5□□□□□ -1.05
DDB1-202ENST00000414411 BANF2Q9H503 90 aa8.5□□□□□ -1.05
DDB1-202ENST00000414411 V9GYS6 101 aa8.5□□□□□ -1.05
DDB1-202ENST00000414411 SPG11Q96JI7 2443 aa8.49□□□□□ -1.05
DDB1-202ENST00000414411 A0A1W2PP11 408 aa8.49□□□□□ -1.05
DDB1-202ENST00000414411 B9A039 149 aa8.49□□□□□ -1.05
DDB1-202ENST00000414411 SOCS1O15524 211 aa8.49□□□□□ -1.05
DDB1-202ENST00000414411 CD3EP07766 207 aa8.49□□□□□ -1.05
DDB1-202ENST00000414411 TUBG1P23258 451 aa8.49□□□□□ -1.05
DDB1-202ENST00000414411 GLRXP35754 106 aa8.49□□□□□ -1.05
DDB1-202ENST00000414411 GMFBP60983 142 aa8.49□□□□□ -1.05
DDB1-202ENST00000414411 RAB14P61106 215 aa8.49□□□□□ -1.05
DDB1-202ENST00000414411 HLXQ14774 488 aaPredicted RBP8.49□□□□□ -1.05
DDB1-202ENST00000414411 NHLRC3Q5JS37 347 aa8.49□□□□□ -1.05
DDB1-202ENST00000414411 CRIP3Q6Q6R5 217 aa8.49□□□□□ -1.05
DDB1-202ENST00000414411 PNLDC1Q8NA58 520 aaKnown RBP8.49□□□□□ -1.05
DDB1-202ENST00000414411 OR56B1Q8NGI3 324 aa8.49□□□□□ -1.05
DDB1-202ENST00000414411 ANGPTL6Q8NI99 470 aa8.49□□□□□ -1.05
DDB1-202ENST00000414411 TMEM171Q8WVE6 324 aa8.49□□□□□ -1.05
DDB1-202ENST00000414411 PP6455Q8WZ26 134 aa8.49□□□□□ -1.05
DDB1-202ENST00000414411 MARS2Q96GW9 593 aaKnown RBP8.49□□□□□ -1.05
DDB1-202ENST00000414411 BCL2L14Q9BZR8 327 aa8.49□□□□□ -1.05
DDB1-202ENST00000414411 CHST5Q9GZS9 411 aa8.49□□□□□ -1.05
DDB1-202ENST00000414411 TUBG2Q9NRH3 451 aa8.49□□□□□ -1.05
DDB1-202ENST00000414411 FBN2P35556 2912 aa8.49□□□□□ -1.05
DDB1-202ENST00000414411 TRAV14DV4A0A0A6YYC5 116 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 RFPL4AA6NLU0 287 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 A6NNC1 897 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 OR2AT4A6NND4 320 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 RFPL4AL1F8VTS6 287 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 MFNGO00587 321 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 RP2O75695 350 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 CRTAPO75718 401 aaPredicted RBP8.48□□□□□ -1.05
DDB1-202ENST00000414411 PLAUP00749 431 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 CD8AP01732 235 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 RPA2P15927 270 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 FAHP16930 419 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 ZBTB25P24278 435 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 CD34P28906 385 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 ALDH3B1P43353 468 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 TMEM50BP56557 158 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 PPP1CBP62140 327 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 RPS27AP62979 156 aaKnown RBP8.48□□□□□ -1.05
DDB1-202ENST00000414411 SRSF4Q08170 494 aaKnown RBP8.48□□□□□ -1.05
DDB1-202ENST00000414411 GK2Q14410 553 aaPredicted RBP8.48□□□□□ -1.05
DDB1-202ENST00000414411 KISS1Q15726 138 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 PNLIPRP3Q17RR3 467 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 MSMPQ1L6U9 139 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 TOR2AQ5JU69 321 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 LIN54Q6MZP7 749 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 ADAM5Q6NVV9 412 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 FAHD2BQ6P2I3 314 aaPredicted RBP8.48□□□□□ -1.05
DDB1-202ENST00000414411 SLC22A25Q6T423 547 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 UNQ6126/PRO20091Q6UXV3 157 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 TMUB2Q71RG4 321 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 LYG2Q86SG7 212 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 OR5L1Q8NGL2 311 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 PCNPQ8WW12 178 aaKnown RBP8.48□□□□□ -1.05
DDB1-202ENST00000414411 PIK3IP1Q96FE7 263 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 FAHD2AQ96GK7 314 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 URM1Q9BTM9 101 aaKnown RBP8.48□□□□□ -1.05
DDB1-202ENST00000414411 ARL6Q9H0F7 186 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 CST11Q9H112 138 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 OR10A2Q9H208 303 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 OR51B6Q9H340 312 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 GHRLQ9UBU3 117 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 NOP16Q9Y3C1 178 aaKnown RBP8.48□□□□□ -1.05
DDB1-202ENST00000414411 RNF115Q9Y4L5 304 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 HECTD1Q9ULT8 2610 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 NBPF19A0A087WUL8 3843 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms