RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 PSMB9P28065 219 aa2.77□□□□□ -1.97
HMGB3P31-201ENST00000413333 IMPA1P29218 277 aa2.77□□□□□ -1.97
HMGB3P31-201ENST00000413333 KDELR2P33947 212 aa2.77□□□□□ -1.97
HMGB3P31-201ENST00000413333 MPV17P39210 176 aa2.77□□□□□ -1.97
HMGB3P31-201ENST00000413333 LGALS7P47929 136 aa2.77□□□□□ -1.97
HMGB3P31-201ENST00000413333 HBG1P69891 147 aa2.77□□□□□ -1.97
HMGB3P31-201ENST00000413333 HBG2P69892 147 aa2.77□□□□□ -1.97
HMGB3P31-201ENST00000413333 TMEM241Q24JQ0 296 aa2.77□□□□□ -1.97
HMGB3P31-201ENST00000413333 TTMPQ5BVD1 217 aa2.77□□□□□ -1.97
HMGB3P31-201ENST00000413333 TPGS1Q6ZTW0 290 aa2.77□□□□□ -1.97
HMGB3P31-201ENST00000413333 HMGN2P46Q86SG4 172 aa2.77□□□□□ -1.97
HMGB3P31-201ENST00000413333 CRLF3Q8IUI8 442 aa2.77□□□□□ -1.97
HMGB3P31-201ENST00000413333 APCDD1LQ8NCL9 501 aa2.77□□□□□ -1.97
HMGB3P31-201ENST00000413333 ACTL9Q8TC94 416 aa2.77□□□□□ -1.97
HMGB3P31-201ENST00000413333 TWIST2Q8WVJ9 160 aa2.77□□□□□ -1.97
HMGB3P31-201ENST00000413333 LRRC45Q96CN5 670 aa2.77□□□□□ -1.97
HMGB3P31-201ENST00000413333 PPP1R36Q96LQ0 422 aa2.77□□□□□ -1.97
HMGB3P31-201ENST00000413333 YPEL4Q96NS1 127 aa2.77□□□□□ -1.97
HMGB3P31-201ENST00000413333 BIRC8Q96P09 236 aa2.77□□□□□ -1.97
HMGB3P31-201ENST00000413333 RSPO3Q9BXY4 272 aaPredicted RBP2.77□□□□□ -1.97
HMGB3P31-201ENST00000413333 ZNF436Q9C0F3 470 aaPredicted RBP2.77□□□□□ -1.97
HMGB3P31-201ENST00000413333 LHX5Q9H2C1 402 aa2.77□□□□□ -1.97
HMGB3P31-201ENST00000413333 TAC3Q9UHF0 121 aa2.77□□□□□ -1.97
HMGB3P31-201ENST00000413333 TRIP11Q15643 1979 aa2.76□□□□□ -1.97
HMGB3P31-201ENST00000413333 PGPA6NDG6 321 aa2.76□□□□□ -1.97
HMGB3P31-201ENST00000413333 ZNF98A6NK75 572 aa2.76□□□□□ -1.97
HMGB3P31-201ENST00000413333 CLDN34H7C241 214 aa2.76□□□□□ -1.97
HMGB3P31-201ENST00000413333 I3L4J1 428 aa2.76□□□□□ -1.97
HMGB3P31-201ENST00000413333 FFAR1O14842 300 aa2.76□□□□□ -1.97
HMGB3P31-201ENST00000413333 GYG2O15488 501 aa2.76□□□□□ -1.97
HMGB3P31-201ENST00000413333 PRTN3P24158 256 aa2.76□□□□□ -1.97
HMGB3P31-201ENST00000413333 TEAD1P28347 426 aa2.76□□□□□ -1.97
HMGB3P31-201ENST00000413333 SLC6A1P30531 599 aa2.76□□□□□ -1.97
HMGB3P31-201ENST00000413333 TSPOP30536 169 aa2.76□□□□□ -1.97
HMGB3P31-201ENST00000413333 NUDT2P50583 147 aa2.76□□□□□ -1.97
HMGB3P31-201ENST00000413333 PRDX1Q06830 199 aaKnown RBP2.76□□□□□ -1.97
HMGB3P31-201ENST00000413333 BAXQ07812 192 aa2.76□□□□□ -1.97
HMGB3P31-201ENST00000413333 FAM131AQ6UXB0 335 aa2.76□□□□□ -1.97
HMGB3P31-201ENST00000413333 SSX7Q7RTT5 188 aa2.76□□□□□ -1.97
HMGB3P31-201ENST00000413333 DAZ4Q86SG3 579 aaKnown RBP2.76□□□□□ -1.97
HMGB3P31-201ENST00000413333 RNF182Q8N6D2 247 aa2.76□□□□□ -1.97
HMGB3P31-201ENST00000413333 ZNF555Q8NEP9 628 aa2.76□□□□□ -1.97
HMGB3P31-201ENST00000413333 ATP6V1C2Q8NEY4 427 aa2.76□□□□□ -1.97
HMGB3P31-201ENST00000413333 RNASEH2CQ8TDP1 164 aaKnown RBP2.76□□□□□ -1.97
HMGB3P31-201ENST00000413333 PHF10Q8WUB8 498 aaKnown RBP2.76□□□□□ -1.97
HMGB3P31-201ENST00000413333 ITLN2Q8WWU7 325 aaPredicted RBP2.76□□□□□ -1.97
HMGB3P31-201ENST00000413333 RBPMSQ93062 196 aaKnown RBP2.76□□□□□ -1.97
HMGB3P31-201ENST00000413333 ZNF2Q9BSG1 426 aaPredicted RBP2.76□□□□□ -1.97
HMGB3P31-201ENST00000413333 MFSD1Q9H3U5 465 aa2.76□□□□□ -1.97
HMGB3P31-201ENST00000413333 DAZ1Q9NQZ3 744 aaKnown RBP2.76□□□□□ -1.97
HMGB3P31-201ENST00000413333 TMEM38BQ9NVV0 291 aa2.76□□□□□ -1.97
HMGB3P31-201ENST00000413333 IL37Q9NZH6 218 aa2.76□□□□□ -1.97
HMGB3P31-201ENST00000413333 USP42Q9H9J4 1324 aaKnown RBP2.75□□□□□ -1.97
HMGB3P31-201ENST00000413333 A8MUU9 505 aa2.75□□□□□ -1.97
HMGB3P31-201ENST00000413333 MKRN2OSH3BPM6 223 aa2.75□□□□□ -1.97
HMGB3P31-201ENST00000413333 SLC37A4O43826 429 aa2.75□□□□□ -1.97
HMGB3P31-201ENST00000413333 CALUO43852 315 aaPredicted RBP2.75□□□□□ -1.97
HMGB3P31-201ENST00000413333 IGHV1-46P01743 117 aa2.75□□□□□ -1.97
HMGB3P31-201ENST00000413333 SOD3P08294 240 aa2.75□□□□□ -1.97
HMGB3P31-201ENST00000413333 OR5AC1P0C628 307 aa2.75□□□□□ -1.97
HMGB3P31-201ENST00000413333 SCGB1C2P0DMR2 95 aa2.75□□□□□ -1.97
HMGB3P31-201ENST00000413333 IDH2P48735 452 aaKnown RBP2.75□□□□□ -1.97
HMGB3P31-201ENST00000413333 SKP1P63208 163 aa2.75□□□□□ -1.97
HMGB3P31-201ENST00000413333 SLAMF1Q13291 335 aa2.75□□□□□ -1.97
HMGB3P31-201ENST00000413333 LY6EQ16553 131 aa2.75□□□□□ -1.97
HMGB3P31-201ENST00000413333 LINC00303Q3SY05 128 aa2.75□□□□□ -1.97
HMGB3P31-201ENST00000413333 RBM48Q5RL73 367 aaKnown RBP2.75□□□□□ -1.97
HMGB3P31-201ENST00000413333 NXNL2Q5VZ03 156 aa2.75□□□□□ -1.97
HMGB3P31-201ENST00000413333 TBPL2Q6SJ96 375 aa2.75□□□□□ -1.97
HMGB3P31-201ENST00000413333 CASP12Q6UXS9 341 aa2.75□□□□□ -1.97
HMGB3P31-201ENST00000413333 GATD1Q8NB37 220 aa2.75□□□□□ -1.97
HMGB3P31-201ENST00000413333 OR2K2Q8NGT1 345 aa2.75□□□□□ -1.97
HMGB3P31-201ENST00000413333 FAM45AQ8TCE6 357 aa2.75□□□□□ -1.97
HMGB3P31-201ENST00000413333 SCGB1C1Q8TD33 95 aa2.75□□□□□ -1.97
HMGB3P31-201ENST00000413333 RORBQ92753 470 aa2.75□□□□□ -1.97
HMGB3P31-201ENST00000413333 FXYD5Q96DB9 178 aa2.75□□□□□ -1.97
HMGB3P31-201ENST00000413333 RMI2Q96E14 147 aa2.75□□□□□ -1.97
HMGB3P31-201ENST00000413333 MRAP2Q96G30 205 aa2.75□□□□□ -1.97
HMGB3P31-201ENST00000413333 THTPAQ9BU02 230 aa2.75□□□□□ -1.97
HMGB3P31-201ENST00000413333 C1orf50Q9BV19 199 aa2.75□□□□□ -1.97
HMGB3P31-201ENST00000413333 SUCNR1Q9BXA5 334 aa2.75□□□□□ -1.97
HMGB3P31-201ENST00000413333 UPF3BQ9BZI7 483 aaKnown RBP2.75□□□□□ -1.97
HMGB3P31-201ENST00000413333 TSGA10Q9BZW7 698 aa2.75□□□□□ -1.97
HMGB3P31-201ENST00000413333 FBXL15Q9H469 300 aa2.75□□□□□ -1.97
HMGB3P31-201ENST00000413333 DHX35Q9H5Z1 703 aaKnown RBP2.75□□□□□ -1.97
HMGB3P31-201ENST00000413333 FBXL3Q9UKT7 428 aa2.75□□□□□ -1.97
HMGB3P31-201ENST00000413333 SLC22A7Q9Y694 548 aa2.75□□□□□ -1.97
HMGB3P31-201ENST00000413333 TRAV8-3A0A0A6YYJ7 113 aa2.74□□□□□ -1.97
HMGB3P31-201ENST00000413333 ZNF233A6NK53 670 aa2.74□□□□□ -1.97
HMGB3P31-201ENST00000413333 CD300LBA8K4G0 201 aa2.74□□□□□ -1.97
HMGB3P31-201ENST00000413333 ENTPD6O75354 484 aa2.74□□□□□ -1.97
HMGB3P31-201ENST00000413333 CECR9P0C854 216 aa2.74□□□□□ -1.97
HMGB3P31-201ENST00000413333 LIMS3P0CW19 117 aa2.74□□□□□ -1.97
HMGB3P31-201ENST00000413333 LIMS4P0CW20 117 aa2.74□□□□□ -1.97
HMGB3P31-201ENST00000413333 SLC2A1P11166 492 aa2.74□□□□□ -1.97
HMGB3P31-201ENST00000413333 SPNP16150 400 aa2.74□□□□□ -1.97
HMGB3P31-201ENST00000413333 TGM4P49221 684 aa2.74□□□□□ -1.97
HMGB3P31-201ENST00000413333 GDI2P50395 445 aaKnown RBP2.74□□□□□ -1.97
HMGB3P31-201ENST00000413333 PLTPP55058 493 aa2.74□□□□□ -1.97
HMGB3P31-201ENST00000413333 RHOAP61586 193 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms