RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 HLA-BQ31612 363 aa16.43■□□□□ 0.22
TNFRSF8-202ENST00000413146 TMEM211Q6ICI0 200 aa16.43■□□□□ 0.22
TNFRSF8-202ENST00000413146 TMEM182Q6ZP80 229 aaPredicted RBP16.43■□□□□ 0.22
TNFRSF8-202ENST00000413146 OR4D5Q8NGN0 318 aa16.43■□□□□ 0.22
TNFRSF8-202ENST00000413146 KCNE4Q8WWG9 221 aa16.43■□□□□ 0.22
TNFRSF8-202ENST00000413146 C20orf24Q9BUV8 137 aa16.43■□□□□ 0.22
TNFRSF8-202ENST00000413146 SDK2Q58EX2 2172 aa16.43■□□□□ 0.22
TNFRSF8-202ENST00000413146 ZNF716A6NP11 495 aa16.43■□□□□ 0.22
TNFRSF8-202ENST00000413146 OR7C1O76099 320 aaPredicted RBP16.43■□□□□ 0.22
TNFRSF8-202ENST00000413146 PPYP01298 95 aa16.43■□□□□ 0.22
TNFRSF8-202ENST00000413146 FUT3P21217 361 aa16.43■□□□□ 0.22
TNFRSF8-202ENST00000413146 PCBD1P61457 104 aa16.43■□□□□ 0.22
TNFRSF8-202ENST00000413146 B2MP61769 119 aa16.43■□□□□ 0.22
TNFRSF8-202ENST00000413146 SRPXP78539 464 aa16.43■□□□□ 0.22
TNFRSF8-202ENST00000413146 ZNF468Q5VIY5 522 aaPredicted RBP16.43■□□□□ 0.22
TNFRSF8-202ENST00000413146 IP6K3Q96PC2 410 aa16.43■□□□□ 0.22
TNFRSF8-202ENST00000413146 TECTBQ96PL2 329 aa16.43■□□□□ 0.22
TNFRSF8-202ENST00000413146 WNT5BQ9H1J7 359 aa16.43■□□□□ 0.22
TNFRSF8-202ENST00000413146 TUBA4BQ9H853 241 aa16.43■□□□□ 0.22
TNFRSF8-202ENST00000413146 ZNF816-ZNF321PA0A0X1KG74 233 aa16.42■□□□□ 0.22
TNFRSF8-202ENST00000413146 C3orf85A0A1B0GTC6 90 aa16.42■□□□□ 0.22
TNFRSF8-202ENST00000413146 EWSR1Q01844 656 aaKnown RBP eCLIP16.42■□□□□ 0.22
TNFRSF8-202ENST00000413146 CEACAM16Q2WEN9 425 aa16.42■□□□□ 0.22
TNFRSF8-202ENST00000413146 KRBOX4Q5JUW0 171 aa16.42■□□□□ 0.22
TNFRSF8-202ENST00000413146 ZNF561Q8N587 486 aa16.42■□□□□ 0.22
TNFRSF8-202ENST00000413146 LFNGQ8NES3 379 aa16.42■□□□□ 0.22
TNFRSF8-202ENST00000413146 FAM213BQ8TBF2 198 aa16.42■□□□□ 0.22
TNFRSF8-202ENST00000413146 BOD1Q96IK1 185 aa16.42■□□□□ 0.22
TNFRSF8-202ENST00000413146 KCNJ16Q9NPI9 418 aa16.42■□□□□ 0.22
TNFRSF8-202ENST00000413146 FBXO7Q9Y3I1 522 aa16.42■□□□□ 0.22
TNFRSF8-202ENST00000413146 CNTRLQ7Z7A1 2325 aa16.42■□□□□ 0.22
TNFRSF8-202ENST00000413146 CFAP54Q96N23 3096 aa16.42■□□□□ 0.22
TNFRSF8-202ENST00000413146 CXCL13O43927 109 aa16.42■□□□□ 0.22
TNFRSF8-202ENST00000413146 EIF2S3LQ2VIR3 472 aaKnown RBP16.42■□□□□ 0.22
TNFRSF8-202ENST00000413146 Q6ZPA2 131 aa16.42■□□□□ 0.22
TNFRSF8-202ENST00000413146 GGNQ86UU5 652 aa16.42■□□□□ 0.22
TNFRSF8-202ENST00000413146 OR2Y1Q8NGV0 311 aa16.42■□□□□ 0.22
TNFRSF8-202ENST00000413146 ISOC2Q96AB3 205 aa16.42■□□□□ 0.22
TNFRSF8-202ENST00000413146 CLDN23Q96B33 292 aa16.42■□□□□ 0.22
TNFRSF8-202ENST00000413146 PARPBPQ9NWS1 579 aa16.42■□□□□ 0.22
TNFRSF8-202ENST00000413146 A0A0G2JMM0 328 aa16.41■□□□□ 0.22
TNFRSF8-202ENST00000413146 A0A1W2PPB8 328 aa16.41■□□□□ 0.22
TNFRSF8-202ENST00000413146 A0A1W2PPH5 198 aa16.41■□□□□ 0.22
TNFRSF8-202ENST00000413146 A0A1W2PRS3 328 aa16.41■□□□□ 0.22
TNFRSF8-202ENST00000413146 KIR3DP1A8MWS1 328 aa16.41■□□□□ 0.22
TNFRSF8-202ENST00000413146 PRSS44E7EML9 344 aa16.41■□□□□ 0.22
TNFRSF8-202ENST00000413146 MPPED1O15442 326 aa16.41■□□□□ 0.22
TNFRSF8-202ENST00000413146 CDS2O95674 445 aa16.41■□□□□ 0.22
TNFRSF8-202ENST00000413146 P04436 131 aa16.41■□□□□ 0.22
TNFRSF8-202ENST00000413146 NOVA1P51513 510 aaKnown RBP16.41■□□□□ 0.22
TNFRSF8-202ENST00000413146 FAM185AQ8N0U4 392 aa16.41■□□□□ 0.22
TNFRSF8-202ENST00000413146 OR2C3Q8N628 320 aa16.41■□□□□ 0.22
TNFRSF8-202ENST00000413146 ZNF611Q8N823 705 aa16.41■□□□□ 0.22
TNFRSF8-202ENST00000413146 CD300LFQ8TDQ1 290 aa16.41■□□□□ 0.22
TNFRSF8-202ENST00000413146 HLA-CQ95604 372 aa16.41■□□□□ 0.22
TNFRSF8-202ENST00000413146 SLC35B3Q9H1N7 401 aa16.41■□□□□ 0.22
TNFRSF8-202ENST00000413146 A6NLC8 198 aa16.41■□□□□ 0.22
TNFRSF8-202ENST00000413146 ACAA1P09110 424 aaPredicted RBP16.41■□□□□ 0.22
TNFRSF8-202ENST00000413146 HOXB1P14653 301 aaPredicted RBP16.41■□□□□ 0.22
TNFRSF8-202ENST00000413146 RHEBQ15382 184 aa16.41■□□□□ 0.22
TNFRSF8-202ENST00000413146 FGFBP3Q8TAT2 258 aa16.41■□□□□ 0.22
TNFRSF8-202ENST00000413146 SGCZQ96LD1 299 aa16.41■□□□□ 0.22
TNFRSF8-202ENST00000413146 FAM86C1Q9NVL1 165 aa16.41■□□□□ 0.22
TNFRSF8-202ENST00000413146 SHANK1Q9Y566 2161 aa16.41■□□□□ 0.22
TNFRSF8-202ENST00000413146 A0A1B0GV50 99 aa16.4■□□□□ 0.22
TNFRSF8-202ENST00000413146 MED19A0JLT2 244 aaPredicted RBP16.4■□□□□ 0.22
TNFRSF8-202ENST00000413146 C5orf52A6NGY3 159 aa16.4■□□□□ 0.22
TNFRSF8-202ENST00000413146 TRDCB7Z8K6 153 aa16.4■□□□□ 0.22
TNFRSF8-202ENST00000413146 DAOP14920 347 aa16.4■□□□□ 0.22
TNFRSF8-202ENST00000413146 ZNF14P17017 642 aaPredicted RBP16.4■□□□□ 0.22
TNFRSF8-202ENST00000413146 PMELP40967 661 aa16.4■□□□□ 0.22
TNFRSF8-202ENST00000413146 ASCL1P50553 236 aa16.4■□□□□ 0.22
TNFRSF8-202ENST00000413146 ZNF266Q14584 549 aa16.4■□□□□ 0.22
TNFRSF8-202ENST00000413146 TGIF1Q15583 401 aa16.4■□□□□ 0.22
TNFRSF8-202ENST00000413146 IGSF11Q5DX21 431 aa16.4■□□□□ 0.22
TNFRSF8-202ENST00000413146 SLC25A26Q70HW3 274 aa16.4■□□□□ 0.22
TNFRSF8-202ENST00000413146 DPPA2Q7Z7J5 298 aa16.4■□□□□ 0.22
TNFRSF8-202ENST00000413146 CALHM1Q8IU99 346 aa16.4■□□□□ 0.22
TNFRSF8-202ENST00000413146 BATF2Q8N1L9 274 aa16.4■□□□□ 0.22
TNFRSF8-202ENST00000413146 OR1J1Q8NGS3 322 aa16.4■□□□□ 0.22
TNFRSF8-202ENST00000413146 TAAR9Q96RI9 348 aa16.4■□□□□ 0.22
TNFRSF8-202ENST00000413146 CDX2Q99626 313 aaPredicted RBP16.4■□□□□ 0.22
TNFRSF8-202ENST00000413146 TMEM222Q9H0R3 208 aa16.4■□□□□ 0.22
TNFRSF8-202ENST00000413146 P4HTMQ9NXG6 502 aa16.4■□□□□ 0.22
TNFRSF8-202ENST00000413146 NCKAP5O14513 1909 aa16.4■□□□□ 0.22
TNFRSF8-202ENST00000413146 NKX2-6A6NCS4 301 aa16.4■□□□□ 0.22
TNFRSF8-202ENST00000413146 K7N7A8 449 aa16.4■□□□□ 0.22
TNFRSF8-202ENST00000413146 S100A8P05109 93 aa16.4■□□□□ 0.22
TNFRSF8-202ENST00000413146 CCL4P13236 92 aa16.4■□□□□ 0.22
TNFRSF8-202ENST00000413146 AGAP20933 346 aa16.4■□□□□ 0.22
TNFRSF8-202ENST00000413146 LMO1P25800 156 aa16.4■□□□□ 0.22
TNFRSF8-202ENST00000413146 PPP1CCP36873 323 aaKnown RBP16.4■□□□□ 0.22
TNFRSF8-202ENST00000413146 FOLR3P41439 243 aa16.4■□□□□ 0.22
TNFRSF8-202ENST00000413146 NKX2-1P43699 371 aaPredicted RBP16.4■□□□□ 0.22
TNFRSF8-202ENST00000413146 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.4■□□□□ 0.22
TNFRSF8-202ENST00000413146 SLC39A7Q92504 469 aa16.4■□□□□ 0.22
TNFRSF8-202ENST00000413146 SPIN2AQ99865 258 aa16.4■□□□□ 0.22
TNFRSF8-202ENST00000413146 SPIN2BQ9BPZ2 258 aa16.4■□□□□ 0.22
TNFRSF8-202ENST00000413146 UBE2J1Q9Y385 318 aaPredicted RBP16.4■□□□□ 0.22
TNFRSF8-202ENST00000413146 FAM24AA6NFZ4 105 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms